contig_metadata
5 rows where bioproject = "PRJNA557895" and tax_clade = "Amoebozoa"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3679601 | 3679601 | PRJNA557895_P_NODE_3343_length_532_cov_2.571429_g2999_i0 | PRJNA557895 | 3343 | 532 | 2.571429 | 13.68000228 | Entamoeba | 5758 | Evosea | other_Eukaryota | 54.7 | 0.015 | NTclustered | gi|67480644|ref|XM_650580.1| | 294381 | g2999 | i0 | 100 | 0.109022556390977 | 29 | 0 | 5 | 0 | 161 | 189 | 283 | 255 | Entamoeba histolytica HM-1:IMSS acetyltransferase, putative (EHI_096770), partial mRNA | blastn | 58 | 54.7 | 1 | Eukaryota | Amoebozoa | Evosea | Mastigamoebida | Entamoebidae | Entamoeba | Entamoeba histolytica | |||
| 17113621 | 17113621 | PRJNA557895_P_NODE_16814_length_224_cov_1.702857_g16459_i0 | PRJNA557895 | 16814 | 224 | 1.702857 | 3.81439968 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 121 | 3.2699999999999995e-31 | NR | XP_003294737.1 | 5786 | g16459 | i0 | 77 | 72.3482142857143 | 74 | 17 | 99.1 | 0 | 222 | 1 | 31 | 104 | XP_003294737.1 pyruvate dehydrogenase E1 beta subunit [Dictyostelium purpureum] | diamond | 16206 | 122 | 0.991803278688525 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Dictyosteliales | Dictyosteliaceae | Dictyostelium | Dictyostelium purpureum | ||
| 18388110 | 18388110 | PRJNA557895_P_NODE_31915_length_166_cov_0.871795_g31560_i0 | PRJNA557895 | 31915 | 166 | 0.871795 | 1.4471797 | Protophysarum sp. PV64 | 1215983 | Evosea | other_Eukaryota | 252 | 1.28e-62 | NTclustered | gi|399764200|gb|JQ271711.1| | 1215983 | g31560 | i0 | 94.012 | 1.68072289156627 | 167 | 9 | 100 | 1 | 1 | 166 | 855 | 689 | Protophysarum sp. PV64 18S ribosomal RNA gene, partial sequence | blastn | 279 | 252 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Physariida | Physaraceae | Protophysarum | Protophysarum sp. PV64 | ||
| 28247278 | 28247278 | PRJNA557895_P_NODE_30706_length_167_cov_0.864407_g30351_i0 | PRJNA557895 | 30706 | 167 | 0.864407 | 1.44355969 | Pelomyxa schiedti | 1580589 | Evosea | other_Eukaryota | 47.8 | 2.24e-4 | NR | KAH3759439.1 | 1580589 | g30351 | i0 | 34 | 1.81437125748503 | 53 | 35 | 95.2 | 0 | 5 | 163 | 197 | 249 | KAH3759439.1 actin-binding protein, cofilin/tropomyosin family protein [Pelomyxa schiedti] | diamond | 303 | 47.8 | 1 | Eukaryota | Amoebozoa | Evosea | Pelobiontida | Pelomyxidae | Pelomyxa | Pelomyxa schiedti | |||
| 29447035 | 29447035 | PRJNA557895_P_NODE_34610_length_164_cov_0.886957_g34255_i0 | PRJNA557895 | 34610 | 164 | 0.886957 | 1.45460948 | Acanthamoeba castellanii str. Neff | 1257118 | Discosea | other_Eukaryota | 41.6 | 0.0335 | NR | XP_004367881.1 | 1257118 | g34255 | i0 | 42.1 | 0.695121951219512 | 38 | 22 | 69.5 | 0 | 163 | 50 | 569 | 606 | XP_004367881.1 neuroblastomaamplified protein, putative [Acanthamoeba castellanii str. Neff] | diamond | 114 | 41.6 | 1 | Eukaryota | Amoebozoa | Discosea | Longamoebia | Acanthamoebidae | Acanthamoeba | Acanthamoeba castellanii |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;