RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

239 rows where bioproject = "PRJNA556992", tax_clade = "core chlorophytes" and tax_kingdom = "Viridiplantae"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Viridiplantae · 239 ✖

tax_clade 1

  • core chlorophytes · 239 ✖

bioproject 1

  • PRJNA556992 · 239 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
531776 531776 PRJNA556992_P_NODE_689761_length_251_cov_10.488764_g687572_i0 PRJNA556992 689761 251 10.488764 26.32679764 root 1 Root_unresolved Root_unresolved 115 1.2799999999999999e-28   NR YP_009720869.1 3190 g687572 i0 71.2 8.67729083665339 73 21 87.3 0 246 28 322 394 YP_009720869.1 NADH dehydrogenase subunit 7 [Scherffelia dubia] diamond 2178 116 0.991379310344828 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorodendrophyceae Chlorodendrales Chlorodendraceae Scherffelia Scherffelia dubia
533900 533900 PRJNA556992_P_NODE_862261_length_242_cov_10.710059_g860071_i0 PRJNA556992 862261 242 10.710059 25.91834278 Chlamydomonas reinhardtii 3055 Plants Plants 219 2.0299999999999993e-52   NTclustered gi|2082268533|ref|XM_001695875.2| 3055 g860071 i0 88.398 9.01652892561983 181 21 75 0 59 239 193 373 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_16g673650v5), mRNA blastn 2182 219 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
534125 534125 PRJNA556992_P_NODE_880961_length_242_cov_0.911243_g878771_i0 PRJNA556992 880961 242 0.911243 2.20520806 Chloroidium ellipsoideum 63676 Plants Plants 235 2.02e-57   NTclustered gi|1169296931|gb|KY364701.1| 63676 g878771 i0 86.036 11.995867768595 222 27 91 4 23 242 5663 5444 Chloroidium ellipsoideum 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 2903 235 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Chloroidium Chloroidium ellipsoideum
1798825 1798825 PRJNA556992_P_NODE_1109422_length_210_cov_7.306569_g1107231_i0 PRJNA556992 1109422 210 7.306569 15.3437949 Lobosphaera incisa 312850 Plants Plants 388 1.24e-103   NTclustered gi|821316988|ref|NC_027060.1| 312850 g1107231 i0 100 5.97142857142857 210 0 100 0 1 210 15435 15226 Lobosphaera incisa strain SAG 2468 mitochondrion, complete genome blastn 1254 388 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Lobosphaera Lobosphaera incisa
1800643 1800643 PRJNA556992_P_NODE_175802_length_341_cov_1.951493_g173614_i0 PRJNA556992 175802 341 1.951493 6.65459113 Bracteacoccus minor 50037 Plants Plants 619 7.039999999999999e-173   NTclustered gi|1008861662|ref|NC_029674.1| 50037 g173614 i0 99.413 160.66275659824 341 2 100 0 1 341 2874 2534 Bracteacoccus minor strain UTEX 66 chloroplast, complete genome blastn 54786 619 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Bracteacoccaceae Bracteacoccus Bracteacoccus minor
1807477 1807477 PRJNA556992_P_NODE_694822_length_251_cov_2.887640_g692633_i0 PRJNA556992 694822 251 2.88764 7.2479764 Monoraphidium neglectum 145388 Plants Plants 58.4 4.89e-4   NTclustered gi|926785469|ref|XM_014045755.1| 145388 g692633 i0 100 0.123505976095618 31 0 12 0 211 241 1889 1859 Monoraphidium neglectum hypothetical protein mRNA blastn 31 58.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
1810231 1810231 PRJNA556992_P_NODE_910742_length_239_cov_9.861446_g908552_i0 PRJNA556992 910742 239 9.861446 23.56885594 Chlamydomonas reinhardtii 3055 Plants Plants 257 4.24e-64   NTclustered gi|2082256114|ref|XM_001702538.2| 3055 g908552 i0 89.604 76.0376569037657 202 21 85 0 38 239 940 739 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_10g422600v5), mRNA blastn 18173 257 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
