RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA557895", tax_kingdom = "Fungi" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA557895 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10056831 10056831 PRJNA557895_P_NODE_10888_length_278_cov_1.113537_g10533_i0 PRJNA557895 10888 278 1.113537 3.09563286 Dispira 78922 Fungi Fungi 141 1.36e-38   NR KAJ1952984.1 1520584 g10533 i0 70.7 9.84172661870504 92 27 99.3 0 2 277 234 325 KAJ1952984.1 hypothetical protein IWQ62_006096 [Dispira parvispora] diamond 2736 142 0.992957746478873 Eukaryota Opisthokonta Fungi Zoopagomycota Dimargaritomycetes Dimargaritales Dimargaritaceae Dispira Dispira parvispora
27110265 27110265 PRJNA557895_P_NODE_26662_length_178_cov_1.581395_g26307_i0 PRJNA557895 26662 178 1.581395 2.8148831 Conidiobolus coronatus NRRL 28638 796925 Fungi Fungi 73.6 2.15e-13   NR KXN67963.1 796925 g26307 i0 55.9 3.99438202247191 59 26 99.4 0 177 1 750 808 KXN67963.1 leucyl-tRNA synthetase [Conidiobolus coronatus NRRL 28638] diamond 711 73.6 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Ancylistaceae Conidiobolus Conidiobolus coronatus
32734156 32734156 PRJNA557895_P_NODE_23960_length_189_cov_1.457143_g23605_i0 PRJNA557895 23960 189 1.457143 2.75400027 Thamnocephalis sphaerospora 78915 Fungi Fungi 76.3 1.88e-16   NR RKP08367.1 78915 g23605 i0 67.3 2.44444444444444 52 17 82.5 0 189 34 27 78 RKP08367.1 hypothetical protein THASP1DRAFT_29824 [Thamnocephalis sphaerospora] diamond 462 76.3 1 Eukaryota Opisthokonta Fungi Zoopagomycota Zoopagomycetes Zoopagales Sigmoideomycetaceae Thamnocephalis Thamnocephalis sphaerospora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;