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contig_metadata

29 rows where bioproject = "PRJNA556992" and tax_kingdom = "Shotokuvirae"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Shotokuvirae · 29 ✖

bioproject 1

  • PRJNA556992 · 29 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
525381 525381 PRJNA556992_P_NODE_204521_length_324_cov_17.725100_g202333_i0 PRJNA556992 204521 324 17.7251 57.429324 Genomoviridae sp. 2202565 Viruses Viruses 573 5.249999999999999e-159   NTclustered gi|2756421318|gb|PP744651.1| 2202565 g202333 i0 98.758 60.7561728395062 322 4 99 0 2 323 1937 1616 MAG: Genomoviridae sp. isolate 171_3642 genomic sequence blastn 19685 573 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae   Genomoviridae sp.
3073391 3073391 PRJNA556992_P_NODE_1056883_length_223_cov_4.746667_g1054693_i0 PRJNA556992 1056883 223 4.746667 10.58506741 Cressdnaviricota sp. 2748378 Viruses Viruses 52.8 0.02   NTclustered gi|2896101054|gb|PQ792386.1| 2748378 g1054693 i0 100 0.125560538116592 28 0 13 0 43 70 1198 1171 MAG: Cressdnaviricota sp. isolate Splant072_cress9 genomic sequence blastn 28 52.8 1 Viruses   Shotokuvirae Cressdnaviricota         Cressdnaviricota sp.
3074088 3074088 PRJNA556992_P_NODE_1113083_length_209_cov_11.522059_g1110892_i0 PRJNA556992 1113083 209 11.522059 24.08110331 Genomoviridae sp. 2202565 Viruses Viruses 387 4.42e-103   NTclustered gi|2756421318|gb|PP744651.1| 2202565 g1110892 i0 100 3.97607655502392 209 0 100 0 1 209 1266 1058 MAG: Genomoviridae sp. isolate 171_3642 genomic sequence blastn 831 387 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae   Genomoviridae sp.
4350022 4350022 PRJNA556992_P_NODE_1087004_length_216_cov_4.097902_g1084813_i0 PRJNA556992 1087004 216 4.097902 8.85146832 Gammapapillomavirus 8 1175850 Viruses Viruses 372 1.29e-98   NTclustered gi|343411609|gb|HM999999.1| 1070420 g1084813 i0 97.685 1 216 5 100 0 1 216 3666 3451 Human papillomavirus type 147 isolate GH659, complete genome blastn 216 372 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Gammapapillomavirus Gammapapillomavirus 8
4354503 4354503 PRJNA556992_P_NODE_329244_length_285_cov_1.132075_g327055_i0 PRJNA556992 329244 285 1.132075 3.22641375 Alphapapillomavirus 2 337039 Viruses Viruses 510 3.61e-140   NTclustered gi|58430757|dbj|AB201226.1| 260717 g327055 i0 98.947 12.4771929824561 285 3 100 0 1 285 2295 2011 Human papillomavirus type 94 DNA, nearly complete genome, Korean variant blastn 3556 510 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 2
8177518 8177518 PRJNA556992_P_NODE_159927_length_351_cov_2.766187_g157739_i0 PRJNA556992 159927 351 2.766187 9.70931637 Genomoviridae sp. 2202565 Viruses Viruses 599 9.45e-167   NTclustered gi|2756421315|gb|PP744650.1| 2202565 g157739 i0 97.199 3557.74358974359 357 4 100 1 1 351 1374 1730 MAG: Genomoviridae sp. isolate 171_106887 genomic sequence blastn 1248768 599 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae   Genomoviridae sp.
