contig_metadata
218 rows where bioproject = "PRJNA556992" and tax_phylum = "Nitrospirota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 528269 | 528269 | PRJNA556992_P_NODE_403401_length_276_cov_2.152709_g401212_i0 | PRJNA556992 | 403401 | 276 | 2.152709 | 5.94147684 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 261 | 3.87e-65 | NTclustered | gi|2194428397|gb|CP092079.1| | 70125 | g401212 | i0 | 83.883 | 0.989130434782609 | 273 | 44 | 99 | 0 | 1 | 273 | 2130589 | 2130861 | MAG: Nitrospira sp. isolate UBC3 chromosome | blastn | 273 | 261 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 1798171 | 1798171 | PRJNA556992_P_NODE_1061542_length_222_cov_4.335570_g1059352_i0 | PRJNA556992 | 1061542 | 222 | 4.33557 | 9.6249654 | Candidatus Nitrospira kreftii | 2652173 | Bacteria | Bacteria | 222 | 1.42e-53 | NTclustered | gi|1884724763|gb|CP047423.1| | 2652173 | g1059352 | i0 | 86.765 | 11.3828828828829 | 204 | 21 | 91 | 5 | 21 | 221 | 1001866 | 1001666 | Candidatus Nitrospira kreftii isolate comreactor17 chromosome, complete genome | blastn | 2527 | 222 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Candidatus Nitrospira kreftii | ||
| 1800067 | 1800067 | PRJNA556992_P_NODE_139302_length_366_cov_3.010239_g137114_i0 | PRJNA556992 | 139302 | 366 | 3.010239 | 11.01747474 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 62.1 | 5.77e-5 | NTclustered | gi|2108317525|gb|CP070669.1| | 2026887 | g137114 | i0 | 97.222 | 0.0983606557377049 | 36 | 1 | 10 | 0 | 1 | 36 | 2262712 | 2262677 | MAG: Nitrospirae bacterium isolate bin746 chromosome | blastn | 36 | 62.1 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 1808704 | 1808704 | PRJNA556992_P_NODE_789962_length_246_cov_3.294798_g787772_i0 | PRJNA556992 | 789962 | 246 | 3.294798 | 8.10520308 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 193 | 1.25e-44 | NTclustered | gi|2863125063|dbj|AP038805.1| | 70125 | g787772 | i0 | 84.536 | 1.54471544715447 | 194 | 30 | 79 | 0 | 53 | 246 | 4112884 | 4113077 | MAG: Nitrospira sp. AFB01 DNA, complete genome | blastn | 380 | 193 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 1809071 | 1809071 | PRJNA556992_P_NODE_819022_length_245_cov_0.895349_g816832_i0 | PRJNA556992 | 819022 | 245 | 0.895349 | 2.19360505 | Nitrospira sp. KM1 | 1936990 | Bacteria | Bacteria | 448 | 2.41e-121 | NTclustered | gi|1808878785|dbj|AP022671.1| | 1936990 | g816832 | i0 | 99.592 | 1 | 245 | 1 | 100 | 0 | 1 | 245 | 2471162 | 2471406 | Nitrospira sp. KM1 DNA, complete genome | blastn | 245 | 448 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. KM1 | ||
| 3078515 | 3078515 | PRJNA556992_P_NODE_353403_length_282_cov_1.143541_g351214_i0 | PRJNA556992 | 353403 | 282 | 1.143541 | 3.22478562 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 93.6 | 8.08e-20 | NR | WP_041774011.1 | 180 | g351214 | i0 | 49.5 | 3.96808510638298 | 93 | 47 | 98.9 | 0 | 4 | 282 | 475 | 567 | WP_041774011.1 sensor domain-containing diguanylate cyclase [Leptospirillum ferrooxidans] | diamond | 1119 | 94 | 0.995744680851064 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Leptospirillum | Leptospirillum ferrooxidans | ||
| 3079303 | 3079303 | PRJNA556992_P_NODE_410003_length_275_cov_4.341584_g407814_i0 | PRJNA556992 | 410003 | 275 | 4.341584 | 11.939356 | Nitrospira sp. KM1 | 1936990 | Bacteria | Bacteria | 492 | 1.26e-134 | NTclustered | gi|1808878785|dbj|AP022671.1| | 1936990 | g407814 | i0 | 98.909 | 50.9927272727273 | 275 | 3 | 100 | 0 | 1 | 275 | 4207873 | 4207599 | Nitrospira sp. KM1 DNA, complete genome | blastn | 14023 | 492 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. KM1 | ||
| 3081848 | 3081848 | PRJNA556992_P_NODE_615343_length_257_cov_5.184783_g613154_i0 | PRJNA556992 | 615343 | 257 | 5.184783 | 13.32489231 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 130 | 1.05e-25 | NTclustered | gi|2863129529|dbj|AP038806.1| | 70125 | g613154 | i0 | 94.186 | 29.7315175097276 | 86 | 4 | 33 | 1 | 119 | 203 | 1132210 | 1132295 | MAG: Nitrospira sp. NFB02 DNA, complete genome | blastn | 7641 | 130 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 3083395 | 3083395 | PRJNA556992_P_NODE_738343_length_249_cov_1.744318_g736154_i0 | PRJNA556992 | 738343 | 249 | 1.744318 | 4.34335182 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 237 | 5.8e-58 | NTclustered | gi|2863129529|dbj|AP038806.1| | 70125 | g736154 | i0 | 84.585 | 1.01606425702811 | 253 | 24 | 100 | 10 | 1 | 249 | 1724107 | 1723866 | MAG: Nitrospira sp. NFB02 DNA, complete genome | blastn | 253 | 237 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 3083522 | 3083522 | PRJNA556992_P_NODE_748303_length_248_cov_5.885714_g746114_i0 | PRJNA556992 | 748303 | 248 | 5.885714 | 14.59657072 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 215 | 2.7e-51 | NTclustered | gi|2511631678|gb|CP126123.1| | 70125 | g746114 | i0 | 82.329 | 1.35483870967742 | 249 | 42 | 100 | 2 | 1 | 248 | 3563719 | 3563966 | MAG: Nitrospira sp. isolate bin_003 chromosome, complete genome | blastn | 336 | 215 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 3678675 | 3678675 | PRJNA556992_P_NODE_761843_length_248_cov_0.880000_g759654_i0 | PRJNA556992 | 761843 | 248 | 0.88 | 2.1824 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 112 | 5.79e-28 | NR | MBI4000190.1 | 330214 | g759654 | i0 | 83.8 | 1.77822580645161 | 68 | 11 | 82.3 | 0 | 13 | 216 | 76 | 143 | MBI4000190.1 DUF4157 domain-containing protein [Nitrospira defluvii] | diamond | 441 | 113 | 0.991150442477876 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira defluvii | ||
| 4355714 | 4355714 | PRJNA556992_P_NODE_417164_length_275_cov_1.361386_g414975_i0 | PRJNA556992 | 417164 | 275 | 1.361386 | 3.7438115 | Nitrospira | 1234 | Bacteria | Bacteria | 179 | 3.46e-53 | NR | MBH0195980.1 | 70125 | g414975 | i0 | 98.9 | 1.98545454545455 | 91 | 1 | 99.3 | 0 | 274 | 2 | 155 | 245 | MBH0195980.1 GTP-binding protein [Nitrospira sp.] | diamond | 546 | 180 | 0.994444444444444 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 4359764 | 4359764 | PRJNA556992_P_NODE_742604_length_249_cov_0.875000_g740415_i0 | PRJNA556992 | 742604 | 249 | 0.875 | 2.17875 | Nitrospira moscoviensis | 42253 | Bacteria | Bacteria | 172 | 1.66e-38 | NTclustered | gi|922305621|gb|CP011801.1| | 42253 | g740415 | i0 | 79.283 | 1.00803212851406 | 251 | 48 | 100 | 4 | 1 | 249 | 517037 | 517285 | Nitrospira moscoviensis strain NSP M-1, complete genome | blastn | 251 | 172 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira moscoviensis | ||
