contig_metadata
50 rows where bioproject = "PRJNA558770", tax_kingdom = "Pseudomonadati" and tax_phylum = "Nitrospirota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1815184 | 1815184 | PRJNA558770_P_NODE_219402_length_234_cov_3.110553_g217397_i0 | PRJNA558770 | 219402 | 234 | 3.110553 | 7.27869402 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 84.2 | 7.43e-12 | NTclustered | gi|2194432121|gb|CP092081.1| | 70125 | g217397 | i0 | 92.982 | 19.1538461538462 | 57 | 4 | 24 | 0 | 160 | 216 | 3728487 | 3728543 | MAG: Nitrospira sp. isolate UBC2 chromosome | blastn | 4482 | 84.2 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 3089696 | 3089696 | PRJNA558770_P_NODE_180503_length_234_cov_4.623116_g178498_i0 | PRJNA558770 | 180503 | 234 | 4.623116 | 10.81809144 | Nitrospira sp. KM1 | 1936990 | Bacteria | Bacteria | 69.4 | 2.08e-7 | NTclustered | gi|1808878785|dbj|AP022671.1| | 1936990 | g178498 | i0 | 89.286 | 0.239316239316239 | 56 | 5 | 24 | 1 | 166 | 220 | 1603609 | 1603664 | Nitrospira sp. KM1 DNA, complete genome | blastn | 56 | 69.4 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. KM1 | ||
| 10743526 | 10743526 | PRJNA558770_P_NODE_209389_length_234_cov_3.437186_g207384_i0 | PRJNA558770 | 209389 | 234 | 3.437186 | 8.04301524 | Candidatus Nitrospira neomarina | 3020899 | Bacteria | Bacteria | 63.9 | 9.68e-6 | NTclustered | gi|2582130041|gb|CP116968.1| | 3020899 | g207384 | i0 | 90.196 | 0.405982905982906 | 51 | 2 | 21 | 3 | 164 | 213 | 4222962 | 4223010 | Candidatus Nitrospira neomarina strain DK chromosome, complete genome | blastn | 95 | 63.9 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Candidatus Nitrospira neomarina | ||
| 10743676 | 10743676 | PRJNA558770_P_NODE_216929_length_234_cov_3.185930_g214924_i0 | PRJNA558770 | 216929 | 234 | 3.18593 | 7.4550762 | Dissulfurispira thermophila | 2715679 | Bacteria | Bacteria | 67.6 | 7.48e-7 | NTclustered | gi|1901208073|dbj|AP022873.1| | 2715679 | g214924 | i0 | 87.719 | 0.683760683760684 | 57 | 7 | 24 | 0 | 4 | 60 | 732197 | 732141 | Dissulfurispira thermophila T55J DNA, complete genome | blastn | 160 | 67.6 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Thermodesulfovibrionia | Thermodesulfovibrionales | Dissulfurispiraceae | Dissulfurispira | Dissulfurispira thermophila | ||
| 12019534 | 12019534 | PRJNA558770_P_NODE_280730_length_234_cov_1.723618_g278725_i0 | PRJNA558770 | 280730 | 234 | 1.723618 | 4.03326612 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 128 | 3.38e-25 | NTclustered | gi|2290915413|gb|CP060502.1| | 70125 | g278725 | i0 | 97.333 | 1.28205128205128 | 75 | 2 | 64 | 0 | 1 | 75 | 201046 | 201120 | MAG: Nitrospira sp. isolate NSFW plasmid pNSFW1, complete sequence | blastn | 300 | 128 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 13293934 | 13293934 | PRJNA558770_P_NODE_243791_length_234_cov_2.447236_g241786_i0 | PRJNA558770 | 243791 | 234 | 2.447236 | 5.72653224 | Candidatus Nitrospira inopinata | 1715989 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|952974062|emb|LN885086.1| | 1715989 | g241786 | i0 | 96.875 | 0.136752136752137 | 32 | 1 | 14 | 0 | 187 | 218 | 1439484 | 1439453 | Nitrospira sp. ENR4 genome assembly NiCh1, chromosome : 1 | blastn | 32 | 54.7 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Candidatus Nitrospira inopinata | ||
