contig_metadata
5 rows where bioproject = "PRJNA559720" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13884209 | 13884209 | PRJNA559720_P_NODE_11351_length_284_cov_1.075829_g11212_i0 | PRJNA559720 | 11351 | 284 | 1.075829 | 3.05535436 | Schlesneria | 656899 | Bacteria | Bacteria | 525 | 1.2899999999999994e-144 | NTclustered | gi|12583970|gb|AF245374.1|AF245374 | 149589 | g11212 | i0 | 100 | 181.87323943662 | 284 | 0 | 100 | 0 | 1 | 284 | 2534 | 2817 | Planctomycete str. 639 23S ribosomal RNA gene, partial sequence | blastn | 51652 | 525 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | planctomycete str. 639 | ||
| 28910273 | 28910273 | PRJNA559720_P_NODE_16168_length_242_cov_0.911243_g16029_i0 | PRJNA559720 | 16168 | 242 | 0.911243 | 2.20520806 | Waddlia chondrophila | 71667 | Bacteria | Bacteria | 42.4 | 0.0488 | NR | WP_013182342.1 | 71667 | g16029 | i0 | 65.4 | 0.322314049586777 | 26 | 5 | 27.3 | 1 | 230 | 165 | 131 | 156 | WP_013182342.1 MFS transporter [Waddlia chondrophila] | diamond | 78 | 42.4 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Waddliaceae | Waddlia | Waddlia chondrophila | |
| 29384301 | 29384301 | PRJNA559720_P_NODE_8589_length_340_cov_1.101124_g8450_i0 | PRJNA559720 | 8589 | 340 | 1.101124 | 3.7438216 | Chthoniobacterales bacterium | 2201154 | Bacteria | Bacteria | 43.9 | 0.0403 | NR | MFL6529243.1 | 2201154 | g8450 | i0 | 36.6 | 0.361764705882353 | 41 | 26 | 36.2 | 0 | 87 | 209 | 196 | 236 | MFL6529243.1 chromate efflux transporter [Chthoniobacterales bacterium] | diamond | 123 | 43.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacterales bacterium | |||
| 30047176 | 30047176 | PRJNA559720_P_NODE_15371_length_244_cov_2.187135_g15232_i0 | PRJNA559720 | 15371 | 244 | 2.187135 | 5.3366094 | Phycisphaerae bacterium | 2026778 | Bacteria | Bacteria | 63.9 | 1.3e-9 | NR | MBN1342782.1 | 2026778 | g15232 | i0 | 54 | 1.27868852459016 | 50 | 23 | 61.5 | 0 | 243 | 94 | 746 | 795 | MBN1342782.1 PAS domain S-box protein [Phycisphaerae bacterium] | diamond | 312 | 63.9 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerae bacterium | ||||
| 31627508 | 31627508 | PRJNA559720_P_NODE_13416_length_252_cov_1.206704_g13277_i0 | PRJNA559720 | 13416 | 252 | 1.206704 | 3.04089408 | Puniceicoccales bacterium | 2478473 | Bacteria | Bacteria | 45.1 | 0.006 | NR | MDR0418280.1 | 2478473 | g13277 | i0 | 46 | 0.595238095238095 | 50 | 26 | 58.3 | 1 | 36 | 182 | 287 | 336 | MDR0418280.1 tRNA 2-thiouridine(34) synthase MnmA [Puniceicoccales bacterium] | diamond | 150 | 45.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Puniceicoccales | Puniceicoccales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;