| 4953567 | 4953567 | PRJNA556992_P_NODE_234884_length_310_cov_3.194093_g232696_i0 | PRJNA556992 | 234884 | 310 | 3.194093 | 9.9016883 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 174 | 2.55e-51 | NR | MDF0675460.1 | 70125 | g232696 | i0 | 85.4 | 3.96774193548387 | 103 | 11 | 99.7 | 1 | 309 | 1 | 11 | 109 | MDF0675460.1 ABC transporter ATP-binding protein [Nitrospira sp.] | diamond | 1230 | 174 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 5633011 | 5633011 | PRJNA556992_P_NODE_471105_length_270_cov_1.258883_g468916_i0 | PRJNA556992 | 471105 | 270 | 1.258883 | 3.3989841 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 174 | 4.65e-53 | NR | WP_173894081.1 | 1871110 | g468916 | i0 | 88.8 | 2.96666666666667 | 89 | 10 | 98.9 | 0 | 3 | 269 | 21 | 109 | WP_173894081.1 phage tail sheath family protein, partial [Thermodesulfovibrio sp. N1] | diamond | 801 | 174 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Thermodesulfovibrionia | Thermodesulfovibrionales | Thermodesulfovibrionaceae | Thermodesulfovibrio | Thermodesulfovibrio sp. N1 | ||
| 5635326 | 5635326 | PRJNA556992_P_NODE_655365_length_254_cov_3.287293_g653176_i0 | PRJNA556992 | 655365 | 254 | 3.287293 | 8.34972422 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 124 | 5.54e-31 | NR | MEK6684437.1 | 2026887 | g653176 | i0 | 64.3 | 1.98425196850394 | 84 | 30 | 99.2 | 0 | 254 | 3 | 319 | 402 | MEK6684437.1 phage portal protein [Nitrospirota bacterium] | diamond | 504 | 125 | 0.992 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 5638221 | 5638221 | PRJNA556992_P_NODE_894065_length_241_cov_1.529762_g891875_i0 | PRJNA556992 | 894065 | 241 | 1.529762 | 3.68672642 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 137 | 5.82e-28 | NTclustered | gi|2194428397|gb|CP092079.1| | 70125 | g891875 | i0 | 81.176 | 0.705394190871369 | 170 | 32 | 71 | 0 | 18 | 187 | 361550 | 361719 | MAG: Nitrospira sp. isolate UBC3 chromosome | blastn | 170 | 137 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 5638549 | 5638549 | PRJNA556992_P_NODE_919985_length_239_cov_2.054217_g917795_i0 | PRJNA556992 | 919985 | 239 | 2.054217 | 4.90957863 | Nitrospira moscoviensis | 42253 | Bacteria | Bacteria | 403 | 5.15e-108 | NTclustered | gi|922305621|gb|CP011801.1| | 42253 | g917795 | i0 | 97.071 | 1 | 239 | 7 | 100 | 0 | 1 | 239 | 671173 | 671411 | Nitrospira moscoviensis strain NSP M-1, complete genome | blastn | 239 | 403 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira moscoviensis | ||
| 6230471 | 6230471 | PRJNA556992_P_NODE_578105_length_260_cov_5.208556_g575916_i0 | PRJNA556992 | 578105 | 260 | 5.208556 | 13.5422456 | Leptospirillum | 179 | Bacteria | Bacteria | 102 | 2.32e-17 | NTclustered | gi|406772829|gb|CP002919.1| | 1048260 | g575916 | i0 | 85.185 | 25.3115384615385 | 108 | 6 | 41 | 8 | 148 | 253 | 2098255 | 2098354 | Leptospirillum ferriphilum ML-04, complete genome | blastn | 6581 | 102 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Leptospirillum | Leptospirillum ferriphilum | ||
| 6900289 | 6900289 | PRJNA556992_P_NODE_1049946_length_225_cov_4.118421_g1047756_i0 | PRJNA556992 | 1049946 | 225 | 4.118421 | 9.26644725 | Nitrospira defluvii | 330214 | Bacteria | Bacteria | 289 | 1.3999999999999997e-73 | NTclustered | gi|300603458|emb|FP929003.1| | 330214 | g1047756 | i0 | 89.778 | 1 | 225 | 23 | 100 | 0 | 1 | 225 | 2492482 | 2492258 | Candidatus Nitrospira defluvii chromosome, complete genome | blastn | 225 | 289 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira defluvii | ||
| 6903107 | 6903107 | PRJNA556992_P_NODE_187946_length_334_cov_1.402299_g185758_i0 | PRJNA556992 | 187946 | 334 | 1.402299 | 4.68367866 | Candidatus Manganitrophaceae bacterium | 2932367 | Bacteria | Bacteria | 521 | 2e-143 | NTclustered | gi|2874254047|emb|OY970371.1| | 2932367 | g185758 | i0 | 94.91 | 195.622754491018 | 334 | 16 | 100 | 1 | 1 | 334 | 2247216 | 2247548 | MAG: Candidatus Manganitrophaceae bacterium isolate MFD03066.bin.c.2 genome assembly, chromosome: 1 | blastn | 65338 | 521 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Candidatus Troglogloeales | Candidatus Manganitrophaceae | Candidatus Manganitrophaceae bacterium | |||
| 6905434 | 6905434 | PRJNA556992_P_NODE_341986_length_283_cov_1.690476_g339797_i0 | PRJNA556992 | 341986 | 283 | 1.690476 | 4.78404708 | Nitrospira japonica | 1325564 | Bacteria | Bacteria | 484 | 2.1699999999999994e-132 | NTclustered | gi|1167499077|emb|LT828648.1| | 1325564 | g339797 | i0 | 97.857 | 1.98233215547703 | 280 | 6 | 99 | 0 | 4 | 283 | 3282087 | 3281808 | Nitrospira japonica isolate Genome sequencing of Nitrospira japonica strain NJ11 genome assembly, chromosome: I | blastn | 561 | 484 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira japonica | ||
| 6910351 | 6910351 | PRJNA556992_P_NODE_735266_length_249_cov_2.392045_g733077_i0 | PRJNA556992 | 735266 | 249 | 2.392045 | 5.95619205 | Nitrospira japonica | 1325564 | Bacteria | Bacteria | 405 | 1.5e-108 | NTclustered | gi|1167499077|emb|LT828648.1| | 1325564 | g733077 | i0 | 95.984 | 1.86746987951807 | 249 | 10 | 100 | 0 | 1 | 249 | 718588 | 718836 | Nitrospira japonica isolate Genome sequencing of Nitrospira japonica strain NJ11 genome assembly, chromosome: I | blastn | 465 | 405 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira japonica | ||
