RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA558770" and tax_phylum = "Nanobdellota"

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tax_superkingdom 1

tax_phylum 1

  • Nanobdellota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA558770 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27489769 27489769 PRJNA558770_P_NODE_214923_length_234_cov_3.251256_g212918_i0 PRJNA558770 214923 234 3.251256 7.60793904 Nanobdellota archaeon 2026764 Archaea Archaea 77.8 2.03e-15   NR MCA9495766.1 2026764 g212918 i0 49.3 0.961538461538462 75 16 96.2 1 229 5 125 177 MCA9495766.1 DNA cytosine methyltransferase [Nanoarchaeota archaeon] diamond 225 77.8 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
29289376 29289376 PRJNA558770_P_NODE_383749_length_201_cov_6.909639_g381744_i0 PRJNA558770 383749 201 6.909639 13.88837439 Nanobdellota archaeon 2026764 Archaea Archaea 49.7 5.59e-6   NR MEK6882387.1 2026764 g381744 i0 69.2 0.388059701492537 26 8 38.8 0 85 8 1 26 MEK6882387.1 hypothetical protein [Nanoarchaeota archaeon] diamond 78 49.7 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
31184475 31184475 PRJNA558770_P_NODE_288455_length_234_cov_1.597990_g286450_i0 PRJNA558770 288455 234 1.59799 3.7392966 Candidatus Nanoarchaeia archaeon 2910166 Archaea Archaea 44.3 0.00823   NR MDD5651604.1 2910166 g286450 i0 32.9 0.974358974358974 76 20 97.4 1 3 230 201 245 MDD5651604.1 metallophosphoesterase family protein [Candidatus Nanoarchaeia archaeon] diamond 228 44.3 1 Archaea   Nanobdellati Nanobdellota Candidatus Nanoarchaeia       Candidatus Nanoarchaeia archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;