RNAquarium Metadata Server
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contig_metadata

10 rows where bioproject = "PRJNA556992" and tax_phylum = "Candidatus Hydrogenedentota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 10 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA556992 · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
527986 527986 PRJNA556992_P_NODE_382021_length_278_cov_3.326829_g379832_i0 PRJNA556992 382021 278 3.326829 9.24858462 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 351 2.25e-92   NTclustered gi|2621786419|emb|OY782877.1| 2030809 g379832 i0 92.063 209.838129496403 252 16 90 4 1 250 2443980 2444229 MAG: Candidatus Hydrogenedentes bacterium isolate 28e603e2-5466-4732-bb1a-a7370d5bccbd genome assembly, chromosome: 1 blastn 58335 351 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
27314252 27314252 PRJNA556992_P_NODE_1037023_length_226_cov_7.000000_g1034833_i0 PRJNA556992 1037023 226 7 15.82 FCB group 1783270 Bacteria Bacteria 97.4 1.7100000000000003e-21   NR MDZ4858872.1 2030809 g1034833 i0 67.2 1.83185840707965 64 21 85 0 223 32 106 169 MDZ4858872.1 VIT and VWA domain-containing protein [Candidatus Hydrogenedentota bacterium] diamond 414 97.4 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
27363376 27363376 PRJNA556992_P_NODE_600203_length_259_cov_1.430108_g598014_i0 PRJNA556992 600203 259 1.430108 3.70397972 Candidatus Hydrogenedens sp. 2654184 Bacteria Bacteria 67.8 3.87e-12   NR MBI1321181.1 2654184 g598014 i0 51.9 1.83011583011583 81 38 92.7 1 17 256 38 118 MBI1321181.1 hypothetical protein [Candidatus Hydrogenedens sp.] diamond 474 67.8 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota Candidatus Hydrogenedentia Candidatus Hydrogenedentales Candidatus Hydrogenedentaceae Candidatus Hydrogenedens Candidatus Hydrogenedens sp.
27552389 27552389 PRJNA556992_P_NODE_723324_length_250_cov_0.870056_g721135_i0 PRJNA556992 723324 250 0.870056 2.17514 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 72 1.95e-12   NR GMV91227.1 2030809 g721135 i0 56.7 2.232 67 29 80.4 0 203 3 947 1013 GMV91227.1 MAG: hypothetical protein AMXMBFR82_10050 [Candidatus Hydrogenedentota bacterium] diamond 558 72 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
28341786 28341786 PRJNA556992_P_NODE_335346_length_284_cov_1.402844_g333157_i0 PRJNA556992 335346 284 1.402844 3.98407696 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 47.4 9.53e-4   NR MCL4217933.1 2030809 g333157 i0 34.3 0.73943661971831 70 46 73.9 0 238 29 81 150 MCL4217933.1 sodium:solute symporter [Candidatus Hydrogenedentota bacterium] diamond 210 47.4 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
28499766 28499766 PRJNA556992_P_NODE_326547_length_285_cov_1.650943_g324358_i0 PRJNA556992 326547 285 1.650943 4.70518755 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 65.1 7.82e-10   NR HPO15893.1 2030809 g324358 i0 59.2 1.58947368421053 49 20 51.6 0 5 151 354 402 HPO15893.1 Tm-1-like ATP-binding domain-containing protein [Candidatus Hydrogenedentota bacterium] diamond 453 65.1 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
29289230 29289230 PRJNA556992_P_NODE_954749_length_235_cov_3.135802_g952559_i0 PRJNA556992 954749 235 3.135802 7.3691347 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 150 5.01e-43   NR MBL7648364.1 2030809 g952559 i0 93.6 0.995744680851064 78 5 99.6 0 2 235 73 150 MBL7648364.1 tyrosine recombinase XerD [Candidatus Hydrogenedentota bacterium] diamond 234 150 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
30868111 30868111 PRJNA556992_P_NODE_1093414_length_214_cov_5.531915_g1091223_i0 PRJNA556992 1093414 214 5.531915 11.8382981 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 97.4 3.27e-22   NR MFM1920496.1 2030809 g1091223 i0 68.9 0.855140186915888 61 19 85.5 0 200 18 89 149 MFM1920496.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 183 97.4 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
31183865 31183865 PRJNA556992_P_NODE_1074315_length_219_cov_4.136986_g1072124_i0 PRJNA556992 1074315 219 4.136986 9.05999934 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 73.6 3.84e-13   NR MCD6287661.1 2030809 g1072124 i0 47.8 2.6986301369863 69 36 94.5 0 13 219 451 519 MCD6287661.1 flagellar biosynthesis protein FlhA [Candidatus Hydrogenedentota bacterium] diamond 591 73.6 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
32069765 32069765 PRJNA556992_P_NODE_1032118_length_227_cov_3.227273_g1029928_i0 PRJNA556992 1032118 227 3.227273 7.32590971 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 44.7 0.00635   NR MCC6490993.1 2030809 g1029928 i0 41.8 0.885462555066079 67 39 88.5 0 3 203 339 405 MCC6490993.1 MCP four helix bundle domain-containing protein [Candidatus Hydrogenedentota bacterium] diamond 201 44.7 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;