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contig_metadata

22 rows where bioproject = "PRJNA556992", tax_phylum = "Thermoplasmatota" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 22 ✖

tax_phylum 1

  • Thermoplasmatota · 22 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA556992 · 22 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4955859 4955859 PRJNA556992_P_NODE_870744_length_242_cov_2.254438_g868554_i0 PRJNA556992 870744 242 2.254438 5.45573996 Candidatus Aciduliprofundum 379546 Archaea Archaea 165 2.68e-36   NTclustered gi|470485990|ref|NR_076728.1| 379547 g868554 i0 82.143 27.8801652892562 196 32 80 3 25 218 2441 2247 Aciduliprofundum boonei strain T469 23S ribosomal RNA gene, complete sequence blastn 6747 165 1 Archaea DHVE2 group Methanobacteriati Thermoplasmatota       Candidatus Aciduliprofundum Candidatus Aciduliprofundum boonei
12007841 12007841 PRJNA556992_P_NODE_456030_length_271_cov_2.010101_g453841_i0 PRJNA556992 456030 271 2.010101 5.44737371 Thermoplasmata archaeon 1906666 Archaea Archaea 99.4 5.120000000000001e-22   NR HTW77379.1 1906666 g453841 i0 63.9 2.53505535055351 72 26 79.7 0 23 238 410 481 HTW77379.1 ATP-binding protein [Thermoplasmata archaeon] diamond 687 99.4 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
12009350 12009350 PRJNA556992_P_NODE_578030_length_260_cov_5.342246_g575841_i0 PRJNA556992 578030 260 5.342246 13.8898396 Archaea 2157 Archaea Archaea 132 7.8e-34   NR PNX49270.1 1933281 g575841 i0 75.3 12.8423076923077 85 21 98.1 0 2 256 516 600 PNX49270.1 MAG: hypothetical protein BV459_00350 [Thermoplasmata archaeon M11B2D] diamond 3339 133 0.992481203007519 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon M11B2D
12604313 12604313 PRJNA556992_P_NODE_203630_length_325_cov_2.400794_g201442_i0 PRJNA556992 203630 325 2.400794 7.8025805 Candidatus Methanogranum 1577789 Archaea Archaea 586 6.769999999999998e-163   NTclustered gi|2621784480|emb|OY780938.1| 2093355 g201442 i0 99.381 18.6584615384615 323 2 99 0 3 325 1493103 1492781 MAG: uncultured Candidatus Methanogranum sp. isolate 9d90576e-3f35-4afd-8682-ecdb60e67c32 genome assembly, chromosome: 1 blastn 6064 586 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomassiliicoccaceae Candidatus Methanogranum uncultured Candidatus Methanogranum sp.
18376639 18376639 PRJNA556992_P_NODE_170175_length_344_cov_4.564576_g167987_i0 PRJNA556992 170175 344 4.564576 15.70214144 uncultured Candidatus Methanogranum sp. 2093355 Archaea Archaea 630 3.289999999999999e-176   NTclustered gi|2621784480|emb|OY780938.1| 2093355 g167987 i0 99.709 15.7441860465116 344 1 100 0 1 344 1494729 1494386 MAG: uncultured Candidatus Methanogranum sp. isolate 9d90576e-3f35-4afd-8682-ecdb60e67c32 genome assembly, chromosome: 1 blastn 5416 630 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomassiliicoccaceae Candidatus Methanogranum uncultured Candidatus Methanogranum sp.
18376879 18376879 PRJNA556992_P_NODE_184175_length_336_cov_1.984791_g181987_i0 PRJNA556992 184175 336 1.984791 6.66889776 uncultured Candidatus Methanogranum sp. 2093355 Archaea Archaea 621 1.9299999999999997e-173   NTclustered gi|2621784480|emb|OY780938.1| 2093355 g181987 i0 100 193.119047619048 336 0 100 0 1 336 1493782 1493447 MAG: uncultured Candidatus Methanogranum sp. isolate 9d90576e-3f35-4afd-8682-ecdb60e67c32 genome assembly, chromosome: 1 blastn 64888 621 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomassiliicoccaceae Candidatus Methanogranum uncultured Candidatus Methanogranum sp.
