RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA557436", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Rokuibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Rokuibacteriota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA557436 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26762251 26762251 PRJNA557436_S_NODE_4601_length_189_cov_2.941558_g4553_i0 PRJNA557436 4601 189 2.941558 5.55954462 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 92.4 2.16e-20   NR PYM88130.1 2053607 g4553 i0 79.2 1.74603174603175 53 11 84.1 0 179 21 171 223 PYM88130.1 MAG: polysaccharide biosynthesis protein [Candidatus Rokuibacteriota bacterium] diamond 330 92.4 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
28405314 28405314 PRJNA557436_S_NODE_3846_length_202_cov_2.826347_g3798_i0 PRJNA557436 3846 202 2.826347 5.70922094 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 102 3.4299999999999995e-24   NR HAM54580.1 2053607 g3798 i0 71.2 1.91584158415842 66 19 98 0 200 3 122 187 HAM54580.1 hypothetical protein [Candidatus Rokuibacteriota bacterium] diamond 387 102 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
30047066 30047066 PRJNA557436_S_NODE_9011_length_152_cov_2.307692_g8963_i0 PRJNA557436 9011 152 2.307692 3.50769184 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 75.5 9.23e-15   NR HAM55009.1 2053607 g8963 i0 72.9 0.947368421052632 48 13 94.7 0 149 6 136 183 HAM55009.1 hypothetical protein [Candidatus Rokuibacteriota bacterium] diamond 144 75.5 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
31880330 31880330 PRJNA557436_S_NODE_8857_length_153_cov_1.500000_g8809_i0 PRJNA557436 8857 153 1.5 2.295 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 48.5 9.73e-5   NR HAM53865.1 2053607 g8809 i0 61.3 0.607843137254902 31 12 60.8 0 136 44 517 547 HAM53865.1 hypothetical protein [Candidatus Rokuibacteriota bacterium] diamond 93 48.5 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;