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contig_metadata

21 rows where bioproject = "PRJNA556992" and tax_phylum = "Fidelibacterota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 21 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA556992 · 21 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23474680 23474680 PRJNA556992_P_NODE_1037979_length_226_cov_5.464052_g1035789_i0 PRJNA556992 1037979 226 5.464052 12.34875752 Fidelibacter multiformis 3377529 Bacteria Bacteria 60.2 1.2e-4   NTclustered gi|2752026413|dbj|AP035449.1| 3377529 g1035789 i0 97.143 0.415929203539823 35 1 15 0 128 162 2412191 2412157 Candidatus Neomarinimicrobiota bacterium IA91 DNA, complete genome blastn 94 60.2 1 Bacteria FCB group Pseudomonadati Fidelibacterota Fidelibacteria Fidelibacterales Fidelibacteraceae Fidelibacter Fidelibacter multiformis
23479877 23479877 PRJNA556992_P_NODE_3439_length_1679_cov_14.495019_g2788_i0 PRJNA556992 3439 1679 14.495019 243.37136901 root 1 Root_unresolved Root_unresolved 265 4.19e-80   NR MBT5355595.1 2026760 g2788 i0 55.1 0.923764145324598 274 88 43.8 8 89 823 1 268 MBT5355595.1 hypothetical protein [Fidelibacterota bacterium] diamond 1551 266 0.996240601503759 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
27078676 27078676 PRJNA556992_P_NODE_72182_length_449_cov_3.571809_g70007_i0 PRJNA556992 72182 449 3.571809 16.03742241 Fidelibacterota bacterium 2026760 Bacteria Bacteria 88.2 8.4e-18   NR RKY54725.1 2026760 g70007 i0 40.5 2.35857461024499 111 66 74.2 0 357 25 3 113 RKY54725.1 MAG: hypothetical protein DRP93_04820 [Fidelibacterota bacterium] diamond 1059 88.2 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
27426274 27426274 PRJNA556992_P_NODE_150403_length_358_cov_1.891228_g148215_i0 PRJNA556992 150403 358 1.891228 6.77059624 Fidelibacterota bacterium 2026760 Bacteria Bacteria 76.6 1.55e-13   NR MCK4446859.1 2026760 g148215 i0 39.4 1.64245810055866 109 63 88.8 1 38 355 31 139 MCK4446859.1 IS1 family transposase [Fidelibacterota bacterium] diamond 588 76.6 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
27552512 27552512 PRJNA556992_P_NODE_972564_length_233_cov_3.787500_g970374_i0 PRJNA556992 972564 233 3.7875 8.824875 Fidelibacterota bacterium 2026760 Bacteria Bacteria 77.4 2.03e-14   NR MEL1226873.1 2026760 g970374 i0 47.9 0.939914163090129 73 37 94 1 221 3 222 293 MEL1226873.1 hypothetical protein [Fidelibacterota bacterium] diamond 219 77.4 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
27963109 27963109 PRJNA556992_P_NODE_797865_length_246_cov_1.520231_g795675_i0 PRJNA556992 797865 246 1.520231 3.73976826 Fidelibacterota bacterium 2026760 Bacteria Bacteria 52.8 1.1e-5   NR MFL2989267.1 2026760 g795675 i0 31.3 7.0609756097561 83 55 98.8 1 3 245 287 369 MFL2989267.1 chlorophyllase/cutinase-like alpha/beta fold protein [Fidelibacterota bacterium] diamond 1737 52.8 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
28071881 28071881 PRJNA556992_P_NODE_1168745_length_197_cov_6.330645_g1166554_i0 PRJNA556992 1168745 197 6.330645 12.47137065 Bacteria 2 Bacteria Bacteria 51.6 4.13e-7   NR MCD6101063.1 2026760 g1166554 i0 69 1.7817258883248701 29 9 44.2 0 197 111 4 32 MCD6101063.1 hypothetical protein [Fidelibacterota bacterium] diamond 351 51.6 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
28987912 28987912 PRJNA556992_P_NODE_979328_length_232_cov_6.283019_g977138_i0 PRJNA556992 979328 232 6.283019 14.57660408 Bacteria 2 Bacteria Bacteria 50.8 3.98e-5   NR MFQ6618342.1 2026760 g977138 i0 53.3 4.13793103448276 45 21 58.2 0 137 3 61 105 MFQ6618342.1 peptide chain release factor N(5)-glutamine methyltransferase [Fidelibacterota bacterium] diamond 960 51.2 0.9921875 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
29889403 29889403 PRJNA556992_P_NODE_969451_length_233_cov_6.787500_g967261_i0 PRJNA556992 969451 233 6.7875 15.814875 Fidelibacterota bacterium 2026760 Bacteria Bacteria 89 4.68e-19   NR MCK4903464.1 2026760 g967261 i0 53.9 1.85407725321888 76 34 97.9 1 2 229 105 179 MCK4903464.1 methionyl-tRNA formyltransferase [Fidelibacterota bacterium] diamond 432 89 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
29903399 29903399 PRJNA556992_P_NODE_1071891_length_219_cov_6.143836_g1069700_i0 PRJNA556992 1071891 219 6.143836 13.45500084 Pseudomonadati 3379134 Bacteria Bacteria 46.2 0.0016   NR UCH61648.1 2026760 g1069700 i0 53.7 1.13698630136986 41 19 56.2 0 130 8 147 187 UCH61648.1 MAG: hypothetical protein JSU77_07455 [Fidelibacterota bacterium] diamond 249 46.2 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