| 7505482 | 7505482 | PRJNA556992_P_NODE_763306_length_248_cov_0.880000_g761117_i0 | PRJNA556992 | 763306 | 248 | 0.88 | 2.1824 | Nitrospira | 1234 | Bacteria | Bacteria | 166 | 1.8700000000000002e-49 | NR | MBH0197536.1 | 70125 | g761117 | i0 | 98.8 | 9.91935483870968 | 82 | 1 | 99.2 | 0 | 3 | 248 | 135 | 216 | MBH0197536.1 ABC transporter ATP-binding protein [Nitrospira sp.] | diamond | 2460 | 166 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 8183231 | 8183231 | PRJNA556992_P_NODE_571267_length_261_cov_2.239362_g569078_i0 | PRJNA556992 | 571267 | 261 | 2.239362 | 5.84473482 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 414 | 2.63e-111 | NTclustered | gi|2194428397|gb|CP092079.1| | 70125 | g569078 | i0 | 95.385 | 6.75478927203065 | 260 | 12 | 99 | 0 | 2 | 261 | 2149746 | 2149487 | MAG: Nitrospira sp. isolate UBC3 chromosome | blastn | 1763 | 414 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 8188375 | 8188375 | PRJNA556992_P_NODE_986267_length_232_cov_2.471698_g984077_i0 | PRJNA556992 | 986267 | 232 | 2.471698 | 5.73433936 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 424 | 3.82e-114 | NTclustered | gi|2194428397|gb|CP092079.1| | 70125 | g984077 | i0 | 99.569 | 3.00862068965517 | 232 | 1 | 100 | 0 | 1 | 232 | 2102110 | 2101879 | MAG: Nitrospira sp. isolate UBC3 chromosome | blastn | 698 | 424 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 9454974 | 9454974 | PRJNA556992_P_NODE_279628_length_293_cov_2.113636_g277439_i0 | PRJNA556992 | 279628 | 293 | 2.113636 | 6.19295348 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 490 | 4.86e-134 | NTclustered | gi|2511640680|gb|CP126121.1| | 70125 | g277439 | i0 | 96.918 | 17.0477815699659 | 292 | 9 | 99 | 0 | 2 | 293 | 2738146 | 2737855 | MAG: Nitrospira sp. isolate bin_001 chromosome, complete genome | blastn | 4995 | 490 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 9460674 | 9460674 | PRJNA556992_P_NODE_720068_length_250_cov_1.638418_g717879_i0 | PRJNA556992 | 720068 | 250 | 1.638418 | 4.096045 | Nitrospiraceae bacterium | 2026770 | Bacteria | Bacteria | 136 | 1.0299999999999999e-38 | NR | MBD0315446.1 | 2026770 | g717879 | i0 | 80.7 | 0.996 | 83 | 16 | 99.6 | 0 | 2 | 250 | 91 | 173 | MBD0315446.1 ComF family protein [Nitrospiraceae bacterium] | diamond | 249 | 136 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospiraceae bacterium | |||
| 10055289 | 10055289 | PRJNA556992_P_NODE_590828_length_259_cov_4.543011_g588639_i0 | PRJNA556992 | 590828 | 259 | 4.543011 | 11.76639849 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 177 | 3.37e-51 | NR | HWV45501.1 | 70125 | g588639 | i0 | 86 | 2.98841698841699 | 86 | 12 | 99.6 | 0 | 258 | 1 | 49 | 134 | HWV45501.1 hypothetical protein [Nitrospira sp.] | diamond | 774 | 177 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 10726199 | 10726199 | PRJNA556992_P_NODE_1020289_length_228_cov_4.077419_g1018099_i0 | PRJNA556992 | 1020289 | 228 | 4.077419 | 9.29651532 | Leptospirillum ferriphilum | 178606 | Bacteria | Bacteria | 399 | 6.299999999999999e-107 | NTclustered | gi|68053494|gb|DQ057986.1| | 178606 | g1018099 | i0 | 98.246 | 103.982456140351 | 228 | 4 | 100 | 0 | 1 | 228 | 7663 | 7436 | Leptospirillum ferriphilum transposon TnLfArs, complete sequence | blastn | 23708 | 399 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Leptospirillum | Leptospirillum ferriphilum | ||
| 10726454 | 10726454 | PRJNA556992_P_NODE_1044909_length_226_cov_2.392157_g1042719_i0 | PRJNA556992 | 1044909 | 226 | 2.392157 | 5.40627482 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 215 | 2.42e-51 | NTclustered | gi|2194428397|gb|CP092079.1| | 70125 | g1042719 | i0 | 84.163 | 364.438053097345 | 221 | 35 | 98 | 0 | 2 | 222 | 2506555 | 2506775 | MAG: Nitrospira sp. isolate UBC3 chromosome | blastn | 82363 | 215 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 10731770 | 10731770 | PRJNA556992_P_NODE_347029_length_282_cov_3.267943_g344840_i0 | PRJNA556992 | 347029 | 282 | 3.267943 | 9.21559926 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 183 | 2.5e-51 | NR | NOS77796.1 | 70125 | g344840 | i0 | 98.9 | 0.98936170212766 | 93 | 1 | 98.9 | 0 | 2 | 280 | 492 | 584 | NOS77796.1 type I restriction endonuclease subunit R [Nitrospira sp.] | diamond | 279 | 183 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 10736931 | 10736931 | PRJNA556992_P_NODE_765809_length_248_cov_0.880000_g763620_i0 | PRJNA556992 | 765809 | 248 | 0.88 | 2.1824 | Nitrospira japonica | 1325564 | Bacteria | Bacteria | 176 | 1.28e-39 | NTclustered | gi|1167499077|emb|LT828648.1| | 1325564 | g763620 | i0 | 79.842 | 1.72177419354839 | 253 | 41 | 100 | 9 | 1 | 248 | 1945329 | 1945576 | Nitrospira japonica isolate Genome sequencing of Nitrospira japonica strain NJ11 genome assembly, chromosome: I | blastn | 427 | 176 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira japonica | ||
| 10737138 | 10737138 | PRJNA556992_P_NODE_78229_length_437_cov_224.129121_g76050_i0 | PRJNA556992 | 78229 | 437 | 224.129121 | 979.44425877 | Nitrospirales bacterium | 2358460 | Bacteria | Bacteria | 63.9 | 1.95e-5 | NTclustered | gi|2893358438|emb|OZ220730.1| | 2358460 | g76050 | i0 | 100 | 0.0778032036613272 | 34 | 0 | 8 | 0 | 59 | 92 | 499170 | 499137 | MAG: Nitrospirales bacterium isolate ced9b145-61b7-4a30-bbb5-3bebf98741de genome assembly, chromosome: 1 | blastn | 34 | 63.9 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospirales bacterium | ||||
| 10737728 | 10737728 | PRJNA556992_P_NODE_830989_length_244_cov_2.461988_g828799_i0 | PRJNA556992 | 830989 | 244 | 2.461988 | 6.00725072 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 107 | 5.58e-28 | NR | MEK6700544.1 | 2026887 | g828799 | i0 | 60.5 | 0.995901639344262 | 81 | 32 | 99.6 | 0 | 244 | 2 | 11 | 91 | MEK6700544.1 helix-turn-helix transcriptional regulator [Nitrospirota bacterium] | diamond | 243 | 107 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 10739261 | 10739261 | PRJNA556992_P_NODE_955529_length_235_cov_2.882716_g953339_i0 | PRJNA556992 | 955529 | 235 | 2.882716 | 6.7743826 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 209 | 1.18e-49 | NTclustered | gi|2290907019|gb|CP060499.1| | 70125 | g953339 | i0 | 85.024 | 3.51914893617021 | 207 | 29 | 88 | 2 | 1 | 206 | 890983 | 891188 | MAG: Nitrospira sp. isolate DH1 chromosome, complete genome | blastn | 827 | 209 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 12000831 | 12000831 | PRJNA556992_P_NODE_100790_length_404_cov_2.864048_g98606_i0 | PRJNA556992 | 100790 | 404 | 2.864048 | 11.57075392 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 259 | 2.13e-64 | NTclustered | gi|2621702110|emb|OY760142.1| | 2026887 | g98606 | i0 | 81.024 | 378.549504950495 | 332 | 57 | 82 | 6 | 9 | 338 | 1459192 | 1459519 | MAG: Nitrospirota bacterium isolate 41fe4016-ed88-40a2-aca4-2b8d86c50af7 genome assembly, chromosome: 1 | blastn | 152934 | 259 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 12004809 | 12004809 | PRJNA556992_P_NODE_237810_length_310_cov_2.590717_g235622_i0 | PRJNA556992 | 237810 | 310 | 2.590717 | 8.0312227 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 278 | 4.39e-70 | NTclustered | gi|2290915413|gb|CP060502.1| | 70125 | g235622 | i0 | 100 | 1.93548387096774 | 150 | 0 | 97 | 0 | 1 | 150 | 184972 | 185121 | MAG: Nitrospira sp. isolate NSFW plasmid pNSFW1, complete sequence | blastn | 600 | 278 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 12006255 | 12006255 | PRJNA556992_P_NODE_332950_length_284_cov_2.066351_g330761_i0 | PRJNA556992 | 332950 | 284 | 2.066351 | 5.86843684 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 303 | 6.56e-78 | NTclustered | gi|2194428397|gb|CP092079.1| | 70125 | g330761 | i0 | 86.594 | 0.971830985915493 | 276 | 36 | 97 | 1 | 9 | 283 | 2640571 | 2640846 | MAG: Nitrospira sp. isolate UBC3 chromosome | blastn | 276 | 303 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 12008666 | 12008666 | PRJNA556992_P_NODE_52030_length_505_cov_3.858796_g49869_i0 | PRJNA556992 | 52030 | 505 | 3.858796 | 19.4869198 | Nitrospira moscoviensis | 42253 | Bacteria | Bacteria | 767 | 0 | NTclustered | gi|922305621|gb|CP011801.1| | 42253 | g49869 | i0 | 94.059 | 140.29504950495 | 505 | 30 | 100 | 0 | 1 | 505 | 1278475 | 1278979 | Nitrospira moscoviensis strain NSP M-1, complete genome | blastn | 70849 | 767 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira moscoviensis | ||
| 12010634 | 12010634 | PRJNA556992_P_NODE_682150_length_252_cov_2.826816_g679961_i0 | PRJNA556992 | 682150 | 252 | 2.826816 | 7.12357632 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 93.2 | 2.2e-21 | NR | OIP63251.1 | 1805278 | g679961 | i0 | 63 | 1.95238095238095 | 81 | 30 | 96.4 | 0 | 245 | 3 | 19 | 99 | OIP63251.1 MAG: hypothetical protein AUK29_06885 [Nitrospirae bacterium CG2_30_53_67] | diamond | 492 | 93.2 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirae bacterium CG2_30_53_67 | ||||||
| 13278791 | 13278791 | PRJNA556992_P_NODE_163691_length_349_cov_0.938406_g161503_i0 | PRJNA556992 | 163691 | 349 | 0.938406 | 3.27503694 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 527 | 4.489999999999998e-145 | NTclustered | gi|2290907019|gb|CP060499.1| | 70125 | g161503 | i0 | 97.411 | 233.249283667622 | 309 | 8 | 89 | 0 | 41 | 349 | 2683335 | 2683643 | MAG: Nitrospira sp. isolate DH1 chromosome, complete genome | blastn | 81404 | 527 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 13279509 | 13279509 | PRJNA556992_P_NODE_207171_length_323_cov_2.884000_g204983_i0 | PRJNA556992 | 207171 | 323 | 2.884 | 9.31532 | Candidatus Nitrospira inopinata | 1715989 | Bacteria | Bacteria | 508 | 1.5e-139 | NTclustered | gi|952974062|emb|LN885086.1| | 1715989 | g204983 | i0 | 95.046 | 2.9969040247678 | 323 | 16 | 100 | 0 | 1 | 323 | 2886926 | 2886604 | Nitrospira sp. ENR4 genome assembly NiCh1, chromosome : 1 | blastn | 968 | 508 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Candidatus Nitrospira inopinata | ||
| 13279940 | 13279940 | PRJNA556992_P_NODE_235071_length_310_cov_3.135021_g232883_i0 | PRJNA556992 | 235071 | 310 | 3.135021 | 9.7185651 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 278 | 4.39e-70 | NTclustered | gi|2290915413|gb|CP060502.1| | 70125 | g232883 | i0 | 100 | 1.93548387096774 | 150 | 0 | 97 | 0 | 161 | 310 | 181648 | 181499 | MAG: Nitrospira sp. isolate NSFW plasmid pNSFW1, complete sequence | blastn | 600 | 278 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 13280867 | 13280867 | PRJNA556992_P_NODE_296131_length_289_cov_2.819444_g293942_i0 | PRJNA556992 | 296131 | 289 | 2.819444 | 8.14819316 | Candidatus Manganitrophus sp. | 2927580 | Bacteria | Bacteria | 283 | 8.71e-72 | NTclustered | gi|2449738114|gb|CP114561.1| | 2927580 | g293942 | i0 | 89.732 | 73.6678200692042 | 224 | 20 | 77 | 3 | 68 | 289 | 2654988 | 2654766 | MAG: Candidatus Manganitrophus sp. isolate GAC4 chromosome, complete genome | blastn | 21290 | 283 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Candidatus Troglogloeales | Candidatus Manganitrophaceae | Candidatus Manganitrophus | Candidatus Manganitrophus sp. | ||
| 13280868 | 13280868 | PRJNA556992_P_NODE_296171_length_289_cov_2.777778_g293982_i0 | PRJNA556992 | 296171 | 289 | 2.777778 | 8.02777842 | Candidatus Nitrospira inopinata | 1715989 | Bacteria | Bacteria | 444 | 3.78e-120 | NTclustered | gi|952974062|emb|LN885086.1| | 1715989 | g293982 | i0 | 94.444 | 2.99653979238754 | 288 | 16 | 99 | 0 | 2 | 289 | 2883223 | 2883510 | Nitrospira sp. ENR4 genome assembly NiCh1, chromosome : 1 | blastn | 866 | 444 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Candidatus Nitrospira inopinata | ||
| 13284918 | 13284918 | PRJNA556992_P_NODE_610771_length_258_cov_1.724324_g608582_i0 | PRJNA556992 | 610771 | 258 | 1.724324 | 4.44875592 | Nitrospira moscoviensis | 42253 | Bacteria | Bacteria | 392 | 1.2199999999999997e-104 | NTclustered | gi|922305621|gb|CP011801.1| | 42253 | g608582 | i0 | 94.163 | 39.8139534883721 | 257 | 15 | 99 | 0 | 1 | 257 | 1277472 | 1277728 | Nitrospira moscoviensis strain NSP M-1, complete genome | blastn | 10272 | 392 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira moscoviensis | ||
| 13286440 | 13286440 | PRJNA556992_P_NODE_734951_length_249_cov_2.471591_g732762_i0 | PRJNA556992 | 734951 | 249 | 2.471591 | 6.15426159 | Nitrospira moscoviensis | 42253 | Bacteria | Bacteria | 381 | 2.5299999999999995e-101 | NTclustered | gi|557791673|gb|KC884854.1| | 42253 | g732762 | i0 | 94.694 | 112.012048192771 | 245 | 13 | 98 | 0 | 3 | 247 | 899 | 655 | Nitrospira moscoviensis strain M-1 clone 3 nitrite oxidoreductase beta subunit (nxrB) gene, partial cds | blastn | 27891 | 381 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira moscoviensis | ||
| 13286486 | 13286486 | PRJNA556992_P_NODE_739651_length_249_cov_1.602273_g737462_i0 | PRJNA556992 | 739651 | 249 | 1.602273 | 3.98965977 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 339 | 1.5399999999999998e-88 | NTclustered | gi|2194432121|gb|CP092081.1| | 70125 | g737462 | i0 | 91.165 | 2.86345381526104 | 249 | 22 | 100 | 0 | 1 | 249 | 2070757 | 2071005 | MAG: Nitrospira sp. isolate UBC2 chromosome | blastn | 713 | 339 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 14550933 | 14550933 | PRJNA556992_P_NODE_1009272_length_229_cov_5.032051_g1007082_i0 | PRJNA556992 | 1009272 | 229 | 5.032051 | 11.52339679 | Nitrospira defluvii | 330214 | Bacteria | Bacteria | 211 | 3.19e-50 | NTclustered | gi|300603458|emb|FP929003.1| | 330214 | g1007082 | i0 | 88.571 | 0.764192139737991 | 175 | 18 | 76 | 2 | 1 | 174 | 3631488 | 3631661 | Candidatus Nitrospira defluvii chromosome, complete genome | blastn | 175 | 211 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira defluvii | ||
