RNAquarium Metadata Server
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contig_metadata

14 rows where bioproject = "PRJNA558770" and tax_phylum = "Cossaviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cossaviricota · 14 ✖

tax_kingdom 1

bioproject 1

  • PRJNA558770 · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1817571 1817571 PRJNA558770_P_NODE_41702_length_329_cov_8.064626_g39704_i0 PRJNA558770 41702 329 8.064626 26.53261954 Psittacidae aveparvovirus 2794556 Viruses Viruses 440 5.659999999999997e-119   NTclustered gi|2015372674|gb|MW046380.1| 2794556 g39704 i0 91.562 0.972644376899696 320 25 97 2 1 319 347 29 MAG: Psittacidae aveparvovirus isolate fmg67par043 genomic sequence, sequence blastn 320 440 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Aveparvovirus Psittacidae aveparvovirus
1817693 1817693 PRJNA558770_P_NODE_45822_length_317_cov_68.482270_g43823_i0 PRJNA558770 45822 317 68.48227 217.0887959 Luscinia sibilans parvo-like hybrid virus 2794515 Viruses Viruses 84.2 1.05e-11   NTclustered gi|2015373198|gb|MW046538.1| 2794515 g43823 i0 90.476 0.198738170347003 63 6 20 0 55 117 523 585 MAG: Luscinia sibilans parvo-like hybrid virus isolate rtr167par08 genomic sequence, sequence blastn 63 84.2 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Luscinia sibilans parvo-like hybrid virus
3093139 3093139 PRJNA558770_P_NODE_52763_length_293_cov_4.879845_g50760_i0 PRJNA558770 52763 293 4.879845 14.29794585 Fish-associated parvo-like hybrid virus 3003968 Viruses Viruses 233 9.04e-57   NTclustered gi|2413975758|gb|OP933682.1| 3003968 g50760 i0 98.485 0.706484641638225 132 2 71 0 161 292 225 94 MAG: Fish-associated parvo-like hybrid virus isolate fi099par4 replication protein and capsid protein genes, complete cds blastn 207 233 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Fish-associated parvo-like hybrid virus
11332809 11332809 PRJNA558770_P_NODE_320009_length_233_cov_8.904040_g318004_i0 PRJNA558770 320009 233 8.90404 20.7464132 Parvoviridae 10780 Viruses Viruses 139 1.56e-28   NTclustered gi|1839275014|gb|MN794869.1| 2575728 g318004 i0 100 18.3905579399142 75 0 64 0 1 75 1971 1897 Carnivore chapparvovirus 1 isolate VRI 849, complete genome blastn 4285 139 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Chapparvovirus Carnivore chapparvovirus 1
12607601 12607601 PRJNA558770_P_NODE_119930_length_234_cov_9.221106_g117925_i0 PRJNA558770 119930 234 9.221106 21.57738804 Betapapillomavirus 333922 Viruses Viruses 141 4.35e-29   NTclustered gi|1559669520|gb|MH777361.2| 10566 g117925 i0 100 1.27350427350427 76 0 64 0 1 76 4362 4437 MAG: Human papillomavirus isolate HPV-mSK_222, complete genome blastn 298 141 1 Viruses Human papillomavirus types Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Human papillomavirus
15157719 15157719 PRJNA558770_P_NODE_337392_length_233_cov_4.383838_g335387_i0 PRJNA558770 337392 233 4.383838 10.21434254 Betapapillomavirus 333922 Viruses Viruses 135 2.0100000000000003e-27   NTclustered gi|1559669520|gb|MH777361.2| 10566 g335387 i0 98.684 1.31330472103004 76 1 65 0 1 76 3728 3803 MAG: Human papillomavirus isolate HPV-mSK_222, complete genome blastn 306 135 1 Viruses Human papillomavirus types Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Human papillomavirus
