RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA558770" and tax_phylum = "Candidatus Curtissiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Curtissiibacteriota · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA558770 · 5 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26934723 26934723 PRJNA558770_P_NODE_167582_length_234_cov_5.301508_g165577_i0 PRJNA558770 167582 234 5.301508 12.40552872 Bacteria 2 Bacteria Bacteria 48.5 3.11e-4   NR KKR58142.1 1618412 g165577 i0 54.5 0.846153846153846 33 15 42.3 0 102 4 602 634 KKR58142.1 MAG: hypothetical protein UT95_C0010G0028 [Candidatus Curtissbacteria bacterium GW2011_GWB1_40_28] diamond 198 48.5 1 Bacteria Bacteria candidate phyla   Candidatus Curtissiibacteriota         Candidatus Curtissbacteria bacterium GW2011_GWB1_40_28
27566782 27566782 PRJNA558770_P_NODE_314644_length_233_cov_10.570707_g312639_i0 PRJNA558770 314644 233 10.570707 24.62974731 Bacteria 2 Bacteria Bacteria 55.1 1.37e-7   NR OGD87118.1 1797711 g312639 i0 96 1.28755364806867 25 1 32.2 0 75 1 6 30 OGD87118.1 MAG: hypothetical protein A2870_02305 [Candidatus Curtissbacteria bacterium RIFCSPHIGHO2_01_FULL_41_11] diamond 300 55.1 1 Bacteria Bacteria candidate phyla   Candidatus Curtissiibacteriota         Candidatus Curtissbacteria bacterium RIFCSPHIGHO2_01_FULL_41_11
29984181 29984181 PRJNA558770_P_NODE_265751_length_234_cov_1.984925_g263746_i0 PRJNA558770 265751 234 1.984925 4.6447245 Candidatus Curtissbacteria bacterium 2750075 Bacteria Bacteria 48.9 2.19e-4   NR MDO8486937.1 2750075 g263746 i0 87.5 0.923076923076923 24 3 30.8 0 162 233 95 118 MDO8486937.1 ATP-dependent DNA helicase RecG [Candidatus Curtissbacteria bacterium] diamond 216 48.9 1 Bacteria Bacteria candidate phyla   Candidatus Curtissiibacteriota         Candidatus Curtissbacteria bacterium
31722340 31722340 PRJNA558770_P_NODE_223917_length_234_cov_2.979899_g221912_i0 PRJNA558770 223917 234 2.979899 6.97296366 Candidatus Curtissbacteria bacterium 2750075 Bacteria Bacteria 43.1 0.00774   NR MBI2327347.1 2750075 g221912 i0 76 0.935897435897436 25 6 32.1 0 2 76 20 44 MBI2327347.1 clan AA aspartic protease [Candidatus Curtissbacteria bacterium] diamond 219 43.1 1 Bacteria Bacteria candidate phyla   Candidatus Curtissiibacteriota         Candidatus Curtissbacteria bacterium
31799575 31799575 PRJNA558770_P_NODE_272077_length_234_cov_1.869347_g270072_i0 PRJNA558770 272077 234 1.869347 4.37427198 root 1 Root_unresolved Root_unresolved 53.5 5.03e-6   NR KKR47679.1 1618405 g270072 i0 87 2.35897435897436 23 3 29.5 0 6 74 7 29 KKR47679.1 MAG: repair protein radA protein [Candidatus Curtissbacteria bacterium GW2011_GWA1_40_16] diamond 552 53.5 1 Bacteria Bacteria candidate phyla   Candidatus Curtissiibacteriota         Candidatus Curtissbacteria bacterium GW2011_GWA1_40_16

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;