RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA558770" and tax_phylum = "Candidatus Kapaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA558770 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28184088 28184088 PRJNA558770_P_NODE_230846_length_234_cov_2.778894_g228841_i0 PRJNA558770 230846 234 2.778894 6.50261196 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 44.7 0.00119   NR HET6510872.1 2447898 g228841 i0 83.3 0.307692307692308 24 4 30.8 0 73 2 65 88 HET6510872.1 glycine cleavage system H protein [Candidatus Kapaibacterium sp.] diamond 72 44.7 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
28735156 28735156 PRJNA558770_P_NODE_205607_length_234_cov_3.572864_g203602_i0 PRJNA558770 205607 234 3.572864 8.36050176 Pseudomonadati 3379134 Bacteria Bacteria 51.2 3.06e-5   NR HET6400029.1 2447898 g203602 i0 87.5 0.615384615384615 24 3 30.8 0 4 75 67 90 HET6400029.1 zinc ABC transporter substrate-binding protein [Candidatus Kapaibacterium sp.] diamond 144 51.2 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
29794484 29794484 PRJNA558770_P_NODE_395411_length_159_cov_1.637097_g393406_i0 PRJNA558770 395411 159 1.637097 2.60298423 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 57.8 3.83e-8   NR TAE20511.1 2447898 g393406 i0 78.6 1.45283018867925 28 6 52.8 0 1 84 201 228 TAE20511.1 MAG: hypothetical protein EAZ92_17950 [Candidatus Kapaibacterium sp.] diamond 231 57.8 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;