RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA558770" and tax_phylum = "Negarnaviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJNA558770 · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8194051 8194051 PRJNA558770_P_NODE_33527_length_371_cov_8.702381_g31545_i0 PRJNA558770 33527 371 8.702381 32.28583351 Tuta absoluta associated bunya-like virus 1 3399779 Viruses Viruses 73.1 2.71e-8   NTclustered gi|2909951561|gb|PQ655398.1| 3399779 g31545 i0 95.556 0.121293800539084 45 2 12 0 2 46 1865 1909 Tuta absoluta associated bunya-like virus 1 isolate Ta_as_bun RNA-dependent RNA polymerase gene, partial cds blastn 45 73.1 1 Viruses   Orthornavirae Negarnaviricota Ellioviricetes Bunyavirales     Tuta absoluta associated bunya-like virus 1
26635694 26635694 PRJNA558770_P_NODE_69421_length_249_cov_12.855140_g67416_i0 PRJNA558770 69421 249 12.85514 32.0092986 Curvularia pseudobrachyspora bunya-like virus 1 3391148 Viruses Viruses 69.7 1.28e-11   NR XMD53700.1 3391148 g67416 i0 50 1.01204819277108 84 39 97.6 2 4 246 256 339 XMD53700.1 nonstructural protein [Curvularia pseudobrachyspora bunya-like virus 1] diamond 252 69.7 1 Viruses   Orthornavirae Negarnaviricota Ellioviricetes Bunyavirales     Curvularia pseudobrachyspora bunya-like virus 1
28121210 28121210 PRJNA558770_P_NODE_43925_length_320_cov_13.438596_g41927_i0 PRJNA558770 43925 320 13.438596 43.0035072 Coniothyrium diplodiella negative-stranded RNA virus 1 2587545 Viruses Viruses 45.4 0.0101   NR YP_010840596.1 2587545 g41927 i0 45.7 0.43125 46 25 43.1 0 1 138 268 313 YP_010840596.1 NS1 [Coniothyrium diplodiella negative-stranded RNA virus 1] diamond 138 45.4 1 Viruses   Orthornavirae Negarnaviricota Bunyaviricetes Hareavirales Discoviridae Orthodiscovirus Orthodiscovirus coniellae
28847244 28847244 PRJNA558770_P_NODE_57328_length_276_cov_11.435685_g55324_i0 PRJNA558770 57328 276 11.435685 31.5624906 Coniothyrium diplodiella negative-stranded RNA virus 1 2587545 Viruses Viruses 45.4 0.00631   NR YP_010840596.1 2587545 g55324 i0 45.7 0.5 46 25 50 0 276 139 268 313 YP_010840596.1 NS1 [Coniothyrium diplodiella negative-stranded RNA virus 1] diamond 138 45.4 1 Viruses   Orthornavirae Negarnaviricota Bunyaviricetes Hareavirales Discoviridae Orthodiscovirus Orthodiscovirus coniellae
29921112 29921112 PRJNA558770_P_NODE_175391_length_234_cov_4.874372_g173386_i0 PRJNA558770 175391 234 4.874372 11.40603048 Coniothyrium diplodiella negative-stranded RNA virus 1 2587545 Viruses Viruses 73.2 6.34e-13   NR YP_010840597.1 2587545 g173386 i0 51.9 0.987179487179487 77 12 98.7 1 233 3 779 830 YP_010840597.1 MAG: RNA-dependent RNA polymerase [Coniothyrium diplodiella negative-stranded RNA virus 1] diamond 231 73.2 1 Viruses   Orthornavirae Negarnaviricota Bunyaviricetes Hareavirales Discoviridae Orthodiscovirus Orthodiscovirus coniellae
30788090 30788090 PRJNA558770_P_NODE_7014_length_655_cov_26.840323_g5655_i0 PRJNA558770 7014 655 26.840323 175.80411565 Negarnaviricota 2497569 Viruses Viruses 300 5.6999999999999995e-99   NR YP_010840348.1 2737680 g5655 i0 71.6 3.67786259541985 208 55 95.3 1 654 31 117 320 YP_010840348.1 NC [Plasmopara viticola lesion associated mycobunyavirales-like virus 8] diamond 2409 300 1 Viruses   Orthornavirae Negarnaviricota Bunyaviricetes Hareavirales Discoviridae Orthodiscovirus Orthodiscovirus hispaniae
32734201 32734201 PRJNA558770_P_NODE_185780_length_234_cov_4.371859_g183775_i0 PRJNA558770 185780 234 4.371859 10.23015006 Exserohilum turcicum mycobunyavirales-like virus 2 3229032 Viruses Viruses 45.1 0.00517   NR XBY85604.1 3229032 g183775 i0 83.3 0.615384615384615 24 4 30.8 0 73 2 1636 1659 XBY85604.1 MAG: RNA-dependent RNA polymerase [Exserohilum turcicum mycobunyavirales-like virus 2] diamond 144 45.1 1 Viruses   Orthornavirae Negarnaviricota Ellioviricetes Bunyavirales     Exserohilum turcicum mycobunyavirales-like virus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;