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contig_metadata

15 rows where bioproject = "PRJNA557436" and tax_kingdom = "Thermoproteati"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 15 ✖

bioproject 1

  • PRJNA557436 · 15 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12014643 12014643 PRJNA557436_S_NODE_2930_length_225_cov_1.747368_g2882_i0 PRJNA557436 2930 225 1.747368 3.931578 Nitrosopumilaceae archaeon 2202732 Archaea Archaea 52.8 0.02   NTclustered gi|2893358431|emb|OZ220723.1| 2202732 g2882 i0 100 0.124444444444444 28 0 12 0 81 108 1811484 1811457 MAG: Nitrosopumilaceae archaeon isolate 679b85a9-901a-4549-bbbb-e934c43a20cf genome assembly, chromosome: 1 blastn 28 52.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae   Nitrosopumilaceae archaeon
26889214 26889214 PRJNA557436_S_NODE_701_length_425_cov_2.000000_g653_i0 PRJNA557436 701 425 2 8.5 Nitrososphaera sp. 1971748 Archaea Archaea 137 4.18e-36   NR MCI0556866.1 1971748 g653 i0 61.7 1.54588235294118 107 41 75.5 0 90 410 1 107 MCI0556866.1 hypothetical protein [Nitrososphaera sp.] diamond 657 137 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
26952086 26952086 PRJNA557436_S_NODE_1582_length_294_cov_2.532819_g1534_i0 PRJNA557436 1582 294 2.532819 7.44648786 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 84.3 1.14e-16   NR MBT7913600.1 2026714 g1534 i0 51.2 1.80612244897959 82 38 83.7 2 247 2 12 91 MBT7913600.1 hypothetical protein [Candidatus Bathyarchaeota archaeon] diamond 531 84.3 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
27205034 27205034 PRJNA557436_S_NODE_7782_length_159_cov_1.451613_g7734_i0 PRJNA557436 7782 159 1.451613 2.30806467 Nitrosopumilaceae archaeon 2202732 Archaea Archaea 54.3 2.39e-7   NR HWY36519.1 2202732 g7734 i0 64.1 0.735849056603774 39 14 73.6 0 42 158 4 42 HWY36519.1 hypothetical protein [Nitrosopumilaceae archaeon] diamond 117 54.3 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae   Nitrosopumilaceae archaeon
27521144 27521144 PRJNA557436_S_NODE_363_length_570_cov_2.742056_g322_i0 PRJNA557436 363 570 2.742056 15.6297192 Nitrososphaerota archaeon 2026795 Archaea Archaea 67 2.32e-10   NR MDE1813920.1 2026795 g322 i0 36.4 0.678947368421053 129 68 63.2 5 155 514 14 137 MDE1813920.1 hypothetical protein [Nitrososphaerota archaeon] diamond 387 67 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
28215581 28215581 PRJNA557436_S_NODE_2286_length_250_cov_2.632558_g2238_i0 PRJNA557436 2286 250 2.632558 6.581395 Nitrososphaera sp. 1971748 Archaea Archaea 107 1.11e-26   NR MCI0562694.1 1971748 g2238 i0 60.2 0.996 83 33 99.6 0 1 249 16 98 MCI0562694.1 hypothetical protein [Nitrososphaera sp.] diamond 249 107 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
29447016 29447016 PRJNA557436_S_NODE_7150_length_163_cov_1.687500_g7102_i0 PRJNA557436 7150 163 1.6875 2.750625 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 60.8 5.13e-9   NR HEY3527490.1 2169593 g7102 i0 52.5 1.12269938650307 61 22 99.4 1 162 1 260 320 HEY3527490.1 DNA methyltransferase [Nitrososphaeraceae archaeon] diamond 183 60.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
