RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

12 rows where bioproject = "PRJNA557436", tax_clade = "Cyanobacteriota/Melainabacteria group" and tax_phylum = "Candidatus Melainabacteria"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 12 ✖

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 12 ✖

bioproject 1

  • PRJNA557436 · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23488101 23488101 PRJNA557436_S_NODE_4119_length_197_cov_2.833333_g4071_i0 PRJNA557436 4119 197 2.833333 5.58166601 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 265 2.0099999999999997e-66   NTclustered gi|1958007833|gb|CP064963.1| 2052166 g4071 i0 90.863 116.934010152284 197 18 100 0 1 197 3681655 3681851 MAG: Candidatus Melainabacteria bacterium isolate Aved_18-Q3-R54-62_BATAC.358_cln chromosome, complete genome blastn 23036 265 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
28310655 28310655 PRJNA557436_S_NODE_5846_length_174_cov_1.899281_g5798_i0 PRJNA557436 5846 174 1.899281 3.30474894 Candidatus Obscuribacter sp. 2711154 Bacteria Bacteria 120 6.0099999999999994e-30   NR MBK7841898.1 2711154 g5798 i0 98.2 0.982758620689655 57 1 98.3 0 173 3 150 206 MBK7841898.1 hypothetical protein [Candidatus Obscuribacter sp.] diamond 171 120 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales Candidatus Obscuribacteraceae Candidatus Obscuribacter Candidatus Obscuribacter sp.
28563246 28563246 PRJNA557436_S_NODE_5867_length_174_cov_1.561151_g5819_i0 PRJNA557436 5867 174 1.561151 2.71640274 Candidatus Obscuribacter sp. 2711154 Bacteria Bacteria 112 4.4199999999999995e-30   NR MBK7841901.1 2711154 g5819 i0 100 1 58 0 100 0 1 174 26 83 MBK7841901.1 hypothetical protein [Candidatus Obscuribacter sp.] diamond 174 112 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales Candidatus Obscuribacteraceae Candidatus Obscuribacter Candidatus Obscuribacter sp.
29068484 29068484 PRJNA557436_S_NODE_5028_length_184_cov_1.590604_g4980_i0 PRJNA557436 5028 184 1.590604 2.92671136 Vampirovibrionales bacterium 2692181 Bacteria Bacteria 89.4 1.84e-20   NR MBK8191433.1 2692181 g4980 i0 65.6 1.98913043478261 61 21 99.5 0 183 1 103 163 MBK8191433.1 endonuclease VII domain-containing protein [Vampirovibrionales bacterium] diamond 366 89.4 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria Vampirovibriophyceae Vampirovibrionales     Vampirovibrionales bacterium
29699403 29699403 PRJNA557436_S_NODE_7930_length_158_cov_1.447154_g7882_i0 PRJNA557436 7930 158 1.447154 2.28650332 Candidatus Obscuribacter sp. 2711154 Bacteria Bacteria 103 5.529999999999999e-24   NR MBK7841898.1 2711154 g7882 i0 100 0.987341772151899 52 0 98.7 0 2 157 431 482 MBK7841898.1 hypothetical protein [Candidatus Obscuribacter sp.] diamond 156 103 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales Candidatus Obscuribacteraceae Candidatus Obscuribacter Candidatus Obscuribacter sp.
29857630 29857630 PRJNA557436_S_NODE_1171_length_337_cov_2.132450_g1123_i0 PRJNA557436 1171 337 2.13245 7.1863565 Candidatus Obscuribacter sp. 2711154 Bacteria Bacteria 67 3.44e-10   NR MBK7842060.1 2711154 g1123 i0 65.4 0.979228486646884 52 18 46.3 0 291 136 15 66 MBK7842060.1 hypothetical protein [Candidatus Obscuribacter sp.] diamond 330 67 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales Candidatus Obscuribacteraceae Candidatus Obscuribacter Candidatus Obscuribacter sp.
29921038 29921038 PRJNA557436_S_NODE_1931_length_269_cov_1.722222_g1883_i0 PRJNA557436 1931 269 1.722222 4.63277718 Candidatus Obscuribacter sp. 2711154 Bacteria Bacteria 155 8.049999999999999e-46   NR MBK7841900.1 2711154 g1883 i0 95.5 0.992565055762082 89 4 99.3 0 267 1 40 128 MBK7841900.1 hypothetical protein [Candidatus Obscuribacter sp.] diamond 267 155 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales Candidatus Obscuribacteraceae Candidatus Obscuribacter Candidatus Obscuribacter sp.
30124312 30124312 PRJNA557436_S_NODE_8132_length_157_cov_1.188525_g8084_i0 PRJNA557436 8132 157 1.188525 1.86598425 Candidatus Obscuribacter 1906156 Bacteria Bacteria 114 6.57e-28   NR MBX3137679.1 2364082 g8084 i0 100 2.98089171974522 52 0 99.4 0 2 157 216 267 MBX3137679.1 hypothetical protein [Candidatus Obscuribacterales bacterium] diamond 468 114 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
31374560 31374560 PRJNA557436_S_NODE_6916_length_165_cov_1.407692_g6868_i0 PRJNA557436 6916 165 1.407692 2.3226918 Candidatus Obscuribacter sp. 2711154 Bacteria Bacteria 116 9.33e-29   NR MBK7841898.1 2711154 g6868 i0 100 0.963636363636364 53 0 96.4 0 163 5 274 326 MBK7841898.1 hypothetical protein [Candidatus Obscuribacter sp.] diamond 159 116 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales Candidatus Obscuribacteraceae Candidatus Obscuribacter Candidatus Obscuribacter sp.
32007101 32007101 PRJNA557436_S_NODE_6818_length_166_cov_1.160305_g6770_i0 PRJNA557436 6818 166 1.160305 1.9261063 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 72.8 7.88e-14   NR MFA6213521.1 2364082 g6770 i0 58.2 0.993975903614458 55 23 99.4 0 2 166 99 153 MFA6213521.1 hypothetical protein [Candidatus Obscuribacterales bacterium] diamond 165 72.8 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
32734143 32734143 PRJNA557436_S_NODE_9260_length_151_cov_2.077586_g9212_i0 PRJNA557436 9260 151 2.077586 3.13715486 Candidatus Obscuribacter sp. 2711154 Bacteria Bacteria 88.6 7.890000000000001e-21   NR MBK7841899.1 2711154 g9212 i0 94 0.993377483443709 50 3 99.3 0 150 1 78 127 MBK7841899.1 hypothetical protein [Candidatus Obscuribacter sp.] diamond 150 88.6 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales Candidatus Obscuribacteraceae Candidatus Obscuribacter Candidatus Obscuribacter sp.
32859926 32859926 PRJNA557436_S_NODE_8240_length_156_cov_1.636364_g8192_i0 PRJNA557436 8240 156 1.636364 2.55272784 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 66.2 2.04e-11   NR MFA6213521.1 2364082 g8192 i0 68.6 0.980769230769231 51 16 98.1 0 3 155 5 55 MFA6213521.1 hypothetical protein [Candidatus Obscuribacterales bacterium] diamond 153 66.2 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;