| 19666875 | 19666875 | PRJNA558770_P_NODE_275656_length_234_cov_1.804020_g273651_i0 | PRJNA558770 | 275656 | 234 | 1.80402 | 4.2214068 | Candidatus Nitrospira kreftii | 2652173 | Bacteria | Bacteria | 73.1 | 1.61e-8 | NTclustered | gi|1884724763|gb|CP047423.1| | 2652173 | g273651 | i0 | 93.75 | 0.205128205128205 | 48 | 3 | 21 | 0 | 160 | 207 | 3845399 | 3845446 | Candidatus Nitrospira kreftii isolate comreactor17 chromosome, complete genome | blastn | 48 | 73.1 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Candidatus Nitrospira kreftii | ||
| 26712891 | 26712891 | PRJNA558770_P_NODE_366201_length_232_cov_2.269036_g364196_i0 | PRJNA558770 | 366201 | 232 | 2.269036 | 5.26416352 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 45.1 | 0.00472 | NR | MCC2641341.1 | 70125 | g364196 | i0 | 34.3 | 3.71120689655172 | 70 | 23 | 90.5 | 1 | 212 | 3 | 235 | 281 | MCC2641341.1 hypothetical protein [Nitrospira sp.] | diamond | 861 | 45.4 | 0.993392070484582 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 26983941 | 26983941 | PRJNA558770_P_NODE_225322_length_234_cov_2.939698_g223317_i0 | PRJNA558770 | 225322 | 234 | 2.939698 | 6.87889332 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 53.9 | 3.85e-6 | NR | MDR4470746.1 | 70125 | g223317 | i0 | 80 | 0.961538461538462 | 25 | 5 | 32.1 | 0 | 1 | 75 | 208 | 232 | MDR4470746.1 AIPR family protein [Nitrospira sp.] | diamond | 225 | 53.9 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 27205071 | 27205071 | PRJNA558770_P_NODE_139582_length_234_cov_7.226131_g137577_i0 | PRJNA558770 | 139582 | 234 | 7.226131 | 16.90914654 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 78.2 | 5.81e-16 | NR | HEY7128955.1 | 70125 | g137577 | i0 | 56.6 | 2.93589743589744 | 76 | 32 | 97.4 | 1 | 232 | 5 | 60 | 134 | HEY7128955.1 UpxY family transcription antiterminator [Nitrospira sp.] | diamond | 687 | 78.2 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 27584410 | 27584410 | PRJNA558770_P_NODE_326904_length_233_cov_7.025253_g324899_i0 | PRJNA558770 | 326904 | 233 | 7.025253 | 16.36883949 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 47.4 | 7.53e-4 | NR | MDD5433987.1 | 70125 | g324899 | i0 | 63.3 | 0.386266094420601 | 30 | 11 | 38.6 | 0 | 4 | 93 | 198 | 227 | MDD5433987.1 terminase family protein [Nitrospira sp.] | diamond | 90 | 47.4 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 27661781 | 27661781 | PRJNA558770_P_NODE_138924_length_234_cov_7.281407_g136919_i0 | PRJNA558770 | 138924 | 234 | 7.281407 | 17.03849238 | Nitrospira | 1234 | Bacteria | Bacteria | 59.7 | 1.26e-8 | NR | HRI37561.1 | 70125 | g136919 | i0 | 100 | 1.28205128205128 | 25 | 0 | 32.1 | 0 | 233 | 159 | 118 | 142 | HRI37561.1 NapC/NirT family cytochrome c [Nitrospira sp.] | diamond | 300 | 59.7 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 27774058 | 27774058 | PRJNA558770_P_NODE_345484_length_233_cov_2.378788_g343479_i0 | PRJNA558770 | 345484 | 233 | 2.378788 | 5.54257604 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 45.8 | 7.86e-4 | NR | MEK6745226.1 | 2026887 | g343479 | i0 | 68 | 0.630901287553648 | 25 | 8 | 32.2 | 0 | 158 | 232 | 83 | 107 | MEK6745226.1 endonuclease domain-containing protein [Nitrospirota bacterium] | diamond | 147 | 45.8 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 27868448 | 27868448 | PRJNA558770_P_NODE_207765_length_234_cov_3.492462_g205760_i0 | PRJNA558770 | 207765 | 234 | 3.492462 | 8.17236108 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 43.5 | 0.0183 | NR | MBI5747053.1 | 2026887 | g205760 | i0 | 