RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA556992" and tax_phylum = "Candidatus Poribacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Poribacteria · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA556992 · 7 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27962881 27962881 PRJNA556992_P_NODE_335945_length_284_cov_1.308057_g333756_i0 PRJNA556992 335945 284 1.308057 3.71488188 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 155 1.2e-42   NR MAE20606.1 2026781 g333756 i0 79.1 0.961267605633803 91 19 96.1 0 2 274 400 490 MAE20606.1 hypothetical protein [Candidatus Poribacteria bacterium] diamond 273 155 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
31230149 31230149 PRJNA556992_P_NODE_359395_length_281_cov_1.480769_g357206_i0 PRJNA556992 359395 281 1.480769 4.16096089 Bacillati 1783272 Bacteria Bacteria 52 2.74e-5   NR MDA1192106.1 2026781 g357206 i0 70.6 1.66548042704626 34 9 35.2 1 3 101 247 280 MDA1192106.1 semialdehyde dehydrogenase [Candidatus Poribacteria bacterium] diamond 468 52 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
31342774 31342774 PRJNA556992_P_NODE_901276_length_240_cov_8.317365_g899086_i0 PRJNA556992 901276 240 8.317365 19.961676 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 57.4 2.42e-7   NR MCE2402334.1 2026781 g899086 i0 45.2 2.3375 62 25 66.3 1 75 233 559 620 MCE2402334.1 hypothetical protein [Candidatus Poribacteria bacterium] diamond 561 57.4 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
31532546 31532546 PRJNA556992_P_NODE_644536_length_255_cov_2.686813_g642347_i0 PRJNA556992 644536 255 2.686813 6.85137315 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 53.9 4.97e-6   NR MDE0401338.1 2026781 g642347 i0 51.1 1.10588235294118 47 23 55.3 0 254 114 886 932 MDE0401338.1 sigma-70 family RNA polymerase sigma factor [Candidatus Poribacteria bacterium] diamond 282 53.9 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
31785024 31785024 PRJNA556992_P_NODE_24477_length_689_cov_11.129870_g22461_i0 PRJNA556992 24477 689 11.12987 76.6848043 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 228 4.5099999999999995e-72   NR MAE20555.1 2026781 g22461 i0 59.6 0.905660377358491 208 82 90.6 1 662 39 1 206 MAE20555.1 hypothetical protein [Candidatus Poribacteria bacterium] diamond 624 228 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
31975169 31975169 PRJNA556992_P_NODE_57138_length_488_cov_1.079518_g54971_i0 PRJNA556992 57138 488 1.079518 5.26804784 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 67 5.53e-10   NR MAE20567.1 2026781 g54971 i0 30.8 0.879098360655738 143 95 87.9 2 1 429 87 225 MAE20567.1 hypothetical protein [Candidatus Poribacteria bacterium] diamond 429 67 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
32196909 32196909 PRJNA556992_P_NODE_901058_length_240_cov_10.802395_g898868_i0 PRJNA556992 901058 240 10.802395 25.925748 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 103 1.4499999999999998e-23   NR MBT3268333.1 2026781 g898868 i0 67.1 1.975 79 26 98.8 0 1 237 219 297 MBT3268333.1 bifunctional YncE family protein/alkaline phosphatase family protein [Candidatus Poribacteria bacterium] diamond 474 103 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;