2403444 2403444 PRJNA556992_P_NODE_938022_length_237_cov_2.420732_g935832_i0 PRJNA556992 938022 237 2.420732 5.73713484 Chlorophyceae 3166 Plants Plants 438 1.4e-118   NTclustered gi|359385314|emb|FR865731.1| 3088 g935832 i0 100 100 237 0 100 0 1 237 110 346 Scenedesmus obliquus genomic DNA containing 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2, 28S rRNA gene, culture collection CCAP 276/52 blastn 23700 438 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
3086259 3086259 PRJNA556992_P_NODE_969283_length_233_cov_7.275000_g967093_i0 PRJNA556992 969283 233 7.275 16.95075 Chlamydomonas sp. TK-1983 3056 Plants Plants 158 4.3e-34   NTclustered gi|174203|gb|K02345.1|CRERRA 3056 g967093 i0 90.678 0.506437768240343 118 11 51 0 84 201 118 1 Chlamydomonas sp. TK-1983 5S ribosomal RNA gene, complete sequence blastn 118 158 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas sp. TK-1983
4350193 4350193 PRJNA556992_P_NODE_1100124_length_212_cov_11.676259_g1097933_i0 PRJNA556992 1100124 212 11.676259 24.75366908 Chlamydomonas reinhardtii 3055 Plants Plants 220 4.83e-53   NTclustered gi|2082248373|ref|XM_001695415.2| 3055 g1097933 i0 85.581 13.3160377358491 215 25 100 5 1 212 815 604 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g284250v5), mRNA blastn 2823 220 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
4354778 4354778 PRJNA556992_P_NODE_348504_length_282_cov_2.272727_g346315_i0 PRJNA556992 348504 282 2.272727 6.40909014 Chlorella variabilis 554065 Plants Plants 243 1.44e-59   NTclustered gi|552815204|ref|XM_005844321.1| 554065 g346315 i0 84.553 1.33687943262411 246 36 87 2 16 260 989 745 Chlorella variabilis hypothetical protein (CHLNCDRAFT_26946) mRNA, partial cds blastn 377 243 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
4355071 4355071 PRJNA556992_P_NODE_369464_length_280_cov_1.362319_g367275_i0 PRJNA556992 369464 280 1.362319 3.8144932 Chlamydomonas reinhardtii 3055 Plants Plants 394 3.72e-105   NTclustered gi|2082260397|ref|XM_043068042.1| 3055 g367275 i0 95.181 33.5785714285714 249 12 89 0 32 280 994 1242 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_12g498600v5), mRNA blastn 9402 394 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
4356019 4356019 PRJNA556992_P_NODE_439964_length_272_cov_7.321608_g437775_i0 PRJNA556992 439964 272 7.321608 19.91477376 Chlorella variabilis 554065 Plants Plants 296 1.04e-75   NTclustered gi|552809519|ref|XM_005842898.1| 554065 g437775 i0 87.072 6.54779411764706 263 32 96 2 2 263 459 720 Chlorella variabilis hypothetical protein (CHLNCDRAFT_59830) mRNA, complete cds blastn 1781 296 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
5627038 5627038 PRJNA556992_P_NODE_1108345_length_211_cov_3.224638_g1106154_i0 PRJNA556992 1108345 211 3.224638 6.80398618 Chlamydomonas reinhardtii 3055 Plants Plants 183 6.3e-42   NTclustered gi|2082268984|ref|XM_001698794.2| 3055 g1106154 i0 95.614 4.75355450236967 114 5 100 0 1 114 1026 1139 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_16g690431v5), mRNA blastn 1003 183 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
