RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA558770", tax_kingdom = "Bacillati" and tax_phylum = "Candidatus Dormiibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Dormiibacterota · 3 ✖

tax_kingdom 1

  • Bacillati · 3 ✖

bioproject 1

  • PRJNA558770 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27047312 27047312 PRJNA558770_P_NODE_173742_length_234_cov_4.959799_g171737_i0 PRJNA558770 173742 234 4.959799 11.60592966 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 44.7 0.00624   NR HZL07809.1 2052315 g171737 i0 68 0.948717948717949 25 8 32.1 0 75 1 162 186 HZL07809.1 L,D-transpeptidase [Candidatus Dormiibacterota bacterium] diamond 222 44.7 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
30409255 30409255 PRJNA558770_P_NODE_283053_length_234_cov_1.683417_g281048_i0 PRJNA558770 283053 234 1.683417 3.93919578 Bacteria 2 Bacteria Bacteria 44.7 0.00599   NR HWZ98204.1 2052315 g281048 i0 79.2 1.53846153846154 24 5 30.8 0 161 232 2 25 HWZ98204.1 (S)-ureidoglycine aminohydrolase [Candidatus Dormiibacterota bacterium] diamond 360 45.1 0.991130820399113 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
31406282 31406282 PRJNA558770_P_NODE_293436_length_234_cov_1.472362_g291431_i0 PRJNA558770 293436 234 1.472362 3.44532708 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 42.4 0.0352   NR HUY85131.1 2052315 g291431 i0 66.7 0.307692307692308 24 8 30.8 0 162 233 12 35 HUY85131.1 cytochrome o ubiquinol oxidase subunit III [Candidatus Dormiibacterota bacterium] diamond 72 42.4 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;