RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA557436" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA557436 · 8 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26825839 26825839 PRJNA557436_S_NODE_141_length_861_cov_3.081114_g115_i0 PRJNA557436 141 861 3.081114 26.52839154 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 64.7 1.24e-8   NR MCX5757649.1 2030809 g115 i0 47.3 0.529616724738676 74 36 25.8 2 2 223 91 161 MCX5757649.1 TnsA endonuclease N-terminal domain-containing protein [Candidatus Hydrogenedentota bacterium] diamond 456 64.7 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
26952104 26952104 PRJNA557436_S_NODE_9602_length_150_cov_1.121739_g9554_i0 PRJNA557436 9602 150 1.121739 1.6826085 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 90.1 3.04e-21   NR HOV76282.1 2030809 g9554 i0 91.7 0.96 48 4 96 0 149 6 113 160 HOV76282.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 144 90.1 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
27141671 27141671 PRJNA557436_S_NODE_5182_length_182_cov_1.612245_g5134_i0 PRJNA557436 5182 182 1.612245 2.9342859 Candidatus Hydrogenedentes bacterium ADurb.Bin179 1852849 Bacteria Bacteria 110 4.77e-28   NR OQB32256.1 1852849 g5134 i0 94.1 0.840659340659341 51 3 84.1 0 29 181 175 225 OQB32256.1 MAG: hypothetical protein BWY09_02875 [Candidatus Hydrogenedentes bacterium ADurb.Bin179] diamond 153 110 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentes bacterium ADurb.Bin179
29005593 29005593 PRJNA557436_S_NODE_1388_length_312_cov_1.382671_g1340_i0 PRJNA557436 1388 312 1.382671 4.31393352 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 126 1.19e-34   NR HOV76282.1 2030809 g1340 i0 82.9 0.730769230769231 76 13 73.1 0 228 1 1 76 HOV76282.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 228 126 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
29289259 29289259 PRJNA557436_S_NODE_7409_length_161_cov_2.174603_g7361_i0 PRJNA557436 7409 161 2.174603 3.50111083 Candidatus Hydrogenedentes bacterium ADurb.Bin179 1852849 Bacteria Bacteria 95.5 8.789999999999999e-23   NR OQB30078.1 1852849 g7361 i0 100 0.987577639751553 53 0 98.8 0 161 3 134 186 OQB30078.1 MAG: hypothetical protein BWY09_03016 [Candidatus Hydrogenedentes bacterium ADurb.Bin179] diamond 159 95.5 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentes bacterium ADurb.Bin179
30458381 30458381 PRJNA557436_S_NODE_5453_length_179_cov_1.201389_g5405_i0 PRJNA557436 5453 179 1.201389 2.15048631 Candidatus Hydrogenedentes bacterium ADurb.Bin179 1852849 Bacteria Bacteria 115 5.739999999999999e-31   NR OQB31090.1 1852849 g5405 i0 91.5 0.988826815642458 59 5 98.9 0 179 3 40 98 OQB31090.1 MAG: hypothetical protein BWY09_02938 [Candidatus Hydrogenedentes bacterium ADurb.Bin179] diamond 177 115 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentes bacterium ADurb.Bin179
30963627 30963627 PRJNA557436_S_NODE_2494_length_240_cov_2.492683_g2446_i0 PRJNA557436 2494 240 2.492683 5.9824392 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 54.7 2.25e-6   NR HPO87531.1 2030809 g2446 i0 41.9 0.775 62 32 72.5 1 177 4 592 653 HPO87531.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 186 54.7 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
31247880 31247880 PRJNA557436_S_NODE_6675_length_167_cov_1.386364_g6627_i0 PRJNA557436 6675 167 1.386364 2.31522788 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 89.4 7.88e-21   NR HOV76282.1 2030809 g6627 i0 72.7 0.988023952095808 55 15 98.8 0 1 165 65 119 HOV76282.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 165 89.4 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;