5631878 5631878 PRJNA556992_P_NODE_380545_length_278_cov_8.473171_g378356_i0 PRJNA556992 380545 278 8.473171 23.55541538 Chlamydomonadales 3042 Plants Plants 116 1.12e-30   NR PNH03148.1 47790 g378356 i0 77.3 4.26258992805755 75 17 80.9 0 225 1 1 75 PNH03148.1 60S ribosomal protein L17-1 [Tetrabaena socialis] diamond 1185 117 0.991452991452991 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Tetrabaenaceae Tetrabaena Tetrabaena socialis
5638087 5638087 PRJNA556992_P_NODE_881605_length_241_cov_13.172619_g879415_i0 PRJNA556992 881605 241 13.172619 31.74601179 Monoraphidium neglectum 145388 Plants Plants 165 2.67e-36   NTclustered gi|926794282|ref|XM_014050161.1| 145388 g879415 i0 86.755 0.62655601659751 151 16 62 4 83 231 100 248 Monoraphidium neglectum Chlorophyll a-b binding protein mRNA blastn 151 165 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
5638551 5638551 PRJNA556992_P_NODE_920105_length_238_cov_19.484848_g917915_i0 PRJNA556992 920105 238 19.484848 46.37393824 Chlamydomonas reinhardtii 3055 Plants Plants 230 9.199999999999998e-56   NTclustered gi|2082260551|ref|XM_001702928.2| 3055 g917915 i0 84.716 67 229 35 96 0 1 229 93 321 Chlamydomonas reinhardtii ribosomal protein S11 (CHLRE_12g514500v5), mRNA blastn 15946 230 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
6899894 6899894 PRJNA556992_P_NODE_1017046_length_228_cov_9.503226_g1014856_i0 PRJNA556992 1017046 228 9.503226 21.66735528 Chlamydomonas reinhardtii 3055 Plants Plants 296 8.5e-76   NTclustered gi|19069738|emb|AJ277281.2| 3055 g1014856 i0 90.351 11.7938596491228 228 19 99 3 3 228 835 609 Chlamydomonas reinhardtii mRNA for chloroplast NADP-malate dehydrogenase (NADP-mdh gene) blastn 2689 296 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
6901184 6901184 PRJNA556992_P_NODE_1114726_length_209_cov_5.889706_g1112535_i0 PRJNA556992 1114726 209 5.889706 12.30948554 Pediastrum duplex 3105 Plants Plants 257 3.6200000000000005e-64   NTclustered gi|21040380|gb|AF183479.2| 3105 g1112535 i0 88.995 30.9234449760766 209 21 99 2 1 208 3254 3047 Pediastrum duplex strain UTEX LB 1364 28S ribosomal RNA gene, partial sequence blastn 6463 257 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Hydrodictyaceae Pediastrum Pediastrum duplex
6908110 6908110 PRJNA556992_P_NODE_556206_length_262_cov_3.126984_g554017_i0 PRJNA556992 556206 262 3.126984 8.19269808 Haematococcus lacustris 44745 Plants Plants 109 1.82e-25   NR KAJ9505384.1 44745 g554017 i0 85.1 1.53435114503817 67 10 76.7 0 261 61 888 954 KAJ9505384.1 hypothetical protein QJQ45_024133 [Haematococcus lacustris] diamond 402 109 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
6909135 6909135 PRJNA556992_P_NODE_639346_length_255_cov_10.653846_g637157_i0 PRJNA556992 639346 255 10.653846 27.1673073 Dunaliella viridis 140095 Plants Plants 139 1.7299999999999999e-28   NTclustered gi|83271026|gb|DQ301766.1| 140095 g637157 i0 88.696 21.956862745098 115 11 45 2 142 255 122 235 Dunaliella viridis chloroplast glyceraldehyde-3-phosphate dehydrogenase (GapA1) mRNA, complete cds; nuclear gene for chloroplast product blastn 5599 139 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella viridis
7505156 7505156 PRJNA556992_P_NODE_664426_length_253_cov_9.694444_g662237_i0 PRJNA556992 664426 253 9.694444 24.52694332 Chlamydomonas 3052 Plants Plants 211 3.58e-50   NTclustered gi|238534981|gb|GQ176399.1| 3055 g662237 i0 84.507 10.6561264822134 213 33 84 0 13 225 339 127 Chlamydomonas reinhardtii clone CNB22 molecular marker mRNA sequence blastn 2696 211 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