| 15824724 | 15824724 | PRJNA556992_P_NODE_1013493_length_229_cov_2.935897_g1011303_i0 | PRJNA556992 | 1013493 | 229 | 2.935897 | 6.72320413 | Nitrospira moscoviensis | 42253 | Bacteria | Bacteria | 379 | 8.249999999999999e-101 | NTclustered | gi|922305621|gb|CP011801.1| | 42253 | g1011303 | i0 | 96.507 | 1 | 229 | 8 | 100 | 0 | 1 | 229 | 3896084 | 3896312 | Nitrospira moscoviensis strain NSP M-1, complete genome | blastn | 229 | 379 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira moscoviensis | ||
| 15825027 | 15825027 | PRJNA556992_P_NODE_1037993_length_226_cov_5.450980_g1035803_i0 | PRJNA556992 | 1037993 | 226 | 5.45098 | 12.3192148 | Nitrospira sp. KM1 | 1936990 | Bacteria | Bacteria | 346 | 8.24e-91 | NTclustered | gi|1808878785|dbj|AP022671.1| | 1936990 | g1035803 | i0 | 94.248 | 1 | 226 | 13 | 100 | 0 | 1 | 226 | 3867629 | 3867854 | Nitrospira sp. KM1 DNA, complete genome | blastn | 226 | 346 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. KM1 | ||
| 15829805 | 15829805 | PRJNA556992_P_NODE_308893_length_287_cov_3.672897_g306704_i0 | PRJNA556992 | 308893 | 287 | 3.672897 | 10.54121439 | Candidatus Manganitrophus sp. | 2927580 | Bacteria | Bacteria | 274 | 5.199999999999998e-69 | NTclustered | gi|2449729286|gb|CP114553.1| | 2927580 | g306704 | i0 | 83.972 | 558.641114982578 | 287 | 44 | 100 | 2 | 1 | 287 | 491671 | 491387 | MAG: Candidatus Manganitrophus sp. isolate GAC1 chromosome, complete genome | blastn | 160330 | 274 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Candidatus Troglogloeales | Candidatus Manganitrophaceae | Candidatus Manganitrophus | Candidatus Manganitrophus sp. | ||
| 15830039 | 15830039 | PRJNA556992_P_NODE_324693_length_285_cov_2.386792_g322504_i0 | PRJNA556992 | 324693 | 285 | 2.386792 | 6.8023572 | Nitrospira | 1234 | Bacteria | Bacteria | 191 | 5.099999999999999e-56 | NR | MBH0199636.1 | 70125 | g322504 | i0 | 97.9 | 3.95789473684211 | 94 | 2 | 98.9 | 0 | 284 | 3 | 371 | 464 | MBH0199636.1 acetolactate synthase large subunit [Nitrospira sp.] | diamond | 1128 | 191 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 15832853 | 15832853 | PRJNA556992_P_NODE_544173_length_263_cov_3.163158_g541984_i0 | PRJNA556992 | 544173 | 263 | 3.163158 | 8.31910554 | Nitrospira | 1234 | Bacteria | Bacteria | 157 | 8.9e-45 | NR | MDP3091763.1 | 70125 | g541984 | i0 | 91.5 | 6.55893536121673 | 82 | 7 | 93.5 | 0 | 263 | 18 | 275 | 356 | MDP3091763.1 alkene reductase [Nitrospira sp.] | diamond | 1725 | 157 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 17105603 | 17105603 | PRJNA556992_P_NODE_374934_length_279_cov_2.179612_g372745_i0 | PRJNA556992 | 374934 | 279 | 2.179612 | 6.08111748 | Nitrospira defluvii | 330214 | Bacteria | Bacteria | 250 | 8.49e-62 | NTclustered | gi|300603458|emb|FP929003.1| | 330214 | g372745 | i0 | 88.462 | 0.745519713261649 | 208 | 22 | 74 | 2 | 72 | 278 | 2049549 | 2049755 | Candidatus Nitrospira defluvii chromosome, complete genome | blastn | 208 | 250 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira defluvii | ||
| 17109476 | 17109476 | PRJNA556992_P_NODE_687294_length_252_cov_1.653631_g685105_i0 | PRJNA556992 | 687294 | 252 | 1.653631 | 4.16715012 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 176 | 5.25e-54 | NR | MBH0187476.1 | 70125 | g685105 | i0 | 92.8 | 3.95238095238095 | 83 | 6 | 98.8 | 0 | 250 | 2 | 99 | 181 | MBH0187476.1 carotenoid biosynthesis protein [Nitrospira sp.] | diamond | 996 | 176 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 17111856 | 17111856 | PRJNA556992_P_NODE_872194_length_242_cov_1.822485_g870004_i0 | PRJNA556992 | 872194 | 242 | 1.822485 | 4.4104137 | Candidatus Nitrospira kreftii | 2652173 | Bacteria | Bacteria | 267 | 7.15e-67 | NTclustered | gi|1884724763|gb|CP047423.1| | 2652173 | g870004 | i0 | 86.667 | 0.991735537190083 | 240 | 32 | 99 | 0 | 3 | 242 | 4006626 | 4006865 | Candidatus Nitrospira kreftii isolate comreactor17 chromosome, complete genome | blastn | 240 | 267 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Candidatus Nitrospira kreftii | ||
| 18375214 | 18375214 | PRJNA556992_P_NODE_1130195_length_206_cov_4.255639_g1128004_i0 | PRJNA556992 | 1130195 | 206 | 4.255639 | 8.76661634 | Nitrospira moscoviensis | 42253 | Bacteria | Bacteria | 195 | 2.83e-45 | NTclustered | gi|922305621|gb|CP011801.1| | 42253 | g1128004 | i0 | 87.879 | 3.76699029126214 | 165 | 20 | 80 | 0 | 36 | 200 | 1378287 | 1378123 | Nitrospira moscoviensis strain NSP M-1, complete genome | blastn | 776 | 195 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira moscoviensis | ||
| 18386927 | 18386927 | PRJNA556992_P_NODE_947615_length_236_cov_2.417178_g945425_i0 | PRJNA556992 | 947615 | 236 | 2.417178 | 5.70454008 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 252 | 1.94e-62 | NTclustered | gi|2511640680|gb|CP126121.1| | 70125 | g945425 | i0 | 87.85 | 8.52542372881356 | 214 | 26 | 91 | 0 | 1 | 214 | 3171572 | 3171785 | MAG: Nitrospira sp. isolate bin_001 chromosome, complete genome | blastn | 2012 | 252 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 19652593 | 19652593 | PRJNA556992_P_NODE_257016_length_302_cov_1.344978_g254827_i0 | PRJNA556992 | 257016 | 302 | 1.344978 | 4.06183356 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 366 | 8.84e-97 | NTclustered | gi|2621702110|emb|OY760142.1| | 2026887 | g254827 | i0 | 90.071 | 389.682119205298 | 282 | 28 | 93 | 0 | 1 | 282 | 1459078 | 1458797 | MAG: Nitrospirota bacterium isolate 41fe4016-ed88-40a2-aca4-2b8d86c50af7 genome assembly, chromosome: 1 | blastn | 117684 | 366 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 19654958 | 19654958 | PRJNA556992_P_NODE_430796_length_273_cov_3.850000_g428607_i0 | PRJNA556992 | 430796 | 273 | 3.85 | 10.5105 | Thermodesulfovibrio autotrophicus | 3118333 | Bacteria | Bacteria | 52.8 | 0.025 | NTclustered | gi|2752966453|gb|CP144373.1| | 3118333 | g428607 | i0 | 100 | 0.102564102564103 | 28 | 0 | 10 | 0 | 152 | 179 | 879599 | 879572 | Thermodesulfovibrio autotrophicus strain 3907-1M chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Thermodesulfovibrionia | Thermodesulfovibrionales | Thermodesulfovibrionaceae | Thermodesulfovibrio | Thermodesulfovibrio autotrophicus | ||