18383233 18383233 PRJNA556992_P_NODE_650075_length_255_cov_1.489011_g647886_i0 PRJNA556992 650075 255 1.489011 3.79697805 Cuniculiplasma divulgatum 1673428 Archaea Archaea 52.8 0.023   NTclustered gi|2573965583|gb|CP133595.1| 1673428 g647886 i0 100 0.109803921568627 28 0 11 0 148 175 1831325 1831298 MAG: Cuniculiplasma divulgatum isolate BR_06 chromosome, complete genome blastn 28 52.8 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales Cuniculiplasmataceae Cuniculiplasma Cuniculiplasma divulgatum
20931964 20931964 PRJNA556992_P_NODE_536337_length_264_cov_2.000000_g534148_i0 PRJNA556992 536337 264 2 5.28 uncultured Candidatus Methanogranum sp. 2093355 Archaea Archaea 483 7.219999999999998e-132   NTclustered gi|2621784480|emb|OY780938.1| 2093355 g534148 i0 99.621 133.128787878788 264 1 100 0 1 264 1495099 1494836 MAG: uncultured Candidatus Methanogranum sp. isolate 9d90576e-3f35-4afd-8682-ecdb60e67c32 genome assembly, chromosome: 1 blastn 35146 483 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomassiliicoccaceae Candidatus Methanogranum uncultured Candidatus Methanogranum sp.
27395022 27395022 PRJNA556992_P_NODE_901583_length_240_cov_6.916168_g899393_i0 PRJNA556992 901583 240 6.916168 16.5988032 Candidatus Poseidoniaceae archaeon 2666346 Archaea Archaea 65.1 4.93e-10   NR MCP2504817.1 2666346 g899393 i0 42.7 1.025 82 42 96.3 2 240 10 50 131 MCP2504817.1 putative Ig domain-containing protein [Candidatus Poseidoniaceae archaeon] diamond 246 65.1 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Poseidoniaceae   Candidatus Poseidoniaceae archaeon
27742337 27742337 PRJNA556992_P_NODE_647804_length_255_cov_1.923077_g645615_i0 PRJNA556992 647804 255 1.923077 4.90384635 Methanomassiliicoccales archaeon 1906667 Archaea Archaea 55.5 1.25e-6   NR TET91504.1 1906667 g645615 i0 37.7 2.54117647058824 69 43 81.2 0 214 8 162 230 TET91504.1 MAG: hypothetical protein E3J35_01975 [Methanomassiliicoccales archaeon] diamond 648 55.5 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales     Methanomassiliicoccales archaeon
27963053 27963053 PRJNA556992_P_NODE_708165_length_251_cov_0.865169_g705976_i0 PRJNA556992 708165 251 0.865169 2.17157419 Thermoplasmata archaeon 1906666 Archaea Archaea 79 7.04e-15   NR UCG69291.1 1906666 g705976 i0 52.1 12.8844621513944 73 32 87.3 1 31 249 48 117 UCG69291.1 MAG: DeoR family transcriptional regulator [Thermoplasmata archaeon] diamond 3234 79 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
28183760 28183760 PRJNA556992_P_NODE_518406_length_265_cov_4.687500_g516217_i0 PRJNA556992 518406 265 4.6875 12.421875 Thermoplasmatota archaeon 2806419 Archaea Archaea 128 9.9e-33   NR HET6399043.1 2806419 g516217 i0 77 0.984905660377358 87 20 98.5 0 4 264 49 135 HET6399043.1 aspartate kinase [Thermoplasmatota archaeon] diamond 261 128 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
28278670 28278670 PRJNA556992_P_NODE_855566_length_243_cov_1.476471_g853376_i0 PRJNA556992 855566 243 1.476471 3.58782453 Thermoplasmata archaeon 1906666 Archaea Archaea 59.3 1.55e-8   NR MEM3038639.1 1906666 g853376 i0 44.9 0.962962962962963 78 43 96.3 0 7 240 72 149 MEM3038639.1 hypothetical protein [Thermoplasmata archaeon] diamond 234 59.3 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
28499737 28499737 PRJNA556992_P_NODE_278287_length_293_cov_4.486364_g276098_i0 PRJNA556992 278287 293 4.486364 13.14504652 Candidatus Thalassarchaeaceae archaeon 2670411 Archaea Archaea 52.8 4.9099999999999996e-06   NR MFL2965254.1 2670411 g276098 i0 32.3 0.982935153583618 96 62 96.2 2 5 286 26 120 MFL2965254.1 glycine-rich domain-containing protein-like [Candidatus Thalassarchaeaceae archaeon] diamond 288 52.8 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Thalassarchaeaceae   Candidatus Thalassarchaeaceae archaeon