91.7 | 0.307692307692308 | 24 | 2 | 30.8 | 0 | 75 | 4 | 426 | 449 | MBI5747053.1 thioredoxin domain-containing protein [Nitrospirota bacterium] | diamond | 72 | 43.5 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 27899950 | 27899950 | PRJNA558770_P_NODE_111065_length_234_cov_10.427136_g109060_i0 | PRJNA558770 | 111065 | 234 | 10.427136 | 24.39949824 | Nitrospiraceae bacterium | 2026770 | Bacteria | Bacteria | 42.4 | 0.0315 | NR | MER3422197.1 | 2026770 | g109060 | i0 | 68 | 0.320512820512821 | 25 | 8 | 32.1 | 0 | 1 | 75 | 54 | 78 | MER3422197.1 hypothetical protein [Nitrospiraceae bacterium] | diamond | 75 | 42.4 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospiraceae bacterium | |||
| 28026540 | 28026540 | PRJNA558770_P_NODE_147645_length_234_cov_6.587940_g145640_i0 | PRJNA558770 | 147645 | 234 | 6.58794 | 15.4157796 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 55.1 | 2.84e-7 | NR | MEK7267320.1 | 2026887 | g145640 | i0 | 100 | 1.23076923076923 | 24 | 0 | 30.8 | 0 | 161 | 232 | 29 | 52 | MEK7267320.1 tetratricopeptide repeat protein [Nitrospirota bacterium] | diamond | 288 | 55.1 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 28026589 | 28026589 | PRJNA558770_P_NODE_291325_length_234_cov_1.537688_g289320_i0 | PRJNA558770 | 291325 | 234 | 1.537688 | 3.59818992 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 56.6 | 4.15e-7 | NR | MDF2755773.1 | 70125 | g289320 | i0 | 48.7 | 1 | 78 | 30 | 87.2 | 1 | 31 | 234 | 1 | 78 | MDF2755773.1 hypothetical protein [Nitrospira sp.] | diamond | 234 | 56.6 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 28626532 | 28626532 | PRJNA558770_P_NODE_153187_length_234_cov_6.201005_g151182_i0 | PRJNA558770 | 153187 | 234 | 6.201005 | 14.5103517 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 56.2 | 5.37e-7 | NR | HMS85978.1 | 70125 | g151182 | i0 | 41.6 | 1.14102564102564 | 89 | 40 | 98.7 | 1 | 3 | 233 | 190 | 278 | HMS85978.1 NAD(P)-dependent alcohol dehydrogenase [Nitrospira sp.] | diamond | 267 | 56.2 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 28658067 | 28658067 | PRJNA558770_P_NODE_240667_length_234_cov_2.522613_g238662_i0 | PRJNA558770 | 240667 | 234 | 2.522613 | 5.90291442 | Nitrospira sp. BLG_1 | 3395883 | Bacteria | Bacteria | 48.5 | 3.03e-4 | NR | WP_413937057.1 | 3395883 | g238662 | i0 | 40.3 | 0.858974358974359 | 67 | 30 | 85.9 | 1 | 231 | 31 | 244 | 300 | WP_413937057.1 hypothetical protein [Nitrospira sp. BLG_1] | diamond | 201 | 48.5 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. BLG_1 | ||
| 28784079 | 28784079 | PRJNA558770_P_NODE_287047_length_234_cov_1.623116_g285042_i0 | PRJNA558770 | 287047 | 234 | 1.623116 | 3.79809144 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 49.7 | 2.43e-5 | NR | HEX5550720.1 | 70125 | g285042 | i0 | 92 | 0.641025641025641 | 25 | 2 | 32.1 | 0 | 234 | 160 | 12 | 36 | HEX5550720.1 DUF5666 domain-containing protein [Nitrospira sp.] | diamond | 150 | 49.7 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 28942332 | 28942332 | PRJNA558770_P_NODE_189368_length_234_cov_4.211055_g187363_i0 | PRJNA558770 | 189368 | 234 | 4.211055 | 9.8538687 | Nitrospirae bacterium RBG_13_41_22 | 1801704 | Bacteria | Bacteria | 59.7 | 3.48e-8 | NR | OGW43582.1 | 1801704 | g187363 | i0 | 53.2 | 0.794871794871795 | 62 | 10 | 79.5 | 1 | 187 | 2 | 1 | 43 | OGW43582.1 MAG: hypothetical protein A2Y66_02255 [Nitrospirae bacterium RBG_13_41_22] | diamond | 186 | 59.7 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirae bacterium RBG_13_41_22 | ||||||
