RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA558770", tax_kingdom = "Metazoa" and tax_phylum = "Porifera"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA558770 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16432354 16432354 PRJNA558770_P_NODE_32113_length_381_cov_5.026012_g30133_i0 PRJNA558770 32113 381 5.026012 19.14910572 Spongillidae 6050 Porifera other_Eukaryota 255 2.58e-63   NTclustered gi|2268710980|emb|OX176772.1| 6052 g30133 i0 100 39.6167979002625 138 0 74 0 244 381 295 432 Ephydatia muelleri partial 28S rRNA gene blastn 15094 255 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Spongillida Spongillidae Ephydatia Ephydatia muelleri
26934735 26934735 PRJNA558770_P_NODE_258042_length_234_cov_2.135678_g256037_i0 PRJNA558770 258042 234 2.135678 4.99748652 Metazoa 33208 Porifera other_Eukaryota 48.1 4.13e-4   NR KAI6652172.1 111878 g256037 i0 91.3 0.58974358974359 23 2 29.5 0 233 165 82 104 KAI6652172.1 hypothetical protein LOD99_7190 [Oopsacas minuta] diamond 138 48.1 1 Eukaryota Opisthokonta Metazoa Porifera Hexactinellida Lyssacinosida Leucopsacidae Oopsacas Oopsacas minuta

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;