29857632 29857632 PRJNA557436_S_NODE_1651_length_289_cov_1.952756_g1603_i0 PRJNA557436 1651 289 1.952756 5.64346484 Nitrososphaerales archaeon 2268197 Archaea Archaea 47.4 2.55e-4   NR MEE8113276.1 2268197 g1603 i0 52.4 0.86159169550173 42 20 43.6 0 164 289 1 42 MEE8113276.1 hypothetical protein [Nitrososphaerales archaeon] diamond 249 47.4 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales     Nitrososphaerales archaeon
30521144 30521144 PRJNA557436_S_NODE_653_length_438_cov_2.454094_g605_i0 PRJNA557436 653 438 2.454094 10.74893172 Nitrososphaerales archaeon 2268197 Archaea Archaea 104 7.27e-24   NR MEM3097506.1 2268197 g605 i0 48.6 1.50684931506849 109 50 73.3 2 412 92 215 319 MEM3097506.1 RNA ligase (ATP) [Nitrososphaerales archaeon] diamond 660 104 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales     Nitrososphaerales archaeon
31469488 31469488 PRJNA557436_S_NODE_5336_length_180_cov_1.917241_g5288_i0 PRJNA557436 5336 180 1.917241 3.4510338 Saccharolobus sp. 2100761 Archaea Archaea 45.1 0.00119   NR MEM4884130.1 2100761 g5288 i0 35.2 4.35 54 35 90 0 172 11 94 147 MEM4884130.1 helix-turn-helix domain-containing protein [Saccharolobus sp.] diamond 783 45.1 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Saccharolobus Saccharolobus sp.
31627396 31627396 PRJNA557436_S_NODE_4336_length_194_cov_1.710692_g4288_i0 PRJNA557436 4336 194 1.710692 3.31874248 Nitrosopumilus sp. 2024843 Archaea Archaea 98.6 4.04e-22   NR MEK0324793.1 2024843 g4288 i0 71 0.958762886597938 62 18 95.9 0 1 186 421 482 MEK0324793.1 hypothetical protein [Nitrosopumilus sp.] diamond 186 98.6 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
31658907 31658907 PRJNA557436_S_NODE_5617_length_177_cov_1.190141_g5569_i0 PRJNA557436 5617 177 1.190141 2.10654957 Nitrosarchaeum sp. 2026886 Archaea Archaea 43.1 0.0014   NR MDO8640851.1 2026886 g5569 i0 41.7 0.813559322033898 48 27 79.7 1 17 157 12 59 MDO8640851.1 hypothetical protein [Nitrosarchaeum sp.] diamond 144 43.1 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosarchaeum Nitrosarchaeum sp.
32038756 32038756 PRJNA557436_S_NODE_3898_length_201_cov_2.475904_g3850_i0 PRJNA557436 3898 201 2.475904 4.97656704 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 50.1 2.15e-5   NR MBT7915248.1 2026714 g3850 i0 36.4 0.985074626865672 66 42 98.5 0 1 198 15 80 MBT7915248.1 hypothetical protein [Candidatus Bathyarchaeota archaeon] diamond 198 50.1 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
32133762 32133762 PRJNA557436_S_NODE_4578_length_190_cov_1.412903_g4530_i0 PRJNA557436 4578 190 1.412903 2.6845157 Nitrososphaerales archaeon 2268197 Archaea Archaea 66.6 5.03e-11   NR MFI5404910.1 2268197 g4530 i0 51.6 1.01052631578947 64 28 97.9 2 190 5 183 245 MFI5404910.1 hypothetical protein [Nitrososphaerales archaeon] diamond 192 66.6 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales     Nitrososphaerales archaeon
32228737 32228737 PRJNA557436_S_NODE_4638_length_189_cov_1.298701_g4590_i0 PRJNA557436 4638 189 1.298701 2.45454489 Nitrosarchaeum sp. 2026886 Archaea Archaea 107 3.64e-26   NR MBP0119264.1 2026886 g4590 i0 79 1.96825396825397 62 13 98.4 0 187 2 200 261 MBP0119264.1 hypothetical protein [Nitrosarchaeum sp.] diamond 372 107 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosarchaeum Nitrosarchaeum sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;