8175115 8175115 PRJNA556992_P_NODE_1046427_length_225_cov_13.427632_g1044237_i0 PRJNA556992 1046427 225 13.427632 30.212172 Coccomyxa subellipsoidea 248742 Plants Plants 189 1.4599999999999998e-43   NTclustered gi|545363365|ref|XM_005646756.1| 574566 g1044237 i0 82.432 6.57777777777778 222 33 97 6 1 219 897 1115 Coccomyxa subellipsoidea C-169 ribosomal protein L3 component of cytosolic 80S ribosome and 60S large subunit mRNA blastn 1480 189 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
8175133 8175133 PRJNA556992_P_NODE_1048027_length_225_cov_5.618421_g1045837_i0 PRJNA556992 1048027 225 5.618421 12.64144725 Chlamydomonas incerta 51695 Plants Plants 187 5.26e-43   NTclustered gi|87313222|gb|DQ370096.1| 51695 g1045837 i0 83.092 66.0311111111111 207 33 92 2 7 212 349 554 Chlamydomonas incerta strain SAG 7.73 light-harvesting chlorophyll-a/b binding protein Lhca6 mRNA, partial cds blastn 14857 187 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas incerta
8175166 8175166 PRJNA556992_P_NODE_1050967_length_224_cov_7.417219_g1048777_i0 PRJNA556992 1050967 224 7.417219 16.61457056 Chlorella variabilis 554065 Plants Plants 135 1.92e-27   NTclustered gi|552845587|ref|XM_005851329.1| 554065 g1048777 i0 87.826 20.84375 115 14 51 0 77 191 1044 1158 Chlorella variabilis hypothetical protein (CHLNCDRAFT_48457) mRNA, complete cds blastn 4669 135 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
8179465 8179465 PRJNA556992_P_NODE_287327_length_291_cov_1.935780_g285138_i0 PRJNA556992 287327 291 1.93578 5.6331198 Coelastrella saipanensis 152631 Plants Plants 477 3.75e-130   NTclustered gi|1642520538|ref|NC_042181.1| 152631 g285138 i0 96.54 142.670103092784 289 9 99 1 1 289 110370 110657 Coelastrella saipanensis chloroplast, complete genome blastn 41517 477 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Coelastrella Coelastrella saipanensis
8186147 8186147 PRJNA556992_P_NODE_805727_length_245_cov_5.720930_g803537_i0 PRJNA556992 805727 245 5.72093 14.0162785 Chlamydomonas reinhardtii 3055 Plants Plants 76.8 1.31e-9   NTclustered gi|2082250862|ref|XM_001700028.2| 3055 g803537 i0 100 0.16734693877551 41 0 17 0 1 41 2447 2487 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_07g338000v5), mRNA blastn 41 76.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
8187934 8187934 PRJNA556992_P_NODE_947047_length_236_cov_2.539877_g944857_i0 PRJNA556992 947047 236 2.539877 5.99410972 Chlamydomonas reinhardtii 3055 Plants Plants 58.4 4.55e-4   NTclustered gi|2082246876|ref|XM_043062738.1| 3055 g944857 i0 97.059 1.27966101694915 34 1 14 0 89 122 2815 2782 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g258200v5), mRNA blastn 302 58.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
9450964 9450964 PRJNA556992_P_NODE_1062268_length_221_cov_14.108108_g1060078_i0 PRJNA556992 1062268 221 14.108108 31.17891868 Chlorella variabilis 554065 Plants Plants 267 6.43e-67   NTclustered gi|552815362|ref|XM_005844364.1| 554065 g1060078 i0 88.94 4.55656108597285 217 22 98 2 2 217 193 408 Chlorella variabilis hypothetical protein (CHLNCDRAFT_139122) mRNA, complete cds blastn 1007 267 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