| 29019604 | 29019604 | PRJNA558770_P_NODE_243448_length_234_cov_2.457286_g241443_i0 | PRJNA558770 | 243448 | 234 | 2.457286 | 5.75004924 | Nitrospira | 1234 | Bacteria | Bacteria | 46.6 | 0.0011 | NR | HET8721443.1 | 70125 | g241443 | i0 | 100 | 2.46153846153846 | 24 | 0 | 30.8 | 0 | 73 | 2 | 36 | 59 | HET8721443.1 type II secretion system protein [Nitrospira sp.] | diamond | 576 | 46.6 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 29051036 | 29051036 | PRJNA558770_P_NODE_152768_length_234_cov_6.226131_g150763_i0 | PRJNA558770 | 152768 | 234 | 6.226131 | 14.56914654 | Nitrospira | 1234 | Bacteria | Bacteria | 49.7 | 1.2e-5 | NR | MBL8072229.1 | 70125 | g150763 | i0 | 96 | 6.08974358974359 | 25 | 1 | 32.1 | 0 | 160 | 234 | 15 | 39 | MBL8072229.1 hypothetical protein [Nitrospira sp.] | diamond | 1425 | 49.7 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 29051044 | 29051044 | PRJNA558770_P_NODE_195708_length_234_cov_3.949749_g193703_i0 | PRJNA558770 | 195708 | 234 | 3.949749 | 9.24241266 | root | 1 | Root_unresolved | Root_unresolved | 50.1 | 8.8e-5 | NR | MEW6585562.1 | 2026887 | g193703 | i0 | 91.7 | 3.69230769230769 | 24 | 2 | 30.8 | 0 | 4 | 75 | 110 | 133 | MEW6585562.1 FMN-binding glutamate synthase family protein [Nitrospirota bacterium] | diamond | 864 | 50.1 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 29131698 | 29131698 | PRJNA558770_P_NODE_204949_length_234_cov_3.597990_g202944_i0 | PRJNA558770 | 204949 | 234 | 3.59799 | 8.4192966 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 48.5 | 2.34e-4 | NR | HEX6531620.1 | 70125 | g202944 | i0 | 87.5 | 0.307692307692308 | 24 | 3 | 30.8 | 0 | 74 | 3 | 18 | 41 | HEX6531620.1 ATP phosphoribosyltransferase [Nitrospira sp.] | diamond | 72 | 48.5 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 29289341 | 29289341 | PRJNA558770_P_NODE_249389_length_234_cov_2.321608_g247384_i0 | PRJNA558770 | 249389 | 234 | 2.321608 | 5.43256272 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 53.1 | 6.89e-6 | NR | HAN92282.1 | 70125 | g247384 | i0 | 100 | 0.307692307692308 | 24 | 0 | 30.8 | 0 | 161 | 232 | 265 | 288 | HAN92282.1 hypothetical protein [Nitrospira sp.] | diamond | 72 | 53.1 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 29352689 | 29352689 | PRJNA558770_P_NODE_257209_length_234_cov_2.155779_g255204_i0 | PRJNA558770 | 257209 | 234 | 2.155779 | 5.04452286 | Nitrospira cf. moscoviensis SBR1 | 96242 | Bacteria | Bacteria | 76.3 | 2.15e-14 | NR | WP_087475171.1 | 96242 | g255204 | i0 | 56.5 | 1.08974358974359 | 85 | 29 | 98.7 | 1 | 232 | 2 | 177 | 261 | WP_087475171.1 hypothetical protein [Nitrospira cf. moscoviensis SBR1015] | diamond | 255 | 76.3 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira cf. moscoviensis SBR1015 | ||
| 29461009 | 29461009 | PRJNA558770_P_NODE_104530_length_234_cov_11.512563_g102525_i0 | PRJNA558770 | 104530 | 234 | 11.512563 | 26.93939742 | Bacteria | 2 | Bacteria | Bacteria | 45.8 | 0.00244 | NR | MCA9474179.1 | 70125 | g102525 | i0 | 78.3 | 2.08974358974359 | 23 | 5 | 29.5 | 0 | 76 | 8 | 192 | 214 | MCA9474179.1 site-specific DNA-methyltransferase [Nitrospira sp.] | diamond | 489 | 46.2 | 0.991341991341991 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 29510315 | 29510315 | PRJNA558770_P_NODE_257190_length_234_cov_2.155779_g255185_i0 | PRJNA558770 | 257190 | 