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contig_metadata

18 rows where bioproject = "PRJNA557895" and tax_phylum = "Bacteroidota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Bacteroidota · 18 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA557895 · 18 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
536315 536315 PRJNA557895_P_NODE_37061_length_162_cov_0.902655_g36706_i0 PRJNA557895 37061 162 0.902655 1.4623011 Sphingobacterium spiritivorum 258 Bacteria Bacteria 52.8 0.013   NTclustered gi|1958211526|gb|CP068082.1| 258 g36706 i0 100 0.518518518518518 28 0 17 0 131 158 385625 385652 Sphingobacterium spiritivorum strain FDAARGOS_1146 chromosome, complete genome blastn 84 52.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Sphingobacterium Sphingobacterium spiritivorum
1811367 1811367 PRJNA557895_P_NODE_12142_length_265_cov_0.944444_g11787_i0 PRJNA557895 12142 265 0.944444 2.5027766 Winogradskyella sp. PAMC22761 2762324 Bacteria Bacteria 56.5 0.002   NTclustered gi|1896702836|gb|CP060297.1| 2762324 g11787 i0 100 0.113207547169811 30 0 11 0 1 30 2721675 2721704 Winogradskyella sp. PAMC22761 chromosome, complete genome blastn 30 56.5 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Winogradskyella Winogradskyella sp. PAMC22761
2403762 2403762 PRJNA557895_P_NODE_3362_length_530_cov_2.076923_g3018_i0 PRJNA557895 3362 530 2.076923 11.0076919 Cloacibacterium 501783 Bacteria Bacteria 929 0   NTclustered gi|1527207946|gb|CP034157.1| 237258 g3018 i0 98.302 430.503773584906 530 9 100 0 1 530 131642 131113 Cloacibacterium normanense strain NRS-1 chromosome, complete genome blastn 228167 929 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Cloacibacterium Cloacibacterium normanense
4956375 4956375 PRJNA557895_P_NODE_23944_length_189_cov_1.635714_g23589_i0 PRJNA557895 23944 189 1.635714 3.09149946 Cloacibacterium 501783 Bacteria Bacteria 344 2.39e-90   NTclustered gi|1527207946|gb|CP034157.1| 237258 g23589 i0 99.471 527.216931216931 189 1 100 0 1 189 130460 130272 Cloacibacterium normanense strain NRS-1 chromosome, complete genome blastn 99644 344 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Cloacibacterium Cloacibacterium normanense
12607324 12607324 PRJNA557895_P_NODE_29130_length_169_cov_1.275000_g28775_i0 PRJNA557895 29130 169 1.275 2.15475 Weeksellaceae 2762318 Bacteria Bacteria 285 1.28e-72   NTclustered gi|1750497007|gb|CP043634.1| 247 g28775 i0 97.041 635.970414201183 169 5 100 0 1 169 228920 229088 Empedobacter brevis strain SE1-3 chromosome, complete genome blastn 107479 285 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Empedobacter Empedobacter brevis
17706289 17706289 PRJNA557895_P_NODE_32254_length_165_cov_1.887931_g31899_i0 PRJNA557895 32254 165 1.887931 3.11508615 Cloacibacterium 501783 Bacteria Bacteria 305 9.59e-79   NTclustered gi|1527207946|gb|CP034157.1| 237258 g31899 i0 100 465.666666666667 165 0 100 0 1 165 129639 129475 Cloacibacterium normanense strain NRS-1 chromosome, complete genome blastn 76835 305 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Cloacibacterium Cloacibacterium normanense
18387916 18387916 PRJNA557895_P_NODE_23495_length_191_cov_1.436620_g23140_i0 PRJNA557895 23495 191 1.43662 2.7439442 Blattabacterium cuenoti 1653831 Bacteria Bacteria 108 3.46e-19   NTclustered gi|1403290361|dbj|AP014608.1| 1457030 g23140 i0 90.244 47.7486910994764 82 8 43 0 20 101 418074 417993 Blattabacterium cuenoti STAT DNA, complete genome, strain: STAT blastn 9120 108 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Blattabacteriaceae Blattabacterium Blattabacterium cuenoti
22213233 22213233 PRJNA557895_P_NODE_30458_length_167_cov_0.864407_g30103_i0 PRJNA557895 30458 167 0.864407 1.44355969 Winogradskyella forsetii 2686077 Bacteria Bacteria 52.8 0.014   NTclustered gi|1866746736|gb|CP053350.1| 2686077 g30103 i0 100 0.167664670658683 28 0 17 0 117 144 3305451 3305424 Winogradskyella forsetii strain SW133 chromosome, complete genome blastn 28 52.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Winogradskyella Winogradskyella forsetii
