RNAquarium Metadata Server
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contig_metadata

37 rows where bioproject = "PRJNA557436" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 37 ✖

tax_clade 1

bioproject 1

  • PRJNA557436 · 37 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26635578 26635578 PRJNA557436_S_NODE_1441_length_307_cov_2.595588_g1393_i0 PRJNA557436 1441 307 2.595588 7.96845516 Minisyncoccota bacterium 2053589 Bacteria Bacteria 134 5.68e-34   NR MFA5388022.1 2053589 g1393 i0 63.7 1.99348534201954 102 36 99.7 1 1 306 766 866 MFA5388022.1 DNA polymerase [Candidatus Paceibacterota bacterium] diamond 612 134 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
26667042 26667042 PRJNA557436_S_NODE_261_length_659_cov_2.221154_g226_i0 PRJNA557436 261 659 2.221154 14.63740486 Minisyncoccota bacterium 2053589 Bacteria Bacteria 229 2.44e-69   NR MDD2657956.1 2053589 g226 i0 77.1 0.714719271623672 157 35 71 1 472 5 1 157 MDD2657956.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 471 229 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
26857656 26857656 PRJNA557436_S_NODE_1361_length_314_cov_2.448029_g1313_i0 PRJNA557436 1361 314 2.448029 7.68681106 Minisyncoccota bacterium 2053589 Bacteria Bacteria 58.2 3.39e-7   NR MFA6049709.1 2053589 g1313 i0 35.4 2.8375796178344 99 60 94.6 1 313 17 192 286 MFA6049709.1 LamG domain-containing protein [Candidatus Paceibacterota bacterium] diamond 891 58.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27345999 27345999 PRJNA557436_S_NODE_5223_length_181_cov_2.890411_g5175_i0 PRJNA557436 5223 181 2.890411 5.23164391 Bacteria 2 Bacteria Bacteria 56.2 5.47e-8   NR HMA78718.1 2053589 g5175 i0 47.4 4.85635359116022 57 26 94.5 1 171 1 18 70 HMA78718.1 phage tail tube protein [Candidatus Paceibacterota bacterium] diamond 879 56.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27679399 27679399 PRJNA557436_S_NODE_624_length_447_cov_2.580097_g576_i0 PRJNA557436 624 447 2.580097 11.53303359 Minisyncoccota bacterium 2053589 Bacteria Bacteria 180 1.16e-53   NR HEY6020937.1 2053589 g576 i0 57.2 1.91275167785235 145 62 97.3 0 2 436 118 262 HEY6020937.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 855 180 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27805544 27805544 PRJNA557436_S_NODE_2304_length_249_cov_2.813084_g2256_i0 PRJNA557436 2304 249 2.813084 7.00457916 Minisyncoccota bacterium 2053589 Bacteria Bacteria 88.2 4.05e-18   NR MFA6049709.1 2053589 g2256 i0 48.8 0.963855421686747 80 40 96.4 1 2 241 119 197 MFA6049709.1 LamG domain-containing protein [Candidatus Paceibacterota bacterium] diamond 240 88.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27868398 27868398 PRJNA557436_S_NODE_905_length_376_cov_2.486804_g857_i0 PRJNA557436 905 376 2.486804 9.35038304 Minisyncoccota bacterium 2053589 Bacteria Bacteria 58.5 1.93e-8   NR MFA6050913.1 2053589 g857 i0 44.4 0.646276595744681 81 42 64.6 2 65 307 5 82 MFA6050913.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 243 58.5 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28121109 28121109 PRJNA557436_S_NODE_565_length_469_cov_3.304147_g517_i0 PRJNA557436 565 469 3.304147 15.49644943 Minisyncoccota bacterium 2053589 Bacteria Bacteria 192 1.15e-58   NR MFA6050950.1 2053589 g517 i0 60.3 0.997867803837953 156 61 99.1 1 3 467 5 160 MFA6050950.1 Fe-Mn family superoxide dismutase [Candidatus Paceibacterota bacterium] diamond 468 192 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28468630 28468630 PRJNA557436_S_NODE_7026_length_164_cov_1.713178_g6978_i0 PRJNA557436 7026 164 1.713178 2.80961192 Minisyncoccota bacterium 2053589 Bacteria Bacteria 42.7 0.0126   NR MBP9771447.1 2053589 g6978 i0 47.2 0.969512195121951 53 23 87.8 1 1 144 10 62 MBP9771447.