234 | 2.155779 | 5.04452286 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 43.1 | 0.0248 | NR | HNA26129.1 | 70125 | g255185 | i0 | 79.2 | 1.84615384615385 | 24 | 5 | 30.8 | 0 | 162 | 233 | 1498 | 1521 | HNA26129.1 cadherin-like domain-containing protein [Nitrospira sp.] | diamond | 432 | 43.1 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 29604815 | 29604815 | PRJNA558770_P_NODE_213830_length_234_cov_3.286432_g211825_i0 | PRJNA558770 | 213830 | 234 | 3.286432 | 7.69025088 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 48.1 | 4.07e-4 | NR | HEU4503971.1 | 70125 | g211825 | i0 | 87.5 | 0.923076923076923 | 24 | 3 | 30.8 | 0 | 73 | 2 | 139 | 162 | HEU4503971.1 ATP-binding protein [Nitrospira sp.] | diamond | 216 | 48.1 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 29604819 | 29604819 | PRJNA558770_P_NODE_218150_length_234_cov_3.145729_g216145_i0 | PRJNA558770 | 218150 | 234 | 3.145729 | 7.36100586 | Nitrospirae bacterium RBG_19FT_COMBO_58_9 | 1801711 | Bacteria | Bacteria | 51.2 | 3.32e-5 | NR | OGW52113.1 | 1801711 | g216145 | i0 | 96 | 0.641025641025641 | 25 | 1 | 32.1 | 0 | 75 | 1 | 114 | 138 | OGW52113.1 MAG: arsenical-resistance protein [Nitrospirae bacterium RBG_19FT_COMBO_58_9] | diamond | 150 | 51.2 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirae bacterium RBG_19FT_COMBO_58_9 | ||||||
| 29921116 | 29921116 | PRJNA558770_P_NODE_185551_length_234_cov_4.381910_g183546_i0 | PRJNA558770 | 185551 | 234 | 4.38191 | 10.2536694 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 43.9 | 0.00537 | NR | HKY71939.1 | 70125 | g183546 | i0 | 91.3 | 0.294871794871795 | 23 | 2 | 29.5 | 0 | 3 | 71 | 115 | 137 | HKY71939.1 response regulator transcription factor [Nitrospira sp.] | diamond | 69 | 43.9 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 29935162 | 29935162 | PRJNA558770_P_NODE_289011_length_234_cov_1.587940_g287006_i0 | PRJNA558770 | 289011 | 234 | 1.58794 | 3.7157796 | Nitrospira | 1234 | Bacteria | Bacteria | 52.4 | 1.27e-5 | NR | WP_053378527.1 | 42253 | g287006 | i0 | 100 | 3.38461538461538 | 24 | 0 | 30.8 | 0 | 232 | 161 | 82 | 105 | WP_053378527.1 adenosylhomocysteinase [Nitrospira moscoviensis] | diamond | 792 | 52.4 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira moscoviensis | ||
| 30173615 | 30173615 | PRJNA558770_P_NODE_219432_length_234_cov_3.110553_g217427_i0 | PRJNA558770 | 219432 | 234 | 3.110553 | 7.27869402 | Nitrospiraceae bacterium | 2026770 | Bacteria | Bacteria | 60.5 | 1.82e-8 | NR | HEY6973266.1 | 2026770 | g217427 | i0 | 100 | 3.20512820512821 | 25 | 0 | 32.1 | 0 | 2 | 76 | 401 | 425 | HEY6973266.1 radical SAM protein [Nitrospiraceae bacterium] | diamond | 750 | 60.5 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospiraceae bacterium | |||
| 31184458 | 31184458 | PRJNA558770_P_NODE_227315_length_234_cov_2.884422_g225310_i0 | PRJNA558770 | 227315 | 234 | 2.884422 | 6.74954748 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 55.8 | 7.53e-7 | NR | MFO0707286.1 | 70125 | g225310 | i0 | 100 | 0.320512820512821 | 25 | 0 | 32.1 | 0 | 233 | 159 | 59 | 83 | MFO0707286.1 phosphopentomutase [Nitrospira sp.] | diamond | 75 | 55.8 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 31247927 | 31247927 | PRJNA558770_P_NODE_129675_length_234_cov_8.140704_g127670_i0 | PRJNA558770 | 129675 | 234 | 8.140704 | 19.04924736 | Candidatus Nitrospira nitrificans | 1742973 | Bacteria | Bacteria | 77.8 | 4.57e-15 | NR | CUS32748.1 | 1742973 | g127670 | i0 | 61 | 0.987179487179487 | 77 | 30 | 98.7 | 0 | 4 | 234 | 175 | 251 | CUS32748.1 Putative Phage integrase (fragment) [Candidatus Nitrospira nitrificans] | diamond | 231 | 77.8 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Candidatus Nitrospira nitrificans | ||