10737229 10737229 PRJNA556992_P_NODE_788169_length_246_cov_4.208092_g785979_i0 PRJNA556992 788169 246 4.208092 10.35190632 Betapapillomavirus 2 333924 Viruses Viruses 433 6.79e-117   NTclustered gi|1273499042|gb|MF588683.1| 333924 g785979 i0 98.374 2 246 4 100 0 1 246 4744 4499 Betapapillomavirus 2 isolate Beta02_m292c88, complete genome blastn 492 433 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Betapapillomavirus Betapapillomavirus 2
10739652 10739652 PRJNA556992_P_NODE_988529_length_231_cov_7.462025_g986339_i0 PRJNA556992 988529 231 7.462025 17.23727775 Genomoviridae sp. 2202565 Viruses Viruses 427 2.9399999999999998e-115   NTclustered gi|2756421460|gb|PP744699.1| 2202565 g986339 i0 100 54.6969696969697 231 0 100 0 1 231 1774 2004 MAG: Genomoviridae sp. isolate 321_31078 genomic sequence blastn 12635 427 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae   Genomoviridae sp.
12006821 12006821 PRJNA556992_P_NODE_374410_length_279_cov_2.398058_g372221_i0 PRJNA556992 374410 279 2.398058 6.69058182 Betapapillomavirus 1 337051 Viruses Viruses 503 5.9e-138   NTclustered gi|1273498994|gb|MF588677.1| 337051 g372221 i0 99.281 2.89964157706093 278 2 99 0 1 278 5312 5589 Betapapillomavirus 1 isolate Beta01_HIVGc36, complete genome blastn 809 503 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Betapapillomavirus Betapapillomavirus 1
13276522 13276522 PRJNA556992_P_NODE_10551_length_1023_cov_21.089474_g9067_i0 PRJNA556992 10551 1023 21.089474 215.74531902 Genomoviridae sp. 2202565 Viruses Viruses 1410 0   NTclustered gi|2756421285|gb|PP744640.1| 2202565 g9067 i0 100 49.6080156402737 763 0 100 0 261 1023 2200 1438 MAG: Genomoviridae sp. isolate 128_116004 genomic sequence blastn 50749 1410 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae   Genomoviridae sp.
13281126 13281126 PRJNA556992_P_NODE_315051_length_286_cov_8.319249_g312862_i0 PRJNA556992 315051 286 8.319249 23.79305214 Genomoviridae sp. 2202565 Viruses Viruses 501 2.18e-137   NTclustered gi|2742830632|gb|PP793069.1| 2202565 g312862 i0 98.252 2 286 5 100 0 1 286 409 124 MAG: Genomoviridae sp. isolate 028_4104, partial genome blastn 572 501 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae   Genomoviridae sp.
13287639 13287639 PRJNA556992_P_NODE_829451_length_244_cov_2.883041_g827261_i0 PRJNA556992 829451 244 2.883041 7.03462004 Betapapillomavirus 1 337051 Viruses Viruses 56.5 0.002   NTclustered gi|1200175664|gb|KY969593.1| 31547 g827261 i0 100 0.245901639344262 30 0 12 0 23 52 5585 5556 Human papillomavirus 20 strain HPV-20/Lancaster/2015, complete genome blastn 60 56.5 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Betapapillomavirus Betapapillomavirus 1
13879512 13879512 PRJNA556992_P_NODE_24511_length_689_cov_4.285714_g22495_i0 PRJNA556992 24511 689 4.285714 29.52856946 Genomoviridae 1910928 Viruses Viruses 1251 0   NTclustered gi|2080100107|gb|MZ244272.1| 1983771 g22495 i0 99.419 31.088534107402 689 4 100 0 1 689 1732 1044 MAG: Gemycircularvirus sp. isolate 336genomoc1, complete genome blastn 21420 1256 0.996019108280255 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae Gemycircularvirus Gemycircularvirus sp.
14554620 14554620 PRJNA556992_P_NODE_215952_length_318_cov_25.983673_g213764_i0 PRJNA556992 215952 318 25.983673 82.62808014 Genomoviridae sp. 2202565 Viruses Viruses 579 1.1099999999999996e-160   NTclustered gi|2756421318|gb|PP744651.1| 2202565 g213764 i0 99.684 3.90880503144654 316 1 99 0 1 316 690 1005 MAG: Genomoviridae sp. isolate 171_3642 genomic sequence blastn 1243 579 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae   Genomoviridae sp.
