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contig_metadata

20 rows where bioproject = "PRJNA558770" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 20 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA558770 · 20 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3090135 3090135 PRJNA558770_P_NODE_203263_length_234_cov_3.658291_g201258_i0 PRJNA558770 203263 234 3.658291 8.56040094 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.021   NTclustered gi|2912981848|dbj|AP039587.1| 145626 g201258 i0 100 0.11965811965812 28 0 12 0 179 206 59464940 59464967 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 6, sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
4368750 4368750 PRJNA558770_P_NODE_365744_length_232_cov_2.644670_g363739_i0 PRJNA558770 365744 232 2.64467 6.1356344 Siphonaria sp. UF 303783 1483308 Mollusca Mollusca 52.8 0.021   NTclustered gi|604857464|gb|KF000805.1| 1483308 g363739 i0 100 0.120689655172414 28 0 12 0 41 68 104 131 Siphonaria sp. UF 303783 clone 850-1 cytochrome c oxidase subunit I (COI) gene, partial cds; mitochondrial blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Siphonariida Siphonariidae Siphonaria Siphonaria sp. UF 303783
6917003 6917003 PRJNA558770_P_NODE_19126_length_452_cov_18.268585_g17279_i0 PRJNA558770 19126 452 18.268585 82.5740042 Bradybaena similaris 145626 Mollusca Mollusca 63.9 2.02e-5   NTclustered gi|2912999222|dbj|AP039605.1| 145626 g17279 i0 100 9.44247787610619 34 0 15 0 1 34 21032981 21033014 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 24, sequence blastn 4268 63.9 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
6920483 6920483 PRJNA558770_P_NODE_64246_length_260_cov_4.831111_g62241_i0 PRJNA558770 64246 260 4.831111 12.5608886 Octopus bimaculoides 37653 Mollusca Mollusca 52.8 0.024   NTclustered gi|2427252258|ref|XM_014928244.2| 37653 g62241 i0 100 0.646153846153846 28 0 11 0 188 215 9395 9422 PREDICTED: Octopus bimaculoides receptor-type tyrosine-protein phosphatase T (LOC106878895), transcript variant X5, mRNA blastn 168 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus bimaculoides
12017668 12017668 PRJNA558770_P_NODE_17350_length_470_cov_3.126437_g15530_i0 PRJNA558770 17350 470 3.126437 14.6942539 Ylistrum balloti 509963 Mollusca Mollusca 52.8 0.046   NTclustered gi|2592069921|ref|XM_060214807.1| 509963 g15530 i0 100 0.0595744680851064 28 0 6 0 51 78 13169 13196 PREDICTED: Ylistrum balloti protocadherin Fat 1-like (LOC132550716), partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Ylistrum Ylistrum balloti
12017866 12017866 PRJNA558770_P_NODE_183390_length_234_cov_4.482412_g181385_i0 PRJNA558770 183390 234 4.482412 10.48884408 Ostrea edulis 37623 Mollusca Mollusca 52.8 0.021   NTclustered gi|2507414506|ref|XM_048923655.2| 37623 g181385 i0 100 0.717948717948718 28 0 12 0 198 225 845 872 PREDICTED: Ostrea edulis kinesin-like protein KIF13B (LOC125683000), transcript variant X1, mRNA blastn 168 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Ostrea Ostrea edulis
12018831 12018831 PRJNA558770_P_NODE_236930_length_234_cov_2.618090_g234925_i0 PRJNA558770 236930 234 2.61809 6.1263306 Mya arenaria 6604 Mollusca Mollusca 52.8 0.021   NTclustered gi|2427358220|ref|XM_052907738.1| 6604 g234925 i0 94.286 0.14957264957265 35 1 15 1 171 204 8062 8028 PREDICTED: Mya arenaria potassium channel subfamily T member 2-like (LOC128205783), mRNA blastn 35 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Myidae Mya Mya arenaria
13882599 13882599 PRJNA558770_P_NODE_13671_length_514_cov_12.035491_g11958_i0 PRJNA558770 13671 514 12.035491 61.86242374 Metazoa 33208 Mollusca Mollusca 270 1.28e-67   NTclustered gi|1928112764|gb|MT947788.1| 6523 g11958 i0 99.329 65.5 149 1 74 0 25 173 101 249 Lymnaea stagnalis isolate Lsta_434075 hypothetical protein mRNA, complete cds blastn 33667 270 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lymnaeidae Lymnaea Lymnaea stagnalis
15841516 15841516 PRJNA558770_P_NODE_176273_length_234_cov_4.824121_g174268_i0 PRJNA558770 176273 234 4.824121 11.28844314 Mercenaria mercenaria 6596 Mollusca Mollusca 100 7.38e-17   NTclustered gi|2442074455|ref|XM_045344960.2| 6596 g174268 i0 90.667 10.0854700854701 75 7 32 0 160 234 812 886 PREDICTED: Mercenaria mercenaria tubulin beta chain-like (LOC123554681), mRNA blastn 2360 100 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Mercenaria Mercenaria mercenaria
15845241 15845241 PRJNA558770_P_NODE_62393_length_264_cov_7.248908_g60388_i0 PRJNA558770 62393 264 7.248908 19.13711712 Bradybaena similaris 145626 Mollusca Mollusca 62.1 4.01e-5   NTclustered gi|2912999747|dbj|AP039606.1| 145626 g60388 i0 91.111 5.31060606060606 45 4 17 0 207 251 38093994 38093950 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 25, sequence blastn 1402 62.1 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