| 31262079 | 31262079 | PRJNA558770_P_NODE_241195_length_234_cov_2.512563_g239190_i0 | PRJNA558770 | 241195 | 234 | 2.512563 | 5.87939742 | Nitrospira | 1234 | Bacteria | Bacteria | 55.1 | 1.43e-6 | NR | HEU5202413.1 | 70125 | g239190 | i0 | 100 | 22.7692307692308 | 24 | 0 | 30.8 | 0 | 2 | 73 | 173 | 196 | HEU5202413.1 hypothetical protein [Nitrospira sp.] | diamond | 5328 | 55.1 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 31325230 | 31325230 | PRJNA558770_P_NODE_248595_length_234_cov_2.341709_g246590_i0 | PRJNA558770 | 248595 | 234 | 2.341709 | 5.47959906 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 42.4 | 0.041 | NR | HMZ57071.1 | 70125 | g246590 | i0 | 86.4 | 2.76923076923077 | 22 | 3 | 28.2 | 0 | 75 | 10 | 99 | 120 | HMZ57071.1 transposase [Nitrospira sp.] | diamond | 648 | 42.7 | 0.992974238875878 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 31342916 | 31342916 | PRJNA558770_P_NODE_236316_length_234_cov_2.633166_g234311_i0 | PRJNA558770 | 236316 | 234 | 2.633166 | 6.16160844 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 55.8 | 4.57e-7 | NR | MBU6433821.1 | 2026887 | g234311 | i0 | 95.8 | 2.76923076923077 | 24 | 1 | 30.8 | 0 | 74 | 3 | 144 | 167 | MBU6433821.1 formylglycine-generating enzyme family protein [Nitrospirota bacterium] | diamond | 648 | 55.8 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 31374626 | 31374626 | PRJNA558770_P_NODE_185596_length_234_cov_4.376884_g183591_i0 | PRJNA558770 | 185596 | 234 | 4.376884 | 10.24190856 | Nitrospiraceae bacterium | 2026770 | Bacteria | Bacteria | 73.2 | 9.38e-15 | NR | HXT66619.1 | 2026770 | g183591 | i0 | 51.3 | 0.974358974358974 | 76 | 34 | 97.4 | 1 | 230 | 3 | 14 | 86 | HXT66619.1 hypothetical protein [Nitrospiraceae bacterium] | diamond | 228 | 73.2 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospiraceae bacterium | |||
| 31515335 | 31515335 | PRJNA558770_P_NODE_268176_length_234_cov_1.939698_g266171_i0 | PRJNA558770 | 268176 | 234 | 1.939698 | 4.53889332 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 45.8 | 0.00248 | NR | HNP42514.1 | 70125 | g266171 | i0 | 95.5 | 0.871794871794872 | 22 | 1 | 28.2 | 0 | 229 | 164 | 260 | 281 | HNP42514.1 DUF2184 domain-containing protein [Nitrospira sp.] | diamond | 204 | 45.8 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 31627452 | 31627452 | PRJNA558770_P_NODE_212216_length_234_cov_3.336683_g210211_i0 | PRJNA558770 | 212216 | 234 | 3.336683 | 7.80783822 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 55.1 | 8.97e-7 | NR | HKT36541.1 | 70125 | g210211 | i0 | 100 | 4.30769230769231 | 24 | 0 | 30.8 | 0 | 3 | 74 | 163 | 186 | HKT36541.1 lytic transglycosylase domain-containing protein [Nitrospira sp.] | diamond | 1008 | 55.1 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 31722327 | 31722327 | PRJNA558770_P_NODE_189117_length_234_cov_4.221106_g187112_i0 | PRJNA558770 | 189117 | 234 | 4.221106 | 9.87738804 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 54.3 | 2.5e-6 | NR | TAL08314.1 | 2026887 | g187112 | i0 | 35.5 | 1.93589743589744 | 76 | 25 | 97.4 | 1 | 3 | 230 | 116 | 167 | TAL08314.1 MAG: hypothetical