RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

6 rows where bioproject = "PRJNA557895" and tax_kingdom = "Orthornavirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Orthornavirae · 6 ✖

bioproject 1

  • PRJNA557895 · 6 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27110264 27110264 PRJNA557895_P_NODE_23022_length_193_cov_2.125000_g22667_i0 PRJNA557895 23022 193 2.125 4.10125 Flumine marna-like virus 6 2941474 Viruses Viruses 69.3 8.31e-12   NR UQB76035.1 2941474 g22667 i0 46.9 0.994818652849741 64 34 99.5 0 193 2 2441 2504 UQB76035.1 nonstructural protein [Flumine marna-like virus 6] diamond 192 69.3 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Marnaviridae   Flumine marna-like virus 6
28387734 28387734 PRJNA557895_P_NODE_16786_length_225_cov_0.772727_g16431_i0 PRJNA557895 16786 225 0.772727 1.73863575 Viruses 10239 Viruses Viruses 58.9 5.96e-8   NR QJI53795.1 2715102 g16431 i0 43.8 4.34666666666667 64 32 85.3 1 1 192 592 651 QJI53795.1 MAG: hypothetical protein 2 [Marnaviridae sp.] diamond 978 58.9 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Marnaviridae   Marnaviridae sp.
30661667 30661667 PRJNA557895_P_NODE_37393_length_162_cov_0.902655_g37038_i0 PRJNA557895 37393 162 0.902655 1.4623011 Viruses 10239 Viruses Viruses 64.7 2.28e-10   NR WZH59296.1 3130218 g37038 i0 52.8 1.90740740740741 53 25 98.1 0 162 4 1079 1131 WZH59296.1 MAG: replicase polyprotein [Ripiwisk virus] diamond 309 65.1 0.993855606758833 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Marnaviridae   Ripiwisk virus
31817139 31817139 PRJNA557895_P_NODE_24757_length_186_cov_1.116788_g24402_i0 PRJNA557895 24757 186 1.116788 2.07722568 Mute swan feces associated picorna-like virus 19 2832192 Viruses Viruses 77.4 1.03e-14   NR QUS52722.1 2832192 g24402 i0 50 0.967741935483871 60 30 96.8 0 2 181 12 71 QUS52722.1 hypothetical protein 2 [Mute swan feces associated picorna-like virus 19] diamond 180 77.4 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Mute swan feces associated picorna-like virus 19
32133794 32133794 PRJNA557895_P_NODE_37938_length_161_cov_1.776786_g37583_i0 PRJNA557895 37938 161 1.776786 2.86062546 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 48.9 8.11e-5   NR QJI53566.1 3003959 g37583 i0 43.1 0.950310559006211 51 29 95 0 7 159 462 512 QJI53566.1 MAG: capsid protein [Picornavirales sp.] diamond 153 48.9 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
32702419 32702419 PRJNA557895_P_NODE_36020_length_163_cov_0.894737_g35665_i0 PRJNA557895 36020 163 0.894737 1.45842131 Penaeus japonicus marna-like virus2 3132547 Viruses Viruses 53.5 1.89e-6   NR WWZ85606.1 3132547 g35665 i0 54 1.89570552147239 50 23 92 0 3 152 304 353 WWZ85606.1 capsid protein [Penaeus japonicus marna-like virus2] diamond 309 53.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Marnaviridae   Penaeus japonicus marna-like virus2

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;