14557185 14557185 PRJNA556992_P_NODE_396712_length_277_cov_1.446078_g394523_i0 PRJNA556992 396712 277 1.446078 4.00563606 Blatella germanica densoviruses-like virus 1 2776787 Viruses Viruses 490 4.56e-134   NTclustered gi|1917254128|gb|MN851295.1| 2776787 g394523 i0 98.556 30.8736462093863 277 4 100 0 1 277 131 407 Blatella germanica densoviruses-like virus 1 isolate EuB-PV1 nonstructural protein genes, complete cds blastn 8552 490 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Blatella germanica densoviruses-like virus 1
16429980 16429980 PRJNA556992_P_NODE_71033_length_451_cov_20.973545_g68858_i0 PRJNA556992 71033 451 20.973545 94.59068795 Gemykibivirus 1941236 Viruses Viruses 811 0   NTclustered gi|745699253|gb|KP133078.1| 1588761 g68858 i0 99.113 31.9866962305987 451 4 100 0 1 451 1076 1526 Gemycircularvirus BZ1, complete genome blastn 14426 811 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae Gemykibivirus Gemykibivirus humas2
17100823 17100823 PRJNA556992_P_NODE_1115214_length_209_cov_5.375000_g1113023_i0 PRJNA556992 1115214 209 5.375 11.23375 Genomoviridae sp. 2202565 Viruses Viruses 237 4.71e-58   NTclustered gi|2756421318|gb|PP744651.1| 2202565 g1113023 i0 96.503 2.22488038277512 143 5 100 0 1 143 143 1 MAG: Genomoviridae sp. isolate 171_3642 genomic sequence blastn 465 237 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae   Genomoviridae sp.
17108764 17108764 PRJNA556992_P_NODE_627454_length_256_cov_5.693989_g625265_i0 PRJNA556992 627454 256 5.693989 14.57661184 Genomoviridae sp. 2202565 Viruses Viruses 468 1.95e-127   NTclustered gi|2756421460|gb|PP744699.1| 2202565 g625265 i0 99.609 7.80859375 256 1 100 0 1 256 1347 1092 MAG: Genomoviridae sp. isolate 321_31078 genomic sequence blastn 1999 468 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae   Genomoviridae sp.
18385995 18385995 PRJNA556992_P_NODE_870755_length_242_cov_2.254438_g868565_i0 PRJNA556992 870755 242 2.254438 5.45573996 Epsilonpolyomavirus bovis 1891754 Viruses Viruses 58.4 4.69e-4   NTclustered gi|954182136|gb|KU170643.1| 1561702 g868565 i0 100 0.128099173553719 31 0 13 0 115 145 138 108 Bovine polyomavirus 1 isolate #7535, complete genome blastn 31 58.4 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Epsilonpolyomavirus Epsilonpolyomavirus bovis
19654700 19654700 PRJNA556992_P_NODE_40976_length_554_cov_2.871102_g38831_i0 PRJNA556992 40976 554 2.871102 15.90590508 Parvoviridae sp. 1940570 Viruses Viruses 304 5.090000000000001e-100   NR XNT21172.1 1940570 g38831 i0 76.6 3.985559566787 184 43 99.6 0 553 2 70 253 XNT21172.1 MAG: replication protein [Parvoviridae sp.] diamond 2208 304 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvoviridae sp.
