RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA558770" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA558770 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6233411 6233411 PRJNA558770_P_NODE_381485_length_211_cov_7.306818_g379480_i0 PRJNA558770 381485 211 7.306818 15.41738598 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 141 3.85e-29   NTclustered gi|2113718509|ref|XR_006393933.1| 45264 g379480 i0 86.029 64.1848341232227 136 13 64 6 4 137 2584 2715 PREDICTED: Acropora millepora large subunit ribosomal RNA (LOC122955186), rRNA blastn 13543 141 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora millepora
9467604 9467604 PRJNA558770_P_NODE_190288_length_234_cov_4.170854_g188283_i0 PRJNA558770 190288 234 4.170854 9.75979836 Eunicella cavolini 317547 Cnidaria other_Eukaryota 56.5 0.002   NTclustered gi|2918369536|emb|OZ237718.1| 317547 g188283 i0 94.444 0.290598290598291 36 2 15 0 197 232 53745391 53745426 Eunicella cavolini genome assembly, chromosome: 2 blastn 68 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini
17707089 17707089 PRJNA558770_P_NODE_217014_length_234_cov_3.180905_g215009_i0 PRJNA558770 217014 234 3.180905 7.4433177 Metazoa 33208 Cnidaria other_Eukaryota 56.5 0.002   NTclustered gi|2917940724|emb|OZ237563.1| 6108 g215009 i0 100 1.14957264957265 30 0 13 0 142 171 455682 455653 Anemonia sulcata genome assembly, chromosome: 9 blastn 269 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
20944551 20944551 PRJNA558770_P_NODE_60417_length_269_cov_1.482906_g58412_i0 PRJNA558770 60417 269 1.482906 3.98901714 Anemonia sulcata 6108 Cnidaria other_Eukaryota 54.7 0.007   NTclustered gi|2917940693|emb|OZ237556.1| 6108 g58412 i0 94.444 0.594795539033457 36 1 13 1 168 202 1482266 1482231 Anemonia sulcata genome assembly, chromosome: 2 blastn 160 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
23492811 23492811 PRJNA558770_P_NODE_273979_length_234_cov_1.834171_g271974_i0 PRJNA558770 273979 234 1.834171 4.29196014 Hydra vulgaris 6087 Cnidaria other_Eukaryota 58.4 4.5e-4   NTclustered gi|2744807007|ref|XR_007021335.2| 6087 g271974 i0 92.683 0.175213675213675 41 1 18 2 35 75 261 299 PREDICTED: Hydra vulgaris uncharacterized LOC124810868 (LOC124810868), ncRNA blastn 41 58.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
24766586 24766586 PRJNA558770_P_NODE_271920_length_234_cov_1.874372_g269915_i0 PRJNA558770 271920 234 1.874372 4.38603048 Rhopilema esculentum 499914 Cnidaria other_Eukaryota 52.8 0.021   NTclustered gi|2729102036|ref|XM_065214049.1| 499914 g269915 i0 100 0.11965811965812 28 0 12 0 190 217 1785 1812 PREDICTED: Rhopilema esculentum rhodopsin, GQ-coupled-like (LOC135695092), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Rhizostomatidae Rhopilema Rhopilema esculentum
31975468 31975468 PRJNA558770_P_NODE_181218_length_234_cov_4.587940_g179213_i0 PRJNA558770 181218 234 4.58794 10.7357796 Hydractinia symbiolongicarpus 13093 Cnidaria other_Eukaryota 50.8 3.86e-5   NR XP_057293116.1 13093 g179213 i0 78.3 0.58974358974359 23 5 29.5 0 166 234 199 221 XP_057293116.1 uncharacterized protein LOC130621786 [Hydractinia symbiolongicarpus] diamond 138 50.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;