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 159 42.7 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28594853 28594853 PRJNA557436_S_NODE_207_length_728_cov_2.593074_g175_i0 PRJNA557436 207 728 2.593074 18.87757872 Minisyncoccota bacterium 2053589 Bacteria Bacteria 125 6.56e-30   NR MFA6050909.1 2053589 g175 i0 38.2 0.733516483516483 178 108 73.4 2 194 727 6 181 MFA6050909.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 534 125 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28878762 28878762 PRJNA557436_S_NODE_308_length_624_cov_2.641766_g270_i0 PRJNA557436 308 624 2.641766 16.48461984 Minisyncoccota bacterium 2053589 Bacteria Bacteria 57 5.06e-7   NR MFA6050911.1 2053589 g270 i0 32.9 0.336538461538462 70 47 33.7 0 217 8 1 70 MFA6050911.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 210 57 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29068481 29068481 PRJNA557436_S_NODE_448_length_524_cov_2.715746_g404_i0 PRJNA557436 448 524 2.715746 14.23050904 Minisyncoccota bacterium 2053589 Bacteria Bacteria 75.5 2.81e-12   NR MFA6432960.1 2053589 g404 i0 50 0.435114503816794 76 38 43.5 0 516 289 613 688 MFA6432960.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 228 75.5 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29099979 29099979 PRJNA557436_S_NODE_188_length_759_cov_4.863260_g157_i0 PRJNA557436 188 759 4.86326 36.9121434 Minisyncoccota bacterium 2053589 Bacteria Bacteria 90.9 2.26e-19   NR MFA6608956.1 2053589 g157 i0 53.5 0.683794466403162 86 40 34 0 748 491 7 92 MFA6608956.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 519 90.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29163292 29163292 PRJNA557436_S_NODE_2969_length_224_cov_1.560847_g2921_i0 PRJNA557436 2969 224 1.560847 3.49629728 Minisyncoccota bacterium 2053589 Bacteria Bacteria 79.3 3.54e-15   NR MDD2657956.1 2053589 g2921 i0 92.9 0.5625 42 3 56.3 0 220 95 439 480 MDD2657956.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 126 79.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29226449 29226449 PRJNA557436_S_NODE_3629_length_207_cov_1.831395_g3581_i0 PRJNA557436 3629 207 1.831395 3.79098765 Minisyncoccota bacterium 2053589 Bacteria Bacteria 64.7 5.98e-11   NR MBP7007083.1 2053589 g3581 i0 96.9 0.971014492753623 32 1 46.4 0 87 182 133 164 MBP7007083.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 201 64.7 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29226461 29226461 PRJNA557436_S_NODE_729_length_416_cov_3.107612_g681_i0 PRJNA557436 729 416 3.107612 12.92766592 Minisyncoccota bacterium 2053589 Bacteria Bacteria 74.3 2.26e-12   NR HEY6019794.1 2053589 g681 i0 39.8 0.778846153846154 108 53 77.2 4 1 321 573 669 HEY6019794.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 324 74.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29398155 29398155 PRJNA557436_S_NODE_6609_length_167_cov_2.219697_g6561_i0 PRJNA557436 6609 167 2.219697 3.70689399 Bacillati 1783272 Bacteria Bacteria 65.9 1.94e-11   NR MDI9407625.1 2053589 g6561 i0 50 3.01796407185629 56 27 98.8 1 165 1 36 91 MDI9407625.1 ERF family protein [Candidatus Paceibacterota bacterium] diamond 504 65.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29524533 29524533 PRJNA557436_S_NODE_4730_length_187_cov_2.388158_g4682_i0 PRJNA557436 4730 187 2.388158 4.46585546 root 1 Root_unresolved Root_unresolved 102 2.26e-23   NR MFA5388022.1 2053589 g4682 i0 81.4 1.89304812834225 59 11 94.7 0 3 179 864 922 MFA5388022.1 DNA polymerase [Candidatus Paceibacterota bacterium] diamond 354 103 0.990291262135922 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29604726 29604726 PRJNA557436_S_NODE_1410_length_309_cov_2.788321_g1362_i0 PRJNA557436 1410 309 2.788321 8.61591189 Minisyncoccota bacterium 2053589 Bacteria Bacteria 49.7 2.76e-4   NR MFA6049799.1 2053589 g1362 i0 29.3 0.893203883495146 92 61 88.3 2 288 16 107 195 MFA6049799.