RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA557436", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Uhriibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Uhriibacteriota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA557436 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29952476 29952476 PRJNA557436_S_NODE_7531_length_161_cov_0.952381_g7483_i0 PRJNA557436 7531 161 0.952381 1.53333341 Candidatus Uhrbacteria bacterium 2053634 Bacteria Bacteria 107 2.92e-28   NR MDP3794198.1 2053634 g7483 i0 88.5 0.968944099378882 52 6 96.9 0 5 160 1 52 MDP3794198.1 DNA N-6-adenine-methyltransferase [Candidatus Uhrbacteria bacterium] diamond 156 107 1 Bacteria Bacteria candidate phyla   Candidatus Uhriibacteriota         Candidatus Uhrbacteria bacterium
31089890 31089890 PRJNA557436_S_NODE_75_length_1181_cov_5.109075_g61_i0 PRJNA557436 75 1181 5.109075 60.33817575 Candidatus Uhrbacteria bacterium 2053634 Bacteria Bacteria 110 1.37e-25   NR MBI4434955.1 2053634 g61 i0 57.4 0.469940728196444 94 35 22.6 2 271 537 1 94 MBI4434955.1 hypothetical protein [Candidatus Uhrbacteria bacterium] diamond 555 110 1 Bacteria Bacteria candidate phyla   Candidatus Uhriibacteriota         Candidatus Uhrbacteria bacterium
31247864 31247864 PRJNA557436_S_NODE_1595_length_293_cov_2.736434_g1547_i0 PRJNA557436 1595 293 2.736434 8.01775162 Candidatus Uhrbacteria bacterium 2053634 Bacteria Bacteria 76.3 1.18e-13   NR MBI5134814.1 2053634 g1547 i0 79.6 0.501706484641638 49 10 50.2 0 1 147 666 714 MBI5134814.1 hypothetical protein [Candidatus Uhrbacteria bacterium] diamond 147 76.3 1 Bacteria Bacteria candidate phyla   Candidatus Uhriibacteriota         Candidatus Uhrbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;