28531628 28531628 PRJNA556992_P_NODE_870047_length_242_cov_2.378698_g867857_i0 PRJNA556992 870047 242 2.378698 5.75644916 Thermoplasmata archaeon 1906666 Archaea Archaea 60.1 1.05e-8   NR MCI4342434.1 1906666 g867857 i0 56.5 1.1404958677686 46 19 55.8 1 108 242 1 46 MCI4342434.1 recombinase family protein [Thermoplasmata archaeon] diamond 276 60.1 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
29051000 29051000 PRJNA556992_P_NODE_839268_length_244_cov_0.900585_g837078_i0 PRJNA556992 839268 244 0.900585 2.1974274 root 1 Root_unresolved Root_unresolved 45.4 0.004   NR EQB69978.1 261388 g837078 i0 35 4.54918032786885 80 48 94.7 2 4 234 3 81 EQB69978.1 MAG: hypothetical protein AMDU4_FER2C00283G0001 [Ferroplasma sp. Type II] diamond 1110 45.4 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales Ferroplasmaceae Ferroplasma Ferroplasma sp. Type II
31215505 31215505 PRJNA556992_P_NODE_358995_length_281_cov_1.658654_g356806_i0 PRJNA556992 358995 281 1.658654 4.66081774 Thermoplasmatota archaeon 2806419 Archaea Archaea 166 3.1e-47   NR HVM44612.1 2806419 g356806 i0 84.9 2.95729537366548 93 14 99.3 0 1 279 2 94 HVM44612.1 FAD-dependent oxidoreductase [Thermoplasmatota archaeon] diamond 831 166 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
31595736 31595736 PRJNA556992_P_NODE_396936_length_277_cov_1.411765_g394747_i0 PRJNA556992 396936 277 1.411765 3.91058905 Thermoplasmata archaeon M8B2D 1933278 Archaea Archaea 42 0.0153   NR PNX48829.1 1933278 g394747 i0 46.3 0.444043321299639 41 22 44.4 0 26 148 29 69 PNX48829.1 MAG: hypothetical protein BV456_09415 [Thermoplasmata archaeon M8B2D] diamond 123 42 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon M8B2D
31880223 31880223 PRJNA556992_P_NODE_846197_length_243_cov_3.864706_g844007_i0 PRJNA556992 846197 243 3.864706 9.39123558 Thermoplasmata archaeon 1906666 Archaea Archaea 65.5 3.64e-10   NR NIT77362.1 1906666 g844007 i0 40.7 1 81 47 98.8 1 242 3 939 1019 NIT77362.1 hypothetical protein [Thermoplasmata archaeon] diamond 243 65.5 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
31911587 31911587 PRJNA556992_P_NODE_1028117_length_227_cov_5.642857_g1025927_i0 PRJNA556992 1028117 227 5.642857 12.80928539 Thermoplasmata archaeon 1906666 Archaea Archaea 54.7 1.78e-6   NR MCK5559226.1 1906666 g1025927 i0 40 2.35242290748899 60 36 79.3 0 185 6 166 225 MCK5559226.1 hypothetical protein [Thermoplasmata archaeon] diamond 534 54.7 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
32544852 32544852 PRJNA556992_P_NODE_376239_length_279_cov_1.859223_g374050_i0 PRJNA556992 376239 279 1.859223 5.18723217 Thermoplasmatota archaeon 2806419 Archaea Archaea 90.5 7.73e-19   NR MFA5943095.1 2806419 g374050 i0 51.1 5.78494623655914 88 42 94.6 1 7 270 157 243 MFA5943095.1 MBL fold metallo-hydrolase [Thermoplasmatota archaeon] diamond 1614 90.5 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
32607767 32607767 PRJNA556992_P_NODE_517960_length_265_cov_5.645833_g515771_i0 PRJNA556992 517960 265 5.645833 14.96145745 Thermoplasmatota archaeon 2806419 Archaea Archaea 51.2 5.03e-5   NR HUR62530.1 2806419 g515771 i0 49.4 0.939622641509434 83 34 84.9 5 226 2 422 504 HUR62530.1 MFS transporter [Thermoplasmatota archaeon] diamond 249 51.2 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;