protein EPO02_13230, partial [Nitrospirota bacterium] | diamond | 453 | 54.3 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 32052825 | 32052825 | PRJNA558770_P_NODE_203758_length_234_cov_3.643216_g201753_i0 | PRJNA558770 | 203758 | 234 | 3.643216 | 8.52512544 | Bacteria | 2 | Bacteria | Bacteria | 52.8 | 9.62e-6 | NR | MDF2756353.1 | 70125 | g201753 | i0 | 92 | 0.641025641025641 | 25 | 2 | 32.1 | 0 | 1 | 75 | 39 | 63 | MDF2756353.1 treT [Nitrospira sp.] | diamond | 150 | 52.8 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 32242991 | 32242991 | PRJNA558770_P_NODE_223618_length_234_cov_2.989950_g221613_i0 | PRJNA558770 | 223618 | 234 | 2.98995 | 6.996483 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 44.3 | 0.00917 | NR | MCK6501267.1 | 70125 | g221613 | i0 | 79.2 | 0.923076923076923 | 24 | 5 | 30.8 | 0 | 73 | 2 | 276 | 299 | MCK6501267.1 helicase RepA family protein [Nitrospira sp.] | diamond | 216 | 44.7 | 0.991051454138702 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 32306277 | 32306277 | PRJNA558770_P_NODE_280439_length_234_cov_1.728643_g278434_i0 | PRJNA558770 | 280439 | 234 | 1.728643 | 4.04502462 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 43.1 | 0.024 | NR | MEW6545230.1 | 2026887 | g278434 | i0 | 83.3 | 0.923076923076923 | 24 | 4 | 30.8 | 0 | 160 | 231 | 254 | 277 | MEW6545230.1 ACR3 family arsenite efflux transporter [Nitrospirota bacterium] | diamond | 216 | 43.1 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 32765482 | 32765482 | PRJNA558770_P_NODE_345960_length_233_cov_2.242424_g343955_i0 | PRJNA558770 | 345960 | 233 | 2.242424 | 5.22484792 | Nitrospiraceae bacterium | 2026770 | Bacteria | Bacteria | 52.8 | 8.74e-6 | NR | MBX9661038.1 | 2026770 | g343955 | i0 | 95.8 | 0.309012875536481 | 24 | 1 | 30.9 | 0 | 2 | 73 | 160 | 183 | MBX9661038.1 LysR family transcriptional regulator [Nitrospiraceae bacterium] | diamond | 72 | 52.8 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospiraceae bacterium | |||
| 32796817 | 32796817 | PRJNA558770_P_NODE_8540_length_612_cov_5.329289_g7069_i0 | PRJNA558770 | 8540 | 612 | 5.329289 | 32.61524868 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 74.3 | 1.39e-11 | NR | MDH5426877.1 | 2026887 | g7069 | i0 | 48.5 | 0.892156862745098 | 66 | 34 | 32.4 | 0 | 232 | 35 | 6 | 71 | MDH5426877.1 ATP-binding protein [Nitrospirota bacterium] | diamond | 546 | 74.3 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 32891344 | 32891344 | PRJNA558770_P_NODE_213380_length_234_cov_3.301508_g211375_i0 | PRJNA558770 | 213380 | 234 | 3.301508 | 7.72552872 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 66.6 | 1.13e-10 | NR | HKY71524.1 | 70125 | g211375 | i0 | 48.1 | 1.03846153846154 | 81 | 33 | 92.3 | 1 | 217 | 2 | 41 | 121 | HKY71524.1 dihydrolipoamide acetyltransferase family protein [Nitrospira sp.] | diamond | 243 | 66.6 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 32891356 | 32891356 | PRJNA558770_P_NODE_271020_length_234_cov_1.889447_g269015_i0 | PRJNA558770 | 271020 | 234 | 1.889447 | 4.42130598 | Nitrospiraceae bacterium | 2026770 | Bacteria | Bacteria | 42 | 0.0498 | NR | HXX73830.1 | 2026770 | g269015 | i0 | 78.3 | 0.294871794871795 | 23 | 5 | 29.5 | 0 | 164 | 232 | 28 | 50 | HXX73830.1 ATP-binding protein [Nitrospiraceae bacterium] | diamond | 69 | 42 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospiraceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;