15844646 15844646 PRJNA558770_P_NODE_395313_length_159_cov_4.362903_g393308_i0 PRJNA558770 395313 159 4.362903 6.93701577 Fish-associated parvo-like hybrid virus 3003968 Viruses Viruses 274 2.58e-69   NTclustered gi|2413975758|gb|OP933682.1| 3003968 g393308 i0 98.089 1.33333333333333 157 3 99 0 3 159 830 674 MAG: Fish-associated parvo-like hybrid virus isolate fi099par4 replication protein and capsid protein genes, complete cds blastn 212 274 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Fish-associated parvo-like hybrid virus
18393142 18393142 PRJNA558770_P_NODE_347615_length_233_cov_1.803030_g345610_i0 PRJNA558770 347615 233 1.80303 4.2010599 Parvoviridae sp. 1940570 Viruses Viruses 134 7.240000000000001e-27   NTclustered gi|2413975755|gb|OP933681.1| 1940570 g345610 i0 98.667 0.763948497854077 75 1 64 0 159 233 1148 1074 MAG: Parvoviridae sp. isolate fi099par3 replication protein and capsid protein genes, complete cds blastn 178 134 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvoviridae sp.
20255609 20255609 PRJNA558770_P_NODE_20776_length_438_cov_8.411911_g18886_i0 PRJNA558770 20776 438 8.411911 36.84417018 Betapapillomavirus 333922 Viruses Viruses 213 1.83e-50   NTclustered gi|1559669520|gb|MH777361.2| 10566 g18886 i0 98.347 5.57077625570776 121 2 62 0 160 280 5365 5485 MAG: Human papillomavirus isolate HPV-mSK_222, complete genome blastn 2440 213 1 Viruses Human papillomavirus types Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Human papillomavirus
22219820 22219820 PRJNA558770_P_NODE_73018_length_243_cov_3.653846_g71013_i0 PRJNA558770 73018 243 3.653846 8.87884578 Psittaciform aveparvovirus 3042447 Viruses Viruses 416 6.739999999999998e-112   NTclustered gi|2496529060|gb|OP577480.1| 3042447 g71013 i0 97.541 1.00411522633745 244 4 100 2 1 243 1770 2012 Psittaciform aveparvovirus strain OBP1/FE1/49/2021, partial genome blastn 244 416 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Aveparvovirus Psittaciform aveparvovirus
24082205 24082205 PRJNA558770_P_NODE_8739_length_607_cov_10.375874_g7257_i0 PRJNA558770 8739 607 10.375874 62.98155518 Betapapillomavirus 333922 Viruses Viruses 213 2.61e-50   NTclustered gi|1559669520|gb|MH777361.2| 10566 g7257 i0 98.347 6.84349258649094 121 2 71 0 159 279 5485 5365 MAG: Human papillomavirus isolate HPV-mSK_222, complete genome blastn 4154 213 1 Viruses Human papillomavirus types Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Human papillomavirus
24765272 24765272 PRJNA558770_P_NODE_192780_length_234_cov_4.070352_g190775_i0 PRJNA558770 192780 234 4.070352 9.52462368 Psittacidae aveparvovirus 2794556 Viruses Viruses 134 7.28e-27   NTclustered gi|2814138529|gb|PQ313127.1| 2794556 g190775 i0 98.649 0.786324786324786 74 1 64 0 1 74 443 370 Parvo-like hybrid virus isolate SpinColumn12, partial genome blastn 184 134 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Psittacidae aveparvovirus
29478628 29478628 PRJNA558770_P_NODE_391010_length_173_cov_3.318841_g389005_i0 PRJNA558770 391010 173 3.318841 5.74159493 Luscinia sibilans parvo-like hybrid virus 2794515 Viruses Viruses 113 1.33e-27   NR QTE03983.1 2794515 g389005 i0 91.2 0.988439306358382 57 5 98.8 0 3 173 388 444 QTE03983.1 MAG: capsid protein, partial [Luscinia sibilans parvo-like hybrid virus] diamond 171 113 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Luscinia sibilans parvo-like hybrid virus
31690752 31690752 PRJNA558770_P_NODE_379677_length_219_cov_6.048913_g377672_i0 PRJNA558770 379677 219 6.048913 13.24711947 Parvoviridae sp. 1940570 Viruses Viruses 44.7 0.00555   NR XNT21158.1 1940570 g377672 i0 51.1 0.616438356164384 45 22 61.6 0 45 179 358 402 XNT21158.1 MAG: replication protein [Parvoviridae sp.] diamond 135 44.7 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;