9451040 9451040 PRJNA556992_P_NODE_1067128_length_220_cov_7.476190_g1064937_i0 PRJNA556992 1067128 220 7.47619 16.447618 Sanguina aurantia 2578422 Plants Plants 112 8.460000000000001e-27   NR MEW5298676.1 2578422 g1064937 i0 76.1 0.968181818181818 71 17 96.8 0 220 8 636 706 MEW5298676.1 hypothetical protein [Sanguina aurantia] diamond 213 112 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Sanguina Sanguina aurantia
9457505 9457505 PRJNA556992_P_NODE_461148_length_270_cov_13.675127_g458959_i0 PRJNA556992 461148 270 13.675127 36.9228429 Chlamydomonas incerta 51695 Plants Plants 313 1.03e-80   NTclustered gi|87313224|gb|DQ370097.1| 51695 g458959 i0 88.462 108.148148148148 260 28 96 2 1 259 141 399 Chlamydomonas incerta strain SAG 7.73 light-harvesting chlorophyll-a/b binding protein LhcbM1 mRNA, partial cds blastn 29200 313 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas incerta
9460305 9460305 PRJNA556992_P_NODE_689788_length_251_cov_9.915730_g687599_i0 PRJNA556992 689788 251 9.91573 24.8884823 Monoraphidium neglectum 145388 Plants Plants 159 1.3e-34   NTclustered gi|926792486|ref|XM_014049263.1| 145388 g687599 i0 91.379 15.6294820717131 116 10 46 0 132 247 71 186 Monoraphidium neglectum 60S ribosomal protein L37-3 mRNA blastn 3923 159 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
9460941 9460941 PRJNA556992_P_NODE_741108_length_249_cov_1.375000_g738919_i0 PRJNA556992 741108 249 1.375 3.42375 Coccomyxa subellipsoidea 248742 Plants Plants 200 7.61e-47   NTclustered gi|545372990|ref|XM_005650847.1| 574566 g738919 i0 98.246 0.457831325301205 114 2 46 0 136 249 1982 2095 Coccomyxa subellipsoidea C-169 hypothetical protein partial mRNA blastn 114 200 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
10726743 10726743 PRJNA556992_P_NODE_1066429_length_220_cov_13.142857_g1064238_i0 PRJNA556992 1066429 220 13.142857 28.9142854 Volvox africanus 51714 Plants Plants 137 3.67e-37   NR GIL46170.1 51714 g1064238 i0 82.2 2.98636363636364 73 13 99.5 0 2 220 212 284 GIL46170.1 hypothetical protein Vafri_3219 [Volvox africanus] diamond 657 137 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox africanus
10727146 10727146 PRJNA556992_P_NODE_1096029_length_213_cov_9.514286_g1093838_i0 PRJNA556992 1096029 213 9.514286 20.26542918 Chlamydomonas sp. UWO 241 1653778 Plants Plants 93.5 1.1e-14   NTclustered gi|822624806|gb|KP313859.1| 1653778 g1093838 i0 98.113 10.169014084507 53 1 25 0 2 54 6380 6432 Chlamydomonas sp. UWO 241 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 2166 93.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas sp. UWO 241
11327463 11327463 PRJNA556992_P_NODE_1050229_length_224_cov_14.145695_g1048039_i0 PRJNA556992 1050229 224 14.145695 31.6863568 Chlamydomonadales 3042 Plants Plants 60.2 1.19e-4   NTclustered gi|498823|emb|X79674.1| 3055 g1048039 i0 97.143 0.78125 35 1 16 0 189 223 582 548 C.reinhardtii PsaD mRNA blastn 175 60.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
11330381 11330381 PRJNA556992_P_NODE_713609_length_250_cov_3.062147_g711420_i0 PRJNA556992 713609 250 3.062147 7.6553675 Eukaryota 2759 Plants Plants 60.2 1.35e-4   NTclustered gi|1358957254|gb|AC276783.1| 3055 g711420 i0 88.235 6.668 51 4 20 2 113 162 36695 36646 Chlamydomonas reinhardtii clone VTP145-C14, complete sequence blastn 1667 60.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
