RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA559720", tax_clade = "Cyanobacteriota/Melainabacteria group" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 2 ✖

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 2 ✖

bioproject 1

  • PRJNA559720 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29100121 29100121 PRJNA559720_P_NODE_14708_length_247_cov_0.885057_g14569_i0 PRJNA559720 14708 247 0.885057 2.18609079 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 124 5.63e-31   NR MBY0357756.1 2364082 g14569 i0 71.3 1.94331983805668 80 23 97.2 0 245 6 175 254 MBY0357756.1 ATP-binding protein [Candidatus Obscuribacterales bacterium] diamond 480 124 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
32891391 32891391 PRJNA559720_P_NODE_16420_length_241_cov_0.916667_g16281_i0 PRJNA559720 16420 241 0.916667 2.20916747 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 106 6.08e-25   NR MBY0548625.1 2364082 g16281 i0 63.3 2.95020746887967 79 29 98.3 0 3 239 241 319 MBY0548625.1 cytosine permease [Candidatus Obscuribacterales bacterium] diamond 711 106 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;