RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA556992" and tax_phylum = "Candidatus Walliibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Walliibacteriota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA556992 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27868346 27868346 PRJNA556992_P_NODE_940565_length_236_cov_6.263804_g938375_i0 PRJNA556992 940565 236 6.263804 14.78257744 Candidatus Wallbacteria bacterium 2053640 Bacteria Bacteria 46.2 0.00181   NR MBI3890355.1 2053640 g938375 i0 50 0.559322033898305 44 19 54.7 2 107 235 209 250 MBI3890355.1 ATP-binding cassette domain-containing protein [Candidatus Wallbacteria bacterium] diamond 132 46.2 1 Bacteria Bacteria candidate phyla   Candidatus Walliibacteriota         Candidatus Wallbacteria bacterium
29825864 29825864 PRJNA556992_P_NODE_850811_length_243_cov_2.388235_g848621_i0 PRJNA556992 850811 243 2.388235 5.80341105 Candidatus Wallbacteria bacterium 2053640 Bacteria Bacteria 66.6 1.32e-10   NR MEZ7892925.1 2053640 g848621 i0 50.9 1.4320987654321 57 28 70.4 0 241 71 345 401 MEZ7892925.1 glycosyltransferase [Candidatus Wallbacteria bacterium] diamond 348 66.6 1 Bacteria Bacteria candidate phyla   Candidatus Walliibacteriota         Candidatus Wallbacteria bacterium
30173174 30173174 PRJNA556992_P_NODE_347972_length_282_cov_2.559809_g345783_i0 PRJNA556992 347972 282 2.559809 7.21866138 Candidatus Wallbacteria bacterium 2053640 Bacteria Bacteria 54.7 3.84e-6   NR MBI4867239.1 2053640 g345783 i0 39.4 1 94 49 92.6 4 7 267 679 771 MBI4867239.1 hypothetical protein [Candidatus Wallbacteria bacterium] diamond 282 54.7 1 Bacteria Bacteria candidate phyla   Candidatus Walliibacteriota         Candidatus Wallbacteria bacterium
30331798 30331798 PRJNA556992_P_NODE_403152_length_276_cov_2.221675_g400963_i0 PRJNA556992 403152 276 2.221675 6.131823 Candidatus Wallbacteria bacterium 2053640 Bacteria Bacteria 57.4 3.88e-7   NR MBI4869235.1 2053640 g400963 i0 35.6 0.978260869565217 90 55 97.8 1 276 7 147 233 MBI4869235.1 hypothetical protein [Candidatus Wallbacteria bacterium] diamond 270 57.4 1 Bacteria Bacteria candidate phyla   Candidatus Walliibacteriota         Candidatus Wallbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;