12002335 12002335 PRJNA556992_P_NODE_1128630_length_206_cov_5.443609_g1126439_i0 PRJNA556992 1128630 206 5.443609 11.21383454 Tetrabaena socialis 47790 Plants Plants 118 6.529999999999998e-32   NR PNH09753.1 47790 g1126439 i0 80.3 5.75242718446602 66 13 96.1 0 200 3 33 98 PNH09753.1 60S ribosomal protein L21-1 [Tetrabaena socialis] diamond 1185 118 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Tetrabaenaceae Tetrabaena Tetrabaena socialis
12010147 12010147 PRJNA556992_P_NODE_640330_length_255_cov_5.203297_g638141_i0 PRJNA556992 640330 255 5.203297 13.26840735 Coccomyxa subellipsoidea 248742 Plants Plants 172 1.6999999999999996e-38   NTclustered gi|545364929|ref|XM_005647427.1| 574566 g638141 i0 83.158 21.3529411764706 190 30 74 2 2 190 475 663 Coccomyxa subellipsoidea C-169 ribosomal protein S6e mRNA blastn 5445 172 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
12010267 12010267 PRJNA556992_P_NODE_65070_length_465_cov_10.017857_g62898_i0 PRJNA556992 65070 465 10.017857 46.58303505 Chlamydomonas incerta 51695 Plants Plants 392 2.3399999999999998e-104   NTclustered gi|87313228|gb|DQ370099.1| 51695 g62898 i0 90.301 67.2838709677419 299 29 64 0 3 301 681 383 Chlamydomonas incerta strain SAG 7.73 light-harvesting chlorophyll-a/b binding protein LhcbM2b mRNA, partial cds blastn 31287 392 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas incerta
12010330 12010330 PRJNA556992_P_NODE_656070_length_254_cov_3.033149_g653881_i0 PRJNA556992 656070 254 3.033149 7.70419846 Auxenochlorella protothecoides 3075 Plants Plants 134 8.01e-27   NTclustered gi|760437336|ref|XM_011397435.1| 3075 g653881 i0 90.196 2.97637795275591 102 10 40 0 148 249 186 287 Auxenochlorella protothecoides Ribulose bisphosphate carboxylase small chain 7, chloroplastic partial mRNA blastn 756 134 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
12013786 12013786 PRJNA556992_P_NODE_929990_length_237_cov_12.969512_g927800_i0 PRJNA556992 929990 237 12.969512 30.73774344 Monoraphidium neglectum 145388 Plants Plants 126 1.24e-24   NTclustered gi|926778051|ref|XM_014042046.1| 145388 g927800 i0 80.982 1.37552742616034 163 27 68 4 1 161 245 85 Monoraphidium neglectum Photosystem I reaction center subunit XI mRNA blastn 326 126 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
12014489 12014489 PRJNA556992_P_NODE_987970_length_231_cov_13.500000_g985780_i0 PRJNA556992 987970 231 13.5 31.185 Chlamydomonas schloesseri 2026947 Plants Plants 69.7 9.9e-12   NR KAG2452130.1 2026947 g985780 i0 59.4 0.831168831168831 64 25 83.1 1 192 1 380 442 KAG2452130.1 hypothetical protein HYH02_003162 [Chlamydomonas schloesseri] diamond 192 69.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas schloesseri
12605521 12605521 PRJNA556992_P_NODE_511230_length_266_cov_2.248705_g509041_i0 PRJNA556992 511230 266 2.248705 5.9815553 Bracteacoccus 50036 Plants Plants 490 4.349999999999999e-134   NTclustered gi|1008861662|ref|NC_029674.1| 50037 g509041 i0 100 141.323308270677 265 0 99 0 1 265 3414 3150 Bracteacoccus minor strain UTEX 66 chloroplast, complete genome blastn 37592 490 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Bracteacoccaceae Bracteacoccus Bracteacoccus minor
12606571 12606571 PRJNA556992_P_NODE_823770_length_244_cov_10.029240_g821580_i0 PRJNA556992 823770 244 10.02924 24.4713456 Chlamydomonas 3052 Plants Plants 224 4.4099999999999997e-54   NTclustered gi|2082258449|ref|XM_043067443.1| 3055 g821580 i0 84.416 8.62295081967213 231 32 94 4 1 229 386 614 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_11g467689v5), mRNA blastn 2104 224 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
