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contig_metadata

2 rows where bioproject = "PRJNA556992" and tax_phylum = "candidate division WWE3"

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tax_superkingdom 1

tax_phylum 1

  • candidate division WWE3 · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA556992 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28640569 28640569 PRJNA556992_P_NODE_955887_length_235_cov_2.777778_g953697_i0 PRJNA556992 955887 235 2.777778 6.5277783 Bacteria 2 Bacteria Bacteria 74.3 2.23e-13   NR OGC50104.1 1802616 g953697 i0 54.5 1.94042553191489 77 35 98.3 0 1 231 256 332 OGC50104.1 MAG: tyrosine--tRNA ligase [candidate division WWE3 bacterium RIFCSPHIGHO2_01_FULL_40_23] diamond 456 74.7 0.994645247657296 Bacteria Bacteria candidate phyla   candidate division WWE3         candidate division WWE3 bacterium RIFCSPHIGHO2_01_FULL_40_23
28783558 28783558 PRJNA556992_P_NODE_211387_length_321_cov_1.895161_g209199_i0 PRJNA556992 211387 321 1.895161 6.08346681 candidate division WWE3 bacterium RIFCSPLOWO2_ 2053526 Bacteria Bacteria 43.5 0.0455   NR OGC53787.1 1802623 g209199 i0 48.5 0.308411214953271 33 17 30.8 0 11 109 325 357 OGC53787.1 MAG: hypothetical protein A3B64_00455 [candidate division WWE3 bacterium RIFCSPLOWO2_01_FULL_37_24] diamond 99 43.5 1 Bacteria Bacteria candidate phyla   candidate division WWE3         candidate division WWE3 bacterium RIFCSPLOWO2_01_FULL_37_24

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;