20251234 20251234 PRJNA556992_P_NODE_1135396_length_204_cov_14.389313_g1133205_i0 PRJNA556992 1135396 204 14.389313 29.35419852 Arfiviricetes 2732423 Viruses Viruses 377 2.59e-100   NTclustered gi|2626080284|gb|OR270688.1| 1954248 g1133205 i0 100 6 204 0 100 0 1 204 1029 826 MAG: Circoviridae sp. isolate GL83, complete genome blastn 1224 377 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Rohanvirales Nenyaviridae Galvornvirus Galvornvirus isengard
22204461 22204461 PRJNA556992_P_NODE_33478_length_601_cov_4.880682_g31362_i0 PRJNA556992 33478 601 4.880682 29.33289882 Psittaciform aveparvovirus 3042447 Viruses Viruses 300 1.69e-98   NR XNT21000.1 3042447 g31362 i0 70.5 1.99667221297837 200 57 99.8 1 2 601 52 249 XNT21000.1 MAG: replication protein [Parvoviridae sp.] diamond 1200 300 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Psittaciform aveparvovirus
22803839 22803839 PRJNA556992_P_NODE_552918_length_262_cov_23.047619_g550729_i0 PRJNA556992 552918 262 23.047619 60.38476178 Gemykibivirus 1941236 Viruses Viruses 483 7.149999999999997e-132   NTclustered gi|745699259|gb|KP133080.1| 1588763 g550729 i0 100 31.706106870229 261 0 99 0 1 261 118 378 Gemycircularvirus NP, complete genome blastn 8307 483 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae Gemykibivirus Gemykibivirus humas2
24761283 24761283 PRJNA556992_P_NODE_949240_length_235_cov_11.969136_g947050_i0 PRJNA556992 949240 235 11.969136 28.1274696 Genomoviridae sp. 2202565 Viruses Viruses 435 1.79e-117   NTclustered gi|2756421460|gb|PP744699.1| 2202565 g947050 i0 100 37.1446808510638 235 0 100 0 1 235 1547 1781 MAG: Genomoviridae sp. isolate 321_31078 genomic sequence blastn 8729 435 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae   Genomoviridae sp.
27204628 27204628 PRJNA556992_P_NODE_277422_length_294_cov_1.393665_g275233_i0 PRJNA556992 277422 294 1.393665 4.0973751 parvo-like hybrid virus 3367306 Viruses Viruses 108 3.18e-25   NR XHS97069.1 3367306 g275233 i0 60.7 0.857142857142857 84 33 85.7 0 1 252 9 92 XHS97069.1 capsid protein [parvo-like hybrid virus] diamond 252 108 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   parvo-like hybrid virus
27710922 27710922 PRJNA556992_P_NODE_72584_length_448_cov_4.661333_g70408_i0 PRJNA556992 72584 448 4.661333 20.88277184 Phoenicopteridae parvo-like hybrid virus 2794528 Viruses Viruses 63.2 2.29e-8   NR QTE03745.1 2794528 g70408 i0 32.9 0.9375 140 70 90.4 3 413 9 144 264 QTE03745.1 MAG: hypothetical protein [Phoenicopteridae parvo-like hybrid virus] diamond 420 63.2 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Phoenicopteridae parvo-like hybrid virus
28878309 28878309 PRJNA556992_P_NODE_171788_length_343_cov_4.340741_g169600_i0 PRJNA556992 171788 343 4.340741 14.88874163 Parvoviridae sp. 1940570 Viruses Viruses 107 9.499999999999999e-25   NR QKE54869.1 1940570 g169600 i0 53.9 0.778425655976676 89 40 77 1 315 52 262 350 QKE54869.1 MAG: capsid protein [Parvoviridae sp.] diamond 267 107 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvoviridae sp.
29162869 29162869 PRJNA556992_P_NODE_173069_length_343_cov_0.855556_g170881_i0 PRJNA556992 173069 343 0.855556 2.93455708 Parvoviridae sp. 1940570 Viruses Viruses 190 9.13e-57   NR QKE54887.1 1940570 g170881 i0 80.7 5.98250728862974 114 22 99.7 0 342 1 281 394 QKE54887.1 MAG: replication protein [Parvoviridae sp.] diamond 2052 190 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvoviridae sp.
30805018 30805018 PRJNA556992_P_NODE_1062934_length_221_cov_7.635135_g1060744_i0 PRJNA556992 1062934 221 7.635135 16.87364835 Ambidensovirus sp. 2050976 Viruses Viruses 55.5 8.99e-7   NR AWV66974.1 2050976 g1060744 i0 58.7 1.289592760181 46 17 62.4 1 216 79 116 159 AWV66974.1 Structural ORF, partial [Ambidensovirus sp.] diamond 285 55.5 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Protoambidensovirus Protoambidensovirus incertum3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;