13276632 13276632 PRJNA556992_P_NODE_106371_length_397_cov_7.666667_g104187_i0 PRJNA556992 106371 397 7.666667 30.43666799 Chlamydomonas reinhardtii 3055 Plants Plants 52.8 0.038   NTclustered gi|2082271793|ref|XM_043072979.1| 3055 g104187 i0 100 0.0705289672544081 28 0 7 0 290 317 2361 2388 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_26g756947v5), mRNA blastn 28 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
13277612 13277612 PRJNA556992_P_NODE_1140051_length_203_cov_10.423077_g1137860_i0 PRJNA556992 1140051 203 10.423077 21.15884631 Chlamydomonas incerta 51695 Plants Plants 215 2.13e-51   NTclustered gi|74272714|gb|DQ122922.1| 51695 g1137860 i0 86.364 25.8128078817734 198 25 97 2 7 203 384 580 Chlamydomonas incerta mitochondrial ubiquinol-cytochrome c oxidoreductase (RisP) mRNA, partial cds; nuclear gene for mitochondrial product blastn 5240 215 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas incerta
13278718 13278718 PRJNA556992_P_NODE_159271_length_351_cov_11.787770_g157083_i0 PRJNA556992 159271 351 11.78777 41.3750727 Chlamydomonas reinhardtii 3055 Plants Plants 455 2.16e-123   NTclustered gi|2082256244|ref|XM_001702678.2| 3055 g157083 i0 90.462 5.76068376068376 346 31 98 2 4 348 892 548 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_10g425900v5), mRNA blastn 2022 455 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
13281339 13281339 PRJNA556992_P_NODE_330351_length_284_cov_4.715640_g328162_i0 PRJNA556992 330351 284 4.71564 13.3924176 Tetrabaena socialis 47790 Plants Plants 171 2.08e-48   NR PNH03158.1 47790 g328162 i0 81.9 1.99647887323944 94 17 99.3 0 3 284 390 483 PNH03158.1 6-phosphofructokinase 5, chloroplastic [Tetrabaena socialis] diamond 567 171 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Tetrabaenaceae Tetrabaena Tetrabaena socialis
13284890 13284890 PRJNA556992_P_NODE_607951_length_258_cov_2.405405_g605762_i0 PRJNA556992 607951 258 2.405405 6.2059449 Lobosphaera incisa 312850 Plants Plants 52.8 0.023   NTclustered gi|725650896|ref|NC_025533.1| 312850 g605762 i0 100 0.108527131782946 28 0 11 0 29 56 150430 150403 Lobosphaera incisa culture-collection SAG:2007 chloroplast, complete genome blastn 28 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Lobosphaera Lobosphaera incisa
13284985 13284985 PRJNA556992_P_NODE_616311_length_257_cov_4.141304_g614122_i0 PRJNA556992 616311 257 4.141304 10.64315128 Chlorosarcinopsis eremi 332213 Plants Plants 475 1.1699999999999999e-129   NTclustered gi|1432231416|gb|MH654823.1| 332213 g614122 i0 100 73.9066147859922 257 0 100 0 1 257 3371 3627 Chlorosarcinopsis eremi strain MKA.28 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 18994 475 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlorosarcinales Chlorosarcinaceae Chlorosarcinopsis Chlorosarcinopsis eremi
13288733 13288733 PRJNA556992_P_NODE_916051_length_239_cov_3.078313_g913861_i0 PRJNA556992 916051 239 3.078313 7.35716807 Haematococcus lacustris 44745 Plants Plants 267 7.049999999999999e-67   NTclustered gi|1279575454|gb|MF683078.1| 44745 g913861 i0 86.975 391.769874476987 238 29 99 2 1 237 2165 2401 Haematococcus lacustris 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast blastn 93633 267 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