| 19656686 | 19656686 | PRJNA556992_P_NODE_572536_length_261_cov_2.005319_g570347_i0 | PRJNA556992 | 572536 | 261 | 2.005319 | 5.23388259 | Nitrospira defluvii | 330214 | Bacteria | Bacteria | 460 | 3.3399999999999995e-125 | NTclustered | gi|300603458|emb|FP929003.1| | 330214 | g570347 | i0 | 98.467 | 2.00383141762452 | 261 | 4 | 100 | 0 | 1 | 261 | 101449 | 101189 | Candidatus Nitrospira defluvii chromosome, complete genome | blastn | 523 | 460 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira defluvii | ||
| 19659249 | 19659249 | PRJNA556992_P_NODE_77896_length_438_cov_3.052055_g75717_i0 | PRJNA556992 | 77896 | 438 | 3.052055 | 13.3680009 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 241 | 5.309999999999999e-74 | NR | HET6371201.1 | 2306052 | g75717 | i0 | 83.6 | 27 | 146 | 24 | 100 | 0 | 438 | 1 | 13 | 158 | HET6371201.1 NADP-dependent isocitrate dehydrogenase [Nitrospiria bacterium] | diamond | 11826 | 243 | 0.991769547325103 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospiria bacterium | |||||
| 19660840 | 19660840 | PRJNA556992_P_NODE_902476_length_240_cov_5.233533_g900286_i0 | PRJNA556992 | 902476 | 240 | 5.233533 | 12.5604792 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 333 | 6.88e-87 | NTclustered | gi|2511635996|gb|CP126122.1| | 70125 | g900286 | i0 | 91.463 | 45.8375 | 246 | 15 | 100 | 3 | 1 | 240 | 120675 | 120920 | MAG: Nitrospira sp. isolate bin_005 chromosome | blastn | 11001 | 333 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 20253062 | 20253062 | PRJNA556992_P_NODE_495356_length_267_cov_4.917526_g493167_i0 | PRJNA556992 | 495356 | 267 | 4.917526 | 13.12979442 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 157 | 1.9e-42 | NR | MDH5336414.1 | 70125 | g493167 | i0 | 92 | 5.93258426966292 | 88 | 7 | 98.9 | 0 | 266 | 3 | 1410 | 1497 | MDH5336414.1 PAS domain S-box protein [Nitrospira sp.] | diamond | 1584 | 157 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 20925894 | 20925894 | PRJNA556992_P_NODE_1161737_length_199_cov_4.460317_g1159546_i0 | PRJNA556992 | 1161737 | 199 | 4.460317 | 8.87603083 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 340 | 3.2899999999999996e-89 | NTclustered | gi|2863129529|dbj|AP038806.1| | 70125 | g1159546 | i0 | 97.487 | 2.65829145728643 | 199 | 5 | 100 | 0 | 1 | 199 | 1940066 | 1939868 | MAG: Nitrospira sp. NFB02 DNA, complete genome | blastn | 529 | 340 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 20928906 | 20928906 | PRJNA556992_P_NODE_298637_length_289_cov_1.425926_g296448_i0 | PRJNA556992 | 298637 | 289 | 1.425926 | 4.12092614 | Nitrospira moscoviensis | 42253 | Bacteria | Bacteria | 484 | 2.2299999999999998e-132 | NTclustered | gi|922305621|gb|CP011801.1| | 42253 | g296448 | i0 | 96.886 | 2 | 289 | 9 | 100 | 0 | 1 | 289 | 115254 | 114966 | Nitrospira moscoviensis strain NSP M-1, complete genome | blastn | 578 | 484 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira moscoviensis | ||
| 20932161 | 20932161 | PRJNA556992_P_NODE_553377_length_262_cov_6.343915_g551188_i0 | PRJNA556992 | 553377 | 262 | 6.343915 | 16.6210573 | Candidatus Manganitrophus sp. | 2927580 | Bacteria | Bacteria | 257 | 4.7200000000000005e-64 | NTclustered | gi|2449738114|gb|CP114561.1| | 2927580 | g551188 | i0 | 84.411 | 97.4465648854962 | 263 | 40 | 100 | 1 | 1 | 262 | 2261011 | 2260749 | MAG: Candidatus Manganitrophus sp. isolate GAC4 chromosome, complete genome | blastn | 25531 | 257 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Candidatus Troglogloeales | Candidatus Manganitrophaceae | Candidatus Manganitrophus | Candidatus Manganitrophus sp. | ||
| 20932281 | 20932281 | PRJNA556992_P_NODE_56337_length_490_cov_4.539568_g54172_i0 | PRJNA556992 | 56337 | 490 | 4.539568 | 22.2438832 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 806 | 0 | NTclustered | gi|2863125063|dbj|AP038805.1| | 70125 | g54172 | i0 | 96.327 | 197.563265306122 | 490 | 18 | 100 | 0 | 1 | 490 | 2095172 | 2094683 | MAG: Nitrospira sp. AFB01 DNA, complete genome | blastn | 96806 | 806 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 22211897 | 22211897 | PRJNA556992_P_NODE_927198_length_238_cov_2.666667_g925008_i0 | PRJNA556992 | 927198 | 238 | 2.666667 | 6.34666746 | Nitrospira defluvii | 330214 | Bacteria | Bacteria | 412 | 8.51e-111 | NTclustered | gi|300603458|emb|FP929003.1| | 330214 | g925008 | i0 | 97.899 | 1 | 238 | 5 | 100 | 0 | 1 | 238 | 3918233 | 3917996 | Candidatus Nitrospira defluvii chromosome, complete genome | blastn | 238 | 412 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira defluvii | ||
| 23482775 | 23482775 | PRJNA556992_P_NODE_577639_length_260_cov_6.438503_g575450_i0 | PRJNA556992 | 577639 | 260 | 6.438503 | 16.7401078 | Nitrospira japonica | 1325564 | Bacteria | Bacteria | 470 | 5.519999999999998e-128 | NTclustered | gi|1167499077|emb|LT828648.1| | 1325564 | g575450 | i0 | 99.231 | 41.4461538461538 | 260 | 2 | 100 | 0 | 1 | 260 | 1905258 | 1905517 | Nitrospira japonica isolate Genome sequencing of Nitrospira japonica strain NJ11 genome assembly, chromosome: I | blastn | 10776 | 470 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira japonica | ||
| 23486241 | 23486241 | PRJNA556992_P_NODE_845319_length_243_cov_4.376471_g843129_i0 | PRJNA556992 | 845319 | 243 | 4.3764709999999996 | 10.63482453 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 168 | 5.549999999999999e-48 | NR | MEK6586491.1 | 2026887 | g843129 | i0 | 98.8 | 0.987654320987654 | 80 | 1 | 98.8 | 0 | 3 | 242 | 205 | 284 | MEK6586491.1 glutamine--tRNA ligase/YqeY domain fusion protein [Nitrospirota bacterium] | diamond | 240 | 168 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 24754112 | 24754112 | PRJNA556992_P_NODE_371100_length_280_cov_1.072464_g368911_i0 | PRJNA556992 | 371100 | 280 | 1.072464 | 3.0028992 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 507 | 4.58e-139 | NTclustered | gi|2290915413|gb|CP060502.1| | 70125 | g368911 | i0 | 99.286 | 1.73928571428571 | 280 | 2 | 100 | 0 | 1 | 280 | 9382 | 9103 | MAG: Nitrospira sp. isolate NSFW plasmid pNSFW1, complete sequence | blastn | 487 | 507 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 24754654 | 24754654 | PRJNA556992_P_NODE_41240_length_552_cov_14.688935_g39093_i0 | PRJNA556992 | 41240 | 552 | 14.688935 | 81.0829212 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 902 | 0 | NTclustered | gi|2511640680|gb|CP126121.1| | 70125 | g39093 | i0 | 96.35 | 82.106884057971 | 548 | 20 | 99 | 0 | 1 | 548 | 201909 | 201362 | MAG: Nitrospira sp. isolate bin_001 chromosome, complete genome | blastn | 45323 | 902 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 24755684 | 24755684 | PRJNA556992_P_NODE_496660_length_267_cov_3.515464_g494471_i0 | PRJNA556992 | 496660 | 267 | 3.515464 | 9.38628888 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 348 | 2.78e-91 | NTclustered | gi|2290911150|gb|CP060501.1| | 70125 | g494471 | i0 | 90.226 | 1.98501872659176 | 266 | 26 | 99 | 0 | 2 | 267 | 2810917 | 2810652 | MAG: Nitrospira sp. isolate NSFW chromosome, complete genome | blastn | 530 | 348 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 24756248 | 24756248 | PRJNA556992_P_NODE_545540_length_263_cov_2.678947_g543351_i0 | PRJNA556992 | 545540 | 263 | 2.678947 | 7.04563061 | Nitrospira japonica | 1325564 | Bacteria | Bacteria | 481 | 2.58e-131 | NTclustered | gi|1167499077|emb|LT828648.1| | 1325564 | g543351 | i0 | 99.62 | 8.1254752851711 | 263 | 1 | 100 | 0 | 1 | 263 | 3350180 | 3349918 | Nitrospira japonica isolate Genome sequencing of Nitrospira japonica strain NJ11 genome assembly, chromosome: I | blastn | 2137 | 481 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira japonica | ||
| 24758869 | 24758869 | PRJNA556992_P_NODE_758520_length_248_cov_1.674286_g756331_i0 | PRJNA556992 | 758520 | 248 | 1.674286 | 4.15222928 | Candidatus Manganitrophus sp. | 2927580 | Bacteria | Bacteria | 198 | 2.7199999999999993e-46 | NTclustered | gi|2449729286|gb|CP114553.1| | 2927580 | g756331 | i0 | 81.301 | 183.125 | 246 | 44 | 99 | 2 | 1 | 246 | 491655 | 491412 | MAG: Candidatus Manganitrophus sp. isolate GAC1 chromosome, complete genome | blastn | 45415 | 198 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Candidatus Troglogloeales | Candidatus Manganitrophaceae | Candidatus Manganitrophus | Candidatus Manganitrophus sp. | ||
| 24760557 | 24760557 | PRJNA556992_P_NODE_891240_length_241_cov_1.964286_g889050_i0 | PRJNA556992 | 891240 | 241 | 1.964286 | 4.73392926 | Nitrospira moscoviensis | 42253 | Bacteria | Bacteria | 359 | 1.1399999999999999e-94 | NTclustered | gi|922305621|gb|CP011801.1| | 42253 | g889050 | i0 | 95.536 | 110.228215767635 | 224 | 10 | 93 | 0 | 18 | 241 | 1277501 | 1277278 | Nitrospira moscoviensis strain NSP M-1, complete genome | blastn | 26565 | 359 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira moscoviensis | ||
| 25352741 | 25352741 | PRJNA556992_P_NODE_45860_length_530_cov_2.512035_g43703_i0 | PRJNA556992 | 45860 | 530 | 2.512035 | 13.3137855 | Nitrospira | 1234 | Bacteria | Bacteria | 808 | 0 | NTclustered | gi|922305621|gb|CP011801.1| | 42253 | g43703 | i0 | 94.151 | 147.175471698113 | 530 | 31 | 100 | 0 | 1 | 530 | 1277249 | 1277778 | Nitrospira moscoviensis strain NSP M-1, complete genome | blastn | 78003 | 808 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira moscoviensis | ||
| 26729787 | 26729787 | PRJNA556992_P_NODE_151861_length_357_cov_1.619718_g149673_i0 | PRJNA556992 | 151861 | 357 | 1.619718 | 5.78239326 | Thermodesulfovibrionia bacterium | 2814274 | Bacteria | Bacteria | 120 | 2.19e-30 | NR | MCK5506772.1 | 2814274 | g149673 | i0 | 48.3 | 1.00840336134454 | 120 | 58 | 99.2 | 2 | 354 | 1 | 115 | 232 | MCK5506772.1 PD-(D/E)XK nuclease family protein [Thermodesulfovibrionia bacterium] | diamond | 360 | 120 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Thermodesulfovibrionia | Thermodesulfovibrionia bacterium | |||||
| 26729831 | 26729831 | PRJNA556992_P_NODE_23661_length_700_cov_2.878788_g21656_i0 | PRJNA556992 | 23661 | 700 | 2.878788 | 20.151516 | Thermodesulfovibrio sp. | 2067987 | Bacteria | Bacteria | 47.8 | 0.0169 | NR | MCS7163610.1 | 2067987 | g21656 | i0 | 29.3 | 0.497142857142857 | 116 | 74 | 47.6 | 2 | 452 | 120 | 96 | 208 | MCS7163610.1 hypothetical protein [Thermodesulfovibrio sp.] | diamond | 348 | 47.8 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Thermodesulfovibrionia | Thermodesulfovibrionales | Thermodesulfovibrionaceae | Thermodesulfovibrio | Thermodesulfovibrio sp. | ||
| 26730085 | 26730085 | PRJNA556992_P_NODE_696641_length_251_cov_2.387640_g694452_i0 | PRJNA556992 | 696641 | 251 | 2.38764 | 5.9929764 | Nitrospira sp. ST-bin4 | 1978764 | Bacteria | Bacteria | 157 | 1.05e-45 | NR | OQW65566.1 | 1978764 | g694452 | i0 | 98.8 | 0.99203187250996006 | 83 | 1 | 99.2 | 0 | 1 | 249 | 99 | 181 | OQW65566.1 MAG: hypothetical protein BVN28_01400 [Nitrospira sp. ST-bin4] | diamond | 249 | 157 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. ST-bin4 | ||
| 26776561 | 26776561 | PRJNA556992_P_NODE_312001_length_287_cov_1.630841_g309812_i0 | PRJNA556992 | 312001 | 287 | 1.630841 | 4.68051367 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 66.6 | 2.44e-10 | NR | MBF0517148.1 | 2026887 | g309812 | i0 | 63.3 | 2.04878048780488 | 49 | 18 | 51.2 | 0 | 173 | 27 | 4 | 52 | MBF0517148.1 DUF262 domain-containing protein [Nitrospirota bacterium] | diamond | 588 | 66.6 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 26793851 | 26793851 | PRJNA556992_P_NODE_600641_length_259_cov_1.360215_g598452_i0 | PRJNA556992 | 600641 | 259 | 1.360215 | 3.52295685 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 44.7 | 0.00929 | NR | MBI4837758.1 | 2026887 | g598452 | i0 | 36.1 | 0.833976833976834 | 72 | 43 | 79.9 | 1 | 47 | 253 | 145 | 216 | MBI4837758.1 PD40 domain-containing protein [Nitrospirota bacterium] | diamond | 216 | 44.7 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 26871708 | 26871708 | PRJNA556992_P_NODE_1145561_length_202_cov_6.837209_g1143370_i0 | PRJNA556992 | 1145561 | 202 | 6.837209 | 13.81116218 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 48.5 | 1.91e-4 | NR | WP_014448389.1 | 180 | g1143370 | i0 | 75.9 | 2.95544554455446 | 29 | 7 | 43.1 | 0 | 36 | 122 | 455 | 483 | WP_014448389.1 phytoene desaturase family protein [Leptospirillum ferrooxidans] | diamond | 597 | 48.5 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Leptospirillum | Leptospirillum ferrooxidans | ||
| 26888995 | 26888995 | PRJNA556992_P_NODE_627641_length_256_cov_5.344262_g625452_i0 | PRJNA556992 | 627641 | 256 | 5.344262 | 13.68131072 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 155 | 5.059999999999998e-42 | NR | MDH5193002.1 | 70125 | g625452 | i0 | 90.6 | 3.984375 | 85 | 8 | 99.6 | 0 | 256 | 2 | 263 | 347 | MDH5193002.1 asparagine synthase (glutamine-hydrolyzing) [Nitrospira sp.] | diamond | 1020 | 155 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 26966309 | 26966309 | PRJNA556992_P_NODE_793722_length_246_cov_2.265896_g791532_i0 | PRJNA556992 | 793722 | 246 | 2.265896 | 5.57410416 | Nitrospira | 1234 | Bacteria | Bacteria | 171 | 1.16e-51 | NR | WP_140393865.1 | 96242 | g791532 | i0 | 96.3 | 1.97560975609756 | 81 | 3 | 98.8 | 0 | 2 | 244 | 86 | 166 | WP_140393865.1 zinc ribbon domain-containing protein [Nitrospira cf. moscoviensis SBR1015] | diamond | 486 | 171 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira cf. moscoviensis SBR1015 | ||
| 26983476 | 26983476 | PRJNA556992_P_NODE_318002_length_286_cov_2.046948_g315813_i0 | PRJNA556992 | 318002 | 286 | 2.046948 | 5.85427128 | Nitrospirales bacterium | 2358460 | Bacteria | Bacteria | 47.8 | 9.09e-4 | NR | GJL51723.1 | 2358460 | g315813 | i0 | 39.2 | 0.534965034965035 | 51 | 29 | 53.5 | 1 | 155 | 3 | 173 | 221 | GJL51723.1 MAG: peptidase M52 [Nitrospirales bacterium] | diamond | 153 | 47.8 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospirales bacterium | ||||
| 26983589 | 26983589 | PRJNA556992_P_NODE_522742_length_265_cov_2.348958_g520553_i0 | PRJNA556992 | 522742 | 265 | 2.348958 | 6.2247387 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 167 | 1.3499999999999999e-48 | NR | UVT18222.1 | 70125 | g520553 | i0 | 93.2 | 2.98867924528302 | 88 | 6 | 99.6 | 0 | 2 | 265 | 172 | 259 | UVT18222.1 MAG: tyrosine-type recombinase/integrase [Nitrospira sp.] | diamond | 792 | 167 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 27046734 | 27046734 | PRJNA556992_P_NODE_107622_length_396_cov_2.860681_g105438_i0 | PRJNA556992 | 107622 | 396 | 2.860681 | 11.32829676 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 97.4 | 5.96e-21 | NR | HNG00804.1 | 70125 | g105438 | i0 | 37.7 | 0.984848484848485 | 130 | 81 | 98.5 | 0 | 3 | 392 | 103 | 232 | HNG00804.1 hypothetical protein [Nitrospira sp.] | diamond | 390 | 97.4 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 27109912 | 27109912 | PRJNA556992_P_NODE_407862_length_276_cov_1.266010_g405673_i0 | PRJNA556992 | 407862 | 276 | 1.26601 | 3.4941876 | Nitrospiraceae bacterium | 2026770 | Bacteria | Bacteria | 108 | 5.43e-25 | NR | MBX9658446.1 | 2026770 | g405673 | i0 | 63.5 | 0.923913043478261 | 85 | 28 | 90.2 | 2 | 251 | 3 | 7 | 90 | MBX9658446.1 hypothetical protein [Nitrospiraceae bacterium] | diamond | 255 | 108 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospiraceae bacterium | |||
| 27141300 | 27141300 | PRJNA556992_P_NODE_283702_length_292_cov_1.821918_g281513_i0 | PRJNA556992 | 283702 | 292 | 1.821918 | 5.32000056 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 79.7 | 6.46e-15 | NR | MBI4653621.1 | 2026887 | g281513 | i0 | 43.8 | 2.87671232876712 | 96 | 46 | 98.6 | 2 | 290 | 3 | 165 | 252 | MBI4653621.1 elongation factor 4 [Nitrospirota bacterium] | diamond | 840 | 79.7 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 27250829 | 27250829 | PRJNA556992_P_NODE_1015703_length_229_cov_2.384615_g1013513_i0 | PRJNA556992 | 1015703 | 229 | 2.384615 | 5.46076835 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 141 | 6.9e-37 | NR | MBX3326394.1 | 70125 | g1013513 | i0 | 88.2 | 3.9825327510917 | 76 | 9 | 99.6 | 0 | 2 | 229 | 86 | 161 | MBX3326394.1 DUF2309 family protein [Nitrospira sp.] | diamond | 912 | 142 | 0.992957746478873 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 27250917 | 27250917 | PRJNA556992_P_NODE_918843_length_239_cov_2.343373_g916653_i0 | PRJNA556992 | 918843 | 239 | 2.343373 | 5.60066147 | Nitrospira | 1234 | Bacteria | Bacteria | 117 | 5.4399999999999995e-30 | NR | MEX5219925.1 | 70125 | g916653 | i0 | 69.6 | 1.98326359832636 | 79 | 24 | 99.2 | 0 | 1 | 237 | 208 | 286 | MEX5219925.1 pirin family protein [Nitrospira sp.] | diamond | 474 | 117 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 27282606 | 27282606 | PRJNA556992_P_NODE_319543_length_286_cov_1.446009_g317354_i0 | PRJNA556992 | 319543 | 286 | 1.446009 | 4.13558574 | Nitrospira | 1234 | Bacteria | Bacteria | 204 | 2.89e-60 | NR | MBH0190538.1 | 70125 | g317354 | i0 | 96.8 | 1.99300699300699 | 95 | 3 | 99.7 | 0 | 286 | 2 | 22 | 116 | MBH0190538.1 4-alpha-glucanotransferase [Nitrospira sp.] | diamond | 570 | 205 | 0.995121951219512 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 27299752 | 27299752 | PRJNA556992_P_NODE_267403_length_297_cov_4.267857_g265214_i0 | PRJNA556992 | 267403 | 297 | 4.267857 | 12.67553529 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 162 | 5.25e-46 | NR | MDN5942855.1 | 70125 | g265214 | i0 | 75.8 | 1 | 99 | 24 | 100 | 0 | 1 | 297 | 50 | 148 | MDN5942855.1 restriction endonuclease subunit S [Nitrospira sp.] | diamond | 297 | 162 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 27299817 | 27299817 | PRJNA556992_P_NODE_413063_length_275_cov_2.227723_g410874_i0 | PRJNA556992 | 413063 | 275 | 2.227723 | 6.12623825 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 94 | 2.8000000000000004e-22 | NR | MDH4186782.1 | 70125 | g410874 | i0 | 53.8 | 0.992727272727273 | 91 | 41 | 99.3 | 1 | 2 | 274 | 27 | 116 | MDH4186782.1 hypothetical protein [Nitrospira sp.] | diamond | 273 | 94 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 27395037 | 27395037 | PRJNA556992_P_NODE_920923_length_238_cov_6.703030_g918733_i0 | PRJNA556992 | 920923 | 238 | 6.70303 | 15.9532114 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 144 | 4.4299999999999997e-38 | NR | NOT96740.1 | 70125 | g918733 | i0 | 92.3 | 0.983193277310924 | 78 | 6 | 98.3 | 0 | 236 | 3 | 82 | 159 | NOT96740.1 efflux RND transporter periplasmic adaptor subunit [Nitrospira sp.] | diamond | 234 | 144 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 27426407 | 27426407 | PRJNA556992_P_NODE_436543_length_273_cov_1.540000_g434354_i0 | PRJNA556992 | 436543 | 273 | 1.54 | 4.2042 | Nitrospiraceae bacterium | 2026770 | Bacteria | Bacteria | 179 | 6.969999999999998e-54 | NR | MBX9659828.1 | 2026770 | g434354 | i0 | 100 | 2.96703296703297 | 91 | 0 | 100 | 0 | 1 | 273 | 80 | 170 | MBX9659828.1 RNase adapter RapZ [Nitrospiraceae bacterium] | diamond | 810 | 179 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospiraceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;