RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA558770", tax_kingdom = "Methanobacteriati" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 2 ✖

tax_kingdom 1

  • Methanobacteriati · 2 ✖

bioproject 1

  • PRJNA558770 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28721181 28721181 PRJNA558770_P_NODE_272747_length_234_cov_1.854271_g270742_i0 PRJNA558770 272747 234 1.854271 4.33899414 Candidatus Poseidoniales archaeon 2163009 Archaea Archaea 56.6 2.35e-8   NR MEK9695182.1 2163009 g270742 i0 42.7 0.961538461538462 75 38 96.2 1 233 9 7 76 MEK9695182.1 hypothetical protein [Candidatus Poseidoniales archaeon] diamond 225 56.6 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon
32369477 32369477 PRJNA558770_P_NODE_334539_length_233_cov_5.101010_g332534_i0 PRJNA558770 334539 233 5.10101 11.8853533 Archaea 2157 Archaea Archaea 50.8 1.71e-5   NR HIM33118.1 2163009 g332534 i0 92 1.28755364806867 25 2 32.2 0 2 76 33 57 HIM33118.1 inorganic phosphate transporter [Candidatus Poseidoniales archaeon] diamond 300 50.8 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;