13880677 13880677 PRJNA556992_P_NODE_565851_length_261_cov_5.010638_g563662_i0 PRJNA556992 565851 261 5.010638 13.07776518 Chlamydomonadales 3042 Plants Plants 303 5.95e-78   NTclustered gi|2082255880|ref|XM_001702589.2| 3055 g563662 i0 88.8 66.6551724137931 250 25 95 3 1 249 256 9 Chlamydomonas reinhardtii ribosomal protein L3 (CHLRE_10g417700v5), mRNA blastn 17397 303 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
14552481 14552481 PRJNA556992_P_NODE_1132752_length_205_cov_5.818182_g1130561_i0 PRJNA556992 1132752 205 5.818182 11.9272731 Auxenochlorella protothecoides 3075 Plants Plants 243 9.900000000000001e-60   NTclustered gi|760449678|ref|XM_011403606.1| 3075 g1130561 i0 88.235 98.3512195121951 204 22 99 2 1 203 1069 867 Auxenochlorella protothecoides Cell division control protein 48-like protein E partial mRNA blastn 20162 243 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
14557620 14557620 PRJNA556992_P_NODE_431232_length_273_cov_3.440000_g429043_i0 PRJNA556992 431232 273 3.44 9.3912 Micractinium conductrix 554055 Plants Plants 109 1.26e-25   NR PSC75187.1 554055 g429043 i0 56.7 0.989010989010989 90 39 98.9 0 272 3 129 218 PSC75187.1 peptidyl-prolyl cis-trans isomerase FKBP62-like [Micractinium conductrix] diamond 270 109 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Micractinium Micractinium conductrix
14560062 14560062 PRJNA556992_P_NODE_628732_length_256_cov_4.202186_g626543_i0 PRJNA556992 628732 256 4.202186 10.75759616 Tetrabaena socialis 47790 Plants Plants 98.6 5.889999999999999e-23   NR PNH08916.1 47790 g626543 i0 64.1 1.88671875 78 26 91.4 1 13 246 140 215 PNH08916.1 Chloride conductance regulatory protein ICln [Tetrabaena socialis] diamond 483 98.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Tetrabaenaceae Tetrabaena Tetrabaena socialis
14560176 14560176 PRJNA556992_P_NODE_639592_length_255_cov_7.357143_g637403_i0 PRJNA556992 639592 255 7.357143 18.76071465 Chlamydomonas reinhardtii 3055 Plants Plants 313 9.63e-81   NTclustered gi|2082254272|ref|XM_001694376.2| 3055 g637403 i0 88.933 74.7098039215686 253 28 99 0 1 253 530 278 Chlamydomonas reinhardtii ribosomal protein L10 (CHLRE_09g388200v5), mRNA blastn 19051 313 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
14560798 14560798 PRJNA556992_P_NODE_690012_length_251_cov_7.640449_g687823_i0 PRJNA556992 690012 251 7.640449 19.17752699 Chlamydomonas eustigma 1157962 Plants Plants 142 8.149999999999999e-40   NR GAX73492.1 1157962 g687823 i0 84.3 0.99203187250996006 83 13 99.2 0 2 250 117 199 GAX73492.1 hypothetical protein CEUSTIGMA_g944.t1 [Chlamydomonas eustigma] diamond 249 142 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma
14562440 14562440 PRJNA556992_P_NODE_82372_length_430_cov_4.386555_g80191_i0 PRJNA556992 82372 430 4.386555 18.8621865 Eukaryota 2759 Plants Plants 242 7.46e-76   NR KAI3423005.1 3077 g80191 i0 77.6 38.9023255813953 143 32 99.8 0 2 430 291 433 KAI3423005.1 hypothetical protein D9Q98_010848, partial [Chlorella vulgaris] diamond 16728 244 0.991803278688525 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
14563433 14563433 PRJNA556992_P_NODE_900912_length_240_cov_19.395210_g898722_i0 PRJNA556992 900912 240 19.39521 46.548504 Chlorella vulgaris 3077 Plants Plants 305 1.5e-78   NTclustered gi|1778222222|gb|MK948100.1| 3077 g898722 i0 91.228 9.22083333333333 228 14 93 4 18 239 62048 61821 Chlorella vulgaris strain NJ-7 plastid, complete genