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contig_metadata

6 rows where bioproject = "PRJNA558770", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 6 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 6 ✖

bioproject 1

  • PRJNA558770 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27931766 27931766 PRJNA558770_P_NODE_281765_length_234_cov_1.708543_g279760_i0 PRJNA558770 281765 234 1.708543 3.99799062 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 44.3 0.00925   NR MBF0484406.1 2035772 g279760 i0 69.6 1.20512820512821 23 7 29.5 0 160 228 289 311 MBF0484406.1 dTDP-glucose 4,6-dehydratase [Candidatus Omnitrophota bacterium] diamond 282 44.3 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28373726 28373726 PRJNA558770_P_NODE_387986_length_184_cov_1.892617_g385981_i0 PRJNA558770 387986 184 1.892617 3.48241528 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 52.4 3.2e-6   NR MCG3176993.1 2035772 g385981 i0 38.3 0.978260869565217 60 36 96.2 1 177 1 31 90 MCG3176993.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 180 52.4 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28531802 28531802 PRJNA558770_P_NODE_261987_length_234_cov_2.060302_g259982_i0 PRJNA558770 261987 234 2.060302 4.82110668 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 43.1 0.00664   NR MFH0753257.1 2035772 g259982 i0 72 0.961538461538462 25 7 32.1 0 234 160 65 89 MFH0753257.1 thioredoxin [Candidatus Omnitrophota bacterium] diamond 225 43.1 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28910223 28910223 PRJNA558770_P_NODE_232588_length_234_cov_2.733668_g230583_i0 PRJNA558770 232588 234 2.733668 6.39678312 Candidatus Omnitrophica bacterium CG 2035772 Bacteria Bacteria 42.4 0.0467   NR PIU40223.1 1974742 g230583 i0 76 0.320512820512821 25 6 32.1 0 234 160 14 38 PIU40223.1 MAG: ATP-dependent DNA helicase RecG, partial [Candidatus Omnitrophica bacterium CG07_land_8_20_14_0_80_50_8] diamond 75 42.4 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophica bacterium CG07_land_8_20_14_0_80_50_8
31103879 31103879 PRJNA558770_P_NODE_274055_length_234_cov_1.834171_g272050_i0 PRJNA558770 274055 234 1.834171 4.29196014 Bacteria 2 Bacteria Bacteria 43.9 0.0134   NR OIO38356.1 1805288 g272050 i0 87.5 4.61538461538461 24 3 30.8 0 160 231 374 397 OIO38356.1 MAG: hypothetical protein AUJ72_02715 [Candidatus Omnitrophica bacterium CG1_02_46_14] diamond 1080 44.3 0.99097065462754 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophica bacterium CG1_02_46_14
31325223 31325223 PRJNA558770_P_NODE_201475_length_234_cov_3.728643_g199470_i0 PRJNA558770 201475 234 3.728643 8.72502462 Pseudomonadati 3379134 Bacteria Bacteria 43.9 0.00158   NR MBU1996754.1 2035772 g199470 i0 76 4.44871794871795 25 6 32.1 0 160 234 38 62 MBU1996754.1 S-adenosylmethionine decarboxylase [Candidatus Omnitrophota bacterium] diamond 1041 43.9 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;