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contig_metadata

6 rows where bioproject = "PRJNA557436", tax_clade = "FCB group" and tax_phylum = "Candidatus Latescibacterota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 6 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 6 ✖

bioproject 1

  • PRJNA557436 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6913642 6913642 PRJNA557436_S_NODE_46_length_1650_cov_5.522601_g37_i0 PRJNA557436 46 1650 5.522601 91.1229165 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 110 9.93e-19   NTclustered gi|2891482399|emb|OZ220089.1| 2053570 g37 i0 92.208 0.538181818181818 77 6 5 0 1204 1280 4632244 4632168 MAG: Candidatus Latescibacterota bacterium isolate 4e2a754f-172e-45f6-b93c-83e01e84db49 genome assembly, chromosome: 1 blastn 888 110 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
27236839 27236839 PRJNA557436_S_NODE_7723_length_159_cov_2.209677_g7675_i0 PRJNA557436 7723 159 2.209677 3.51338643 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 110 2.38e-30   NR HQI77301.1 2053570 g7675 i0 96.2 1 53 2 100 0 159 1 11 63 HQI77301.1 hypothetical protein [Candidatus Latescibacterota bacterium] diamond 159 110 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
28689660 28689660 PRJNA557436_S_NODE_4467_length_192_cov_1.178344_g4419_i0 PRJNA557436 4467 192 1.178344 2.26242048 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 53.9 1.72e-6   NR HPU86653.1 2053570 g4419 i0 51.2 0.640625 41 20 64.1 0 123 1 165 205 HPU86653.1 site-specific DNA-methyltransferase [Candidatus Latescibacterota bacterium] diamond 123 53.9 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
29541827 29541827 PRJNA557436_S_NODE_3250_length_216_cov_1.546961_g3202_i0 PRJNA557436 3250 216 1.546961 3.34143576 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 53.9 2.89e-6   NR MCD6307405.1 2053570 g3202 i0 60 0.555555555555556 40 16 55.6 0 96 215 6 45 MCD6307405.1 hypothetical protein [Candidatus Latescibacterota bacterium] diamond 120 53.9 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
29573329 29573329 PRJNA557436_S_NODE_470_length_515_cov_2.339583_g424_i0 PRJNA557436 470 515 2.339583 12.04885245 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 142 8.92e-41   NR HQI77299.1 2053570 g424 i0 100 0.390291262135922 67 0 39 0 507 307 6 72 HQI77299.1 hypothetical protein [Candidatus Latescibacterota bacterium] diamond 201 142 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
29984087 29984087 PRJNA557436_S_NODE_1991_length_265_cov_1.939130_g1943_i0 PRJNA557436 1991 265 1.93913 5.1386945 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 164 1.2e-50   NR HQI77302.1 2053570 g1943 i0 93.1 0.984905660377358 87 6 98.5 0 264 4 23 109 HQI77302.1 hypothetical protein [Candidatus Latescibacterota bacterium] diamond 261 164 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;