RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA556992" and tax_phylum = "Candidatus Margulisiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Margulisiibacteriota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA556992 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28878687 28878687 PRJNA556992_P_NODE_880908_length_242_cov_0.911243_g878718_i0 PRJNA556992 880908 242 0.911243 2.20520806 Candidatus Margulisiibacteriota bacterium 2053573 Bacteria Bacteria 56.2 2.6e-7   NR MFA5876015.1 2053573 g878718 i0 52.8 0.65702479338843 53 25 65.7 0 161 3 1 53 MFA5876015.1 hypothetical protein [Candidatus Margulisiibacteriota bacterium] diamond 159 56.2 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Margulisiibacteriota         Candidatus Margulisiibacteriota bacterium
29099923 29099923 PRJNA556992_P_NODE_876268_length_242_cov_0.911243_g874078_i0 PRJNA556992 876268 242 0.911243 2.20520806 Candidatus Margulisiibacteriota bacterium 2053573 Bacteria Bacteria 104 5.1899999999999996e-24   NR MEA3494255.1 2053573 g874078 i0 56.3 0.991735537190083 80 35 99.2 0 3 242 379 458 MEA3494255.1 tyrosine-type recombinase/integrase [Candidatus Margulisiibacteriota bacterium] diamond 240 104 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Margulisiibacteriota         Candidatus Margulisiibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;