30015709 30015709 PRJNA556992_P_NODE_921471_length_238_cov_5.660606_g919281_i0 PRJNA556992 921471 238 5.660606 13.47224228 Fidelibacterota bacterium 2026760 Bacteria Bacteria 61.2 1.18e-9   NR MBT7823173.1 2026760 g919281 i0 47.3 1.46218487394958 55 29 69.3 0 238 74 78 132 MBT7823173.1 hypothetical protein [Fidelibacterota bacterium] diamond 348 61.2 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
30078534 30078534 PRJNA556992_P_NODE_732412_length_249_cov_3.210227_g730223_i0 PRJNA556992 732412 249 3.210227 7.99346523 Fidelibacterota bacterium 2026760 Bacteria Bacteria 56.2 4.25e-8   NR MDP6339011.1 2026760 g730223 i0 49.2 1.42168674698795 59 30 71.1 0 1 177 31 89 MDP6339011.1 chorismate mutase [Fidelibacterota bacterium] diamond 354 56.2 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
30124277 30124277 PRJNA556992_P_NODE_790112_length_246_cov_3.242775_g787922_i0 PRJNA556992 790112 246 3.242775 7.9772265000000004 root 1 Root_unresolved Root_unresolved 50.4 7.29e-5   NR MBT7424051.1 2026760 g787922 i0 34.9 2.52439024390244 83 52 98.8 1 245 3 398 480 MBT7424051.1 hypothetical protein [Fidelibacterota bacterium] diamond 621 50.8 0.992125984251969 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
30268628 30268628 PRJNA556992_P_NODE_849932_length_243_cov_2.576471_g847742_i0 PRJNA556992 849932 243 2.576471 6.26082453 Fidelibacterota bacterium 2026760 Bacteria Bacteria 118 8.21e-29   NR MCF7837428.1 2026760 g847742 i0 76.3 0.987654320987654 80 19 98.8 0 1 240 658 737 MCF7837428.1 Eco57I restriction-modification methylase domain-containing protein [Fidelibacterota bacterium] diamond 240 118 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
30457824 30457824 PRJNA556992_P_NODE_1040933_length_226_cov_3.614379_g1038743_i0 PRJNA556992 1040933 226 3.614379 8.16849654 Fidelibacterota bacterium 2026760 Bacteria Bacteria 42.7 0.0295   NR MDD5583230.1 2026760 g1038743 i0 37 1.43362831858407 54 31 67.7 1 51 203 350 403 MDD5583230.1 CRISPR-associated helicase Cas3' [Fidelibacterota bacterium] diamond 324 42.7 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
31215599 31215599 PRJNA556992_P_NODE_537775_length_264_cov_1.612565_g535586_i0 PRJNA556992 537775 264 1.612565 4.2571716 Fidelibacterota bacterium 2026760 Bacteria Bacteria 42.4 0.0321   NR MFO7841894.1 2026760 g535586 i0 48.7 0.875 39 20 44.3 0 144 260 44 82 MFO7841894.1 thioredoxin family protein [Fidelibacterota bacterium] diamond 231 42.4 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
31262035 31262035 PRJNA556992_P_NODE_871855_length_242_cov_1.940828_g869665_i0 PRJNA556992 871855 242 1.940828 4.69680376 FCB group 1783270 Bacteria Bacteria 49.3 1.82e-4   NR MAJ33069.1 2026760 g869665 i0 32.1 8.59090909090909 84 44 99.2 2 240 1 638 712 MAJ33069.1 hypothetical protein [Fidelibacterota bacterium] diamond 2079 49.7 0.991951710261569 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
31279286 31279286 PRJNA556992_P_NODE_790675_length_246_cov_3.063584_g788485_i0 PRJNA556992 790675 246 3.063584 7.53641664 Fidelibacterota bacterium 2026760 Bacteria Bacteria 110 3.39e-26   NR MDB4125994.1 2026760 g788485 i0 59.3 21.7073170731707 81 33 98.8 0 245 3 86 166 MDB4125994.1 F0F1 ATP synthase subunit alpha [Fidelibacterota bacterium] diamond 5340 110 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
31690073 31690073 PRJNA556992_P_NODE_1016277_length_229_cov_2.211538_g1014087_i0 PRJNA556992 1016277 229 2.211538 5.06442202 Fidelibacterota bacterium 2026760 Bacteria Bacteria 102 2.61e-24   NR MEE9572350.1 2026760 g1014087 i0 62.2 1.95196506550218 74 28 96.9 0 6 227 135 208 MEE9572350.1 GDP-L-fucose synthase [Fidelibacterota bacterium] diamond 447 102 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
32386658 32386658 PRJNA556992_P_NODE_81659_length_431_cov_9.226257_g79478_i0 PRJNA556992 81659 431 9.226257 39.76516767 Fidelibacterota bacterium 2026760 Bacteria Bacteria 48.5 0.00246   NR MCH8068104.1 2026760 g79478 i0 34.1 0.633410672853828 91 59 62.6 1 332 63 363 453 MCH8068104.1 hypothetical protein [Fidelibacterota bacterium] diamond 273 48.5 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
32765044 32765044 PRJNA556992_P_NODE_371540_length_279_cov_7.000000_g369351_i0 PRJNA556992 371540 279 7 19.53 Fidelibacter multiformis 3377529 Bacteria Bacteria 156 7.22e-46   NR WP_400166656.1 3377529 g369351 i0 81.3 2.95698924731183 91 17 97.8 0 274 2 23 113 WP_400166656.1 response regulator transcription factor [Fidelibacter multiformis] diamond 825 156 1 Bacteria FCB group Pseudomonadati Fidelibacterota Fidelibacteria Fidelibacterales Fidelibacteraceae Fidelibacter Fidelibacter multiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;