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 276 49.7 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29604747 29604747 PRJNA557436_S_NODE_930_length_371_cov_3.214286_g882_i0 PRJNA557436 930 371 3.214286 11.92500106 Minisyncoccota bacterium 2053589 Bacteria Bacteria 120 1.34e-29   NR MFA6050909.1 2053589 g882 i0 50.8 0.954177897574124 118 58 95.4 0 8 361 181 298 MFA6050909.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 354 120 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30092738 30092738 PRJNA557436_S_NODE_4152_length_197_cov_1.654321_g4104_i0 PRJNA557436 4152 197 1.654321 3.25901237 Bacteria 2 Bacteria Bacteria 48.5 1.87e-4   NR HUO50194.1 2053589 g4104 i0 66.7 0.83756345177665 27 9 41.1 0 73 153 419 445 HUO50194.1 fibronectin type III domain-containing protein [Candidatus Paceibacterota bacterium] diamond 165 48.5 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30173540 30173540 PRJNA557436_S_NODE_6472_length_168_cov_2.932331_g6424_i0 PRJNA557436 6472 168 2.932331 4.92631608 Minisyncoccota bacterium 2053589 Bacteria Bacteria 60.1 1.06e-8   NR MFA5388022.1 2053589 g6424 i0 65.1 0.767857142857143 43 15 76.8 0 1 129 655 697 MFA5388022.1 DNA polymerase [Candidatus Paceibacterota bacterium] diamond 129 60.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30204940 30204940 PRJNA557436_S_NODE_492_length_503_cov_2.485043_g444_i0 PRJNA557436 492 503 2.485043 12.49976629 Minisyncoccota bacterium 2053589 Bacteria Bacteria 79.3 5.24e-14   NR MFA6049799.1 2053589 g444 i0 47.3 0.554671968190855 93 44 53.1 2 3 269 222 313 MFA6049799.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 279 79.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30332105 30332105 PRJNA557436_S_NODE_872_length_383_cov_3.698276_g824_i0 PRJNA557436 872 383 3.698276 14.16439708 Minisyncoccota bacterium 2053589 Bacteria Bacteria 76.6 9.82e-15   NR MFA6049732.1 2053589 g824 i0 45.8 0.751958224543081 96 48 72.1 3 380 105 29 124 MFA6049732.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 288 76.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30900461 30900461 PRJNA557436_S_NODE_7554_length_160_cov_2.424000_g7506_i0 PRJNA557436 7554 160 2.424 3.8784 Minisyncoccota bacterium 2053589 Bacteria Bacteria 94.4 6.540000000000001e-21   NR MDD2657956.1 2053589 g7506 i0 90.6 0.99375 53 5 99.4 0 159 1 220 272 MDD2657956.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 159 94.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31152670 31152670 PRJNA557436_S_NODE_3475_length_210_cov_3.057143_g3427_i0 PRJNA557436 3475 210 3.057143 6.4200003 Minisyncoccota bacterium 2053589 Bacteria Bacteria 85.9 5.99e-20   NR MFA6050949.1 2053589 g3427 i0 65.2 0.942857142857143 66 23 94.3 0 210 13 29 94 MFA6050949.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 198 85.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31215877 31215877 PRJNA557436_S_NODE_7315_length_162_cov_1.488189_g7267_i0 PRJNA557436 7315 162 1.488189 2.41086618 Minisyncoccota bacterium 2053589 Bacteria Bacteria 47.8 2.17e-4   NR MFA6158974.1 2053589 g7267 i0 69.2 0.481481481481481 26 8 48.1 0 162 85 458 483 MFA6158974.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 78 47.8 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31279410 31279410 PRJNA557436_S_NODE_2675_length_233_cov_2.671717_g2627_i0 PRJNA557436 2675 233 2.671717 6.22510061 Minisyncoccota bacterium 2053589 Bacteria Bacteria 62.8 2.3e-9   NR MFA6049714.1 2053589 g2627 i0 46.7 1.59656652360515 60 32 77.3 0 223 44 150 209 MFA6049714.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 372 62.8 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31293569 31293569 PRJNA557436_S_NODE_9255_length_151_cov_2.172414_g9207_i0 PRJNA557436 9255 151 2.172414 3.28034514 Bacteria 2 Bacteria Bacteria 62.4 1.21e-9   NR MFA6095642.1 2053589 g9207 i0 64.4 2.72185430463576 45 16 89.4 0 4 138 145 189 MFA6095642.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 411 62.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31596076 31596076 PRJNA557436_S_NODE_5196_length_182_cov_1.360544_g5148_i0 PRJNA557436 5196 182 1.360544 2.47619008 Minisyncoccota bacterium 2053589 Bacteria Bacteria 72.4 6.47e-15   NR MFA7171571.1 2053589 g5148 i0 53.6 1.84615384615385 56 26 92.3 0 172 5 10 65 MFA7171571.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 336 72.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32038752 32038752 PRJNA557436_S_NODE_1558_length_296_cov_1.421456_g1510_i0 PRJNA557436 1558 296 1.421456 4.20750976 Minisyncoccota bacterium 2053589 Bacteria Bacteria 45.4 0.00585   NR HRH55921.1 2053589 g1510 i0 66.7 0.334459459459459 33 11 33.4 0 25 123 188 220 HRH55921.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 99 45.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32070341 32070341 PRJNA557436_S_NODE_4538_length_190_cov_3.283871_g4490_i0 PRJNA557436 4538 190 3.283871 6.2393549 Minisyncoccota bacterium 2053589 Bacteria Bacteria 65.1 1e-10   NR MFA6049718.1 2053589 g4490 i0 56.7 1.89473684210526 60 26 94.7 0 182 3 103 162 MFA6049718.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 360 65.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32070344 32070344 PRJNA557436_S_NODE_58_length_1417_cov_4.561505_g47_i0 PRJNA557436 58 1417 4.561505 64.63652585 Minisyncoccota bacterium 2053589 Bacteria Bacteria 69.3 3.99e-9   NR MFA6608954.1 2053589 g47 i0 44.8 0.402258292166549 96 46 19.9 3 1385 1104 171 261 MFA6608954.1 RNA polymerase sigma factor RpoD/SigA [Candidatus Paceibacterota bacterium] diamond 570 69.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32418492 32418492 PRJNA557436_S_NODE_9379_length_151_cov_1.241379_g9331_i0 PRJNA557436 9379 151 1.241379 1.87448229 Minisyncoccota bacterium 2053589 Bacteria Bacteria 75.9 8.69e-16   NR MDP7368636.1 2053589 g9331 i0 81.4 2.60264900662252 43 8 85.4 0 2 130 97 139 MDP7368636.1 site-specific DNA-methyltransferase [Candidatus Paceibacterota bacterium] diamond 393 75.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32450289 32450289 PRJNA557436_S_NODE_6039_length_172_cov_2.467153_g5991_i0 PRJNA557436 6039 172 2.467153 4.24350316 Minisyncoccota bacterium 2053589 Bacteria Bacteria 87 1.98e-18   NR HEY6019333.1 2053589 g5991 i0 70.9 1.93604651162791 55 16 95.9 0 165 1 60 114 HEY6019333.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 333 87 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32545196 32545196 PRJNA557436_S_NODE_8219_length_156_cov_1.818182_g8171_i0 PRJNA557436 8219 156 1.818182 2.83636392 Minisyncoccota bacterium 2053589 Bacteria Bacteria 71.2 1.03e-12   NR MFA6049709.1 2053589 g8171 i0 57.7 2 52 22 100 0 156 1 981 1032 MFA6049709.1 LamG domain-containing protein [Candidatus Paceibacterota bacterium] diamond 312 71.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32734122 32734122 PRJNA557436_S_NODE_120_length_931_cov_3.042411_g98_i0 PRJNA557436 120 931 3.042411 28.32484641 Minisyncoccota bacterium 2053589 Bacteria Bacteria 123 3.0500000000000003e-27   NR HEY6019794.1 2053589 g98 i0 31 0.934479054779807 290 170 90.5 6 915 73 271 539 HEY6019794.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 870 123 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;