22805499 22805499 PRJNA557895_P_NODE_23058_length_193_cov_1.416667_g22703_i0 PRJNA557895 23058 193 1.416667 2.73416731 Ornithobacterium 28250 Bacteria Bacteria 296 6.96e-76   NTclustered gi|1560269301|gb|CP035107.1| 28251 g22703 i0 94.301 443.580310880829 193 11 100 0 1 193 365641 365833 Ornithobacterium rhinotracheale strain FARPER-174b chromosome, complete genome blastn 85611 296 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Ornithobacterium Ornithobacterium rhinotracheale
24762491 24762491 PRJNA557895_P_NODE_3380_length_528_cov_1.396660_g3036_i0 PRJNA557895 3380 528 1.39666 7.3743648 Weeksellaceae bacterium 2823802 Bacteria Bacteria 662 0   NTclustered gi|2488203225|emb|OX460916.1| 2823802 g3036 i0 91.207 287.030303030303 489 40 99 3 42 528 4890 4403 Weeksellaceae bacterium strain MIP2422 genome assembly, chromosome: MIP2422_c1 blastn 151552 662 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae   Weeksellaceae bacterium
25354605 25354605 PRJNA557895_P_NODE_2660_length_621_cov_2.629371_g2325_i0 PRJNA557895 2660 621 2.629371 16.32839391 Cloacibacterium 501783 Bacteria Bacteria 1125 0   NTclustered gi|1527207946|gb|CP034157.1| 237258 g2325 i0 99.356 474.636070853462 621 4 100 0 1 621 2157700 2158320 Cloacibacterium normanense strain NRS-1 chromosome, complete genome blastn 294749 1125 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Cloacibacterium Cloacibacterium normanense
26903258 26903258 PRJNA557895_P_NODE_16501_length_226_cov_1.717514_g16146_i0 PRJNA557895 16501 226 1.717514 3.88158164 Pseudomonadati 3379134 Bacteria Bacteria 72.8 6.77e-13   NR HAY32653.1 1898104 g16146 i0 66.7 3.58407079646018 54 18 71.7 0 162 1 1 54 HAY32653.1 acetyl-CoA C-acetyltransferase [Bacteroidota bacterium] diamond 810 73.2 0.994535519125683 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
28292959 28292959 PRJNA557895_P_NODE_25846_length_181_cov_2.318182_g25491_i0 PRJNA557895 25846 181 2.318182 4.19590942 Pseudomonadati 3379134 Bacteria Bacteria 86.3 6.22e-18   NR MBK7570623.1 1898104 g25491 i0 65 14.4530386740331 60 21 99.4 0 1 180 8 67 MBK7570623.1 adenosylhomocysteinase [Bacteroidota bacterium] diamond 2616 87 0.991954022988506 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
28468640 28468640 PRJNA557895_P_NODE_18486_length_215_cov_0.921687_g18131_i0 PRJNA557895 18486 215 0.921687 1.98162705 Saprospiraceae bacterium 2202734 Bacteria Bacteria 42 0.0493   NR NOT37954.1 2202734 g18131 i0 31.1 0.851162790697674 61 35 75.3 1 50 211 577 637 NOT37954.1 hypothetical protein [Saprospiraceae bacterium] diamond 183 42 1 Bacteria FCB group Pseudomonadati Bacteroidota Saprospiria Saprospirales Saprospiraceae   Saprospiraceae bacterium
29903504 29903504 PRJNA557895_P_NODE_35611_length_163_cov_0.894737_g35256_i0 PRJNA557895 35611 163 0.894737 1.45842131 Moheibacter 1572763 Bacteria Bacteria 79 2.11e-16   NR WP_354510936.1 1628251 g35256 i0 66 3.86503067484663 53 18 97.5 0 162 4 118 170 WP_354510936.1 porin family protein [Moheibacter stercoris] diamond 630 79.3 0.996216897856242 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Moheibacter Moheibacter stercoris
30141623 30141623 PRJNA557895_P_NODE_24512_length_187_cov_1.108696_g24157_i0 PRJNA557895 24512 187 1.108696 2.07326152 Flavobacterium sp. 239 Bacteria Bacteria 41.6 0.0435   NR MDK2772804.1 239 g24157 i0 44.4 0.72192513368984 45 23 72.2 1 42 176 32 74 MDK2772804.1 hypothetical protein [Flavobacterium sp.] diamond 135 41.6 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp.
31437630 31437630 PRJNA557895_P_NODE_23056_length_193_cov_1.416667_g22701_i0 PRJNA557895 23056 193 1.416667 2.73416731 Chitinophagaceae bacterium 1869212 Bacteria Bacteria 43.1 0.0132   NR RYG34286.1 1869212 g22701 i0 40 0.77720207253886 50 29 77.7 1 26 175 131 179 RYG34286.1 MAG: RNA methyltransferase [Chitinophagaceae bacterium] diamond 150 43.1 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae   Chitinophagaceae bacterium
31658937 31658937 PRJNA557895_P_NODE_36077_length_163_cov_0.894737_g35722_i0 PRJNA557895 36077 163 0.894737 1.45842131 Salibacteraceae bacterium 2832350 Bacteria Bacteria 45.1 0.00188   NR MFT6441495.1 2832350 g35722 i0 44.4 1.71165644171779 45 25 82.8 0 143 9 364 408 MFT6441495.1 gliding motility-associated-like protein [Salibacteraceae bacterium] diamond 279 45.1 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Salibacteraceae   Salibacteraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;