RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA556992" and tax_phylum = "Candidatus Lithacetigenota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Lithacetigenota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA556992 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30678649 30678649 PRJNA556992_P_NODE_410593_length_275_cov_3.529703_g408404_i0 PRJNA556992 410593 275 3.529703 9.70668325 Candidatus Psychracetigena formicireducens 2986056 Bacteria Bacteria 155 3.2999999999999998e-43   NR MBT9131440.1 2986056 g408404 i0 79.1 0.992727272727273 91 19 99.3 0 3 275 191 281 MBT9131440.1 ATP-dependent zinc metalloprotease FtsH [Candidatus Psychracetigena formicireducens] diamond 273 155 1 Bacteria   Bacillati Candidatus Lithacetigenota       Candidatus Psychracetigena Candidatus Psychracetigena formicireducens
31658701 31658701 PRJNA556992_P_NODE_679237_length_252_cov_4.111732_g677048_i0 PRJNA556992 679237 252 4.111732 10.36156464 Candidatus Psychracetigena formicireducens 2986056 Bacteria Bacteria 102 1.3399999999999999e-25   NR MBT9131427.1 2986056 g677048 i0 71.4 0.75 63 18 75 0 251 63 74 136 MBT9131427.1 hypothetical protein [Candidatus Psychracetigena formicireducens] diamond 189 102 1 Bacteria   Bacillati Candidatus Lithacetigenota       Candidatus Psychracetigena Candidatus Psychracetigena formicireducens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;