RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA556992" and tax_phylum = "Candidatus Falkowiibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Falkowiibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA556992 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4349658 4349658 PRJNA556992_P_NODE_1058984_length_222_cov_7.449664_g1056794_i0 PRJNA556992 1058984 222 7.449664 16.53825408 Candidatus Falkowbacteria bacterium 2053554 Bacteria Bacteria 68.6 4.6e-12   NR MCX6795693.1 2053554 g1056794 i0 71.8 0.527027027027027 39 11 52.7 0 220 104 26 64 MCX6795693.1 Kazal-type serine protease inhibitor domain-containing protein [Candidatus Falkowbacteria bacterium] diamond 117 68.6 1 Bacteria Bacteria candidate phyla   Candidatus Falkowiibacteriota         Candidatus Falkowbacteria bacterium
10730778 10730778 PRJNA556992_P_NODE_280029_length_293_cov_1.713636_g277840_i0 PRJNA556992 280029 293 1.713636 5.02095348 Candidatus Falkowbacteria bacterium 2053554 Bacteria Bacteria 320 6.75e-83   NTclustered gi|1950824677|gb|CP066698.1| 2053554 g277840 i0 86.395 8.80546075085324 294 38 99 2 1 292 655350 655643 MAG: Candidatus Falkowbacteria bacterium isolate NC_groundwater_1683_Pr3_B-0.1um_40_26 chromosome blastn 2580 320 1 Bacteria Bacteria candidate phyla   Candidatus Falkowiibacteriota         Candidatus Falkowbacteria bacterium
14559365 14559365 PRJNA556992_P_NODE_57292_length_487_cov_3.659420_g55125_i0 PRJNA556992 57292 487 3.65942 17.8213754 Candidatus Falkowbacteria bacterium 2053554 Bacteria Bacteria 198 5.76e-46   NTclustered gi|2801818892|emb|OZ173682.1| 2053554 g55125 i0 82.96 34.864476386037 223 34 45 4 1 220 767289 767068 Candidatus Falkowbacteria bacterium isolate Fred.cMAG.1 genome assembly, chromosome: 1 blastn 16979 198 1 Bacteria Bacteria candidate phyla   Candidatus Falkowiibacteriota         Candidatus Falkowbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;