RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

12 rows where bioproject = "PRJNA557436" and tax_clade = "Candidatus Pacearchaeota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • Candidatus Pacearchaeota · 12 ✖

bioproject 1

  • PRJNA557436 · 12 ✖

analysis 1

tax_phylum 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27868382 27868382 PRJNA557436_S_NODE_3105_length_220_cov_2.400000_g3057_i0 PRJNA557436 3105 220 2.4 5.28 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 47 9.11e-4   NR MBS3066591.1 2026773 g3057 i0 39.6 0.722727272727273 53 32 72.3 0 160 2 931 983 MBS3066591.1 ribonuclease H-like domain-containing protein [Candidatus Pacearchaeota archaeon] diamond 159 47 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
28089466 28089466 PRJNA557436_S_NODE_9185_length_152_cov_1.068376_g9137_i0 PRJNA557436 9185 152 1.068376 1.62393152 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 64.7 3.32e-12   NR MCK9568580.1 2026773 g9137 i0 61.5 0.769736842105263 39 15 77 0 150 34 28 66 MCK9568580.1 hypothetical protein [Candidatus Pacearchaeota archaeon] diamond 117 64.7 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
28121110 28121110 PRJNA557436_S_NODE_5805_length_175_cov_1.142857_g5757_i0 PRJNA557436 5805 175 1.142857 1.99999975 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 70.1 2.21e-13   NR MAH50418.1 2026773 g5757 i0 60.3 0.994285714285714 58 23 99.4 0 175 2 37 94 MAH50418.1 hypothetical protein [Candidatus Pacearchaeota archaeon] diamond 174 70.1 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
28973758 28973758 PRJNA557436_S_NODE_8508_length_155_cov_1.058333_g8460_i0 PRJNA557436 8508 155 1.058333 1.64041615 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 69.3 3.26e-12   NR MCK5604707.1 2026773 g8460 i0 77.1 0.929032258064516 48 11 92.9 0 1 144 101 148 MCK5604707.1 DUF5309 domain-containing protein [Candidatus Pacearchaeota archaeon] diamond 144 69.3 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
29320837 29320837 PRJNA557436_S_NODE_1009_length_359_cov_1.462963_g961_i0 PRJNA557436 1009 359 1.462963 5.25203717 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 112 2.46e-27   NR MAG25533.1 2026773 g961 i0 51.4 0.877437325905292 105 50 86.9 1 317 6 73 177 MAG25533.1 hypothetical protein [Candidatus Pacearchaeota archaeon] diamond 315 112 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
29415519 29415519 PRJNA557436_S_NODE_3769_length_204_cov_1.928994_g3721_i0 PRJNA557436 3769 204 1.928994 3.93514776 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 46.6 9.27e-4   NR MAG25533.1 2026773 g3721 i0 38.7 0.911764705882353 62 36 91.2 1 3 188 3 62 MAG25533.1 hypothetical protein [Candidatus Pacearchaeota archaeon] diamond 186 46.6 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
29573328 29573328 PRJNA557436_S_NODE_4570_length_190_cov_1.574194_g4522_i0 PRJNA557436 4570 190 1.574194 2.9909686 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 91.7 8.1800000000000005e-22   NR MCK5605839.1 2026773 g4522 i0 65.6 0.963157894736842 61 21 96.3 0 190 8 5 65 MCK5605839.1 hypothetical protein [Candidatus Pacearchaeota archaeon] diamond 183 91.7 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
29952469 29952469 PRJNA557436_S_NODE_4731_length_187_cov_2.381579_g4683_i0 PRJNA557436 4731 187 2.381579 4.45355273 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 63.2 1.11e-9   NR MCK5601933.1 2026773 g4683 i0 46.8 0.994652406417112 62 33 99.5 0 1 186 266 327 MCK5601933.1 hypothetical protein [Candidatus Pacearchaeota archaeon] diamond 186 63.2 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
30173549 30173549 PRJNA557436_S_NODE_9012_length_152_cov_2.290598_g8964_i0 PRJNA557436 9012 152 2.290598 3.48170896 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 48.9 7.14e-5   NR MCK5606892.1 2026773 g8964 i0 45.1 1.00657894736842 51 27 98.7 1 2 151 643 693 MCK5606892.1 hypothetical protein [Candidatus Pacearchaeota archaeon] diamond 153 48.9 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
32038755 32038755 PRJNA557436_S_NODE_338_length_598_cov_2.813499_g298_i0 PRJNA557436 338 598 2.813499 16.82472402 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 52.4 3.34e-4   NR MAG26708.1 2026773 g298 i0 34.3 0.496655518394649 99 53 49.7 1 126 422 8 94 MAG26708.1 hypothetical protein [Candidatus Pacearchaeota archaeon] diamond 297 52.4 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
32386761 32386761 PRJNA557436_S_NODE_3199_length_217_cov_2.637363_g3151_i0 PRJNA557436 3199 217 2.637363 5.72307771 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 67.8 4.01e-11   NR MCK5606892.1 2026773 g3151 i0 44.4 0.995391705069124 72 38 98.2 2 213 1 687 757 MCK5606892.1 hypothetical protein [Candidatus Pacearchaeota archaeon] diamond 216 67.8 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
32670899 32670899 PRJNA557436_S_NODE_8740_length_154_cov_1.008403_g8692_i0 PRJNA557436 8740 154 1.008403 1.55294062 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 51.6 4.26e-7   NR MCK5607935.1 2026773 g8692 i0 57.9 1.48051948051948 38 16 74 0 36 149 12 49 MCK5607935.1 hypothetical protein [Candidatus Pacearchaeota archaeon] diamond 228 51.6 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;