18392099 18392099 PRJNA558770_P_NODE_261015_length_234_cov_2.075377_g259010_i0 PRJNA558770 261015 234 2.075377 4.85638218 Magallana angulata 2784310 Mollusca Mollusca 104 5.7e-18   NTclustered gi|2416945054|ref|XM_052861107.1| 2784310 g259010 i0 91.892 0.948717948717949 74 6 32 0 1 74 3078 3151 PREDICTED: Crassostrea angulata uncharacterized LOC128189480 (LOC128189480), transcript variant X1, mRNA blastn 222 104 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Magallana Magallana angulata
18392178 18392178 PRJNA558770_P_NODE_265795_length_234_cov_1.984925_g263790_i0 PRJNA558770 265795 234 1.984925 4.6447245 Bradybaena similaris 145626 Mollusca Mollusca 58.4 4.5e-4   NTclustered gi|2912991694|dbj|AP039596.1| 145626 g263790 i0 86.538 0.222222222222222 52 7 22 0 13 64 32809897 32809846 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 15, sequence blastn 52 58.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
18394993 18394993 PRJNA558770_P_NODE_87995_length_234_cov_16.778894_g85990_i0 PRJNA558770 87995 234 16.778894 39.26261196 Crassostrea virginica 6565 Mollusca Mollusca 128 3.38e-25   NTclustered gi|1242794429|ref|XM_022481848.1| 6565 g85990 i0 98.611 1.26495726495726 72 1 63 0 160 231 605 676 PREDICTED: Crassostrea virginica ABC transporter B family member 25-like (LOC111133425), transcript variant X1, mRNA blastn 296 128 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Crassostrea Crassostrea virginica
19663950 19663950 PRJNA558770_P_NODE_127056_length_234_cov_8.417085_g125051_i0 PRJNA558770 127056 234 8.417085 19.6959789 Crassostrea virginica 6565 Mollusca Mollusca 104 5.7e-18   NTclustered gi|1242848173|ref|XM_022449753.1| 6565 g125051 i0 96.774 0.918803418803419 62 2 26 0 1 62 62 1 PREDICTED: Crassostrea virginica carboxylesterase 1C-like (LOC111112312), transcript variant X4, mRNA blastn 215 104 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Crassostrea Crassostrea virginica
22217522 22217522 PRJNA558770_P_NODE_274758_length_234_cov_1.819095_g272753_i0 PRJNA558770 274758 234 1.819095 4.2566823 Xylophaga washingtona 1049057 Mollusca Mollusca 86.1 2.07e-12   NTclustered gi|338163506|gb|JF899199.1| 1049057 g272753 i0 87.013 21.6452991452991 77 8 32 2 160 234 1092 1168 Xylophaga washingtona 28S ribosomal RNA gene, partial sequence blastn 5065 86.1 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Xylophagaidae Xylophaga Xylophaga washingtona
22805726 22805726 PRJNA558770_P_NODE_11198_length_556_cov_10.124760_g9576_i0 PRJNA558770 11198 556 10.12476 56.2936656 Metazoa 33208 Mollusca Mollusca 270 1.3899999999999999e-67   NTclustered gi|1928112764|gb|MT947788.1| 6523 g9576 i0 99.329 66.3974820143885 149 1 67 0 25 173 101 249 Lymnaea stagnalis isolate Lsta_434075 hypothetical protein mRNA, complete cds blastn 36917 270 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lymnaeidae Lymnaea Lymnaea stagnalis
22807378 22807378 PRJNA558770_P_NODE_76278_length_237_cov_36.391089_g74273_i0 PRJNA558770 76278 237 36.391089 86.24688093 Metazoa 33208 Mollusca Mollusca 195 3.3399999999999997e-45   NTclustered gi|1928112764|gb|MT947788.1| 6523 g74273 i0 100 81.0126582278481 105 0 81 0 132 236 1086 1190 Lymnaea stagnalis isolate Lsta_434075 hypothetical protein mRNA, complete cds blastn 19200 195 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lymnaeidae Lymnaea Lymnaea stagnalis
28924397 28924397 PRJNA558770_P_NODE_110948_length_234_cov_10.442211_g108943_i0 PRJNA558770 110948 234 10.442211 24.43477374 Opisthokonta 33154 Mollusca Mollusca 43.9 0.013   NR XP_052097856.1 6549 g108943 i0 83.3 1.53846153846154 24 4 30.8 0 74 3 188 211 XP_052097856.1 C-1-tetrahydrofolate synthase, cytoplasmic-like isoform X1 [Mytilus californianus] diamond 360 43.9 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus californianus
31041083 31041083 PRJNA558770_P_NODE_250715_length_234_cov_2.296482_g248710_i0 PRJNA558770 250715 234 2.296482 5.37376788 Metazoa 33208 Mollusca Mollusca 45.8 0.00273   NR XP_063431364.1 6551 g248710 i0 75 2.14102564102564 24 6 30.8 0 234 163 13 36 XP_063431364.1 transmembrane cell adhesion receptor mua-3-like [Mytilus trossulus] diamond 501 46.2 0.991341991341991 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus trossulus
32038837 32038837 PRJNA558770_P_NODE_380358_length_216_cov_6.961326_g378353_i0 PRJNA558770 380358 216 6.961326 15.03646416 Acanthosepion pharaonis 158019 Mollusca Mollusca 43.1 0.0195   NR CAE1244783.1 158019 g378353 i0 51.4 1 72 28 94.4 4 12 215 497 565 CAE1244783.1 unnamed protein product [Acanthosepion pharaonis] diamond 216 43.1 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Sepiida Sepiidae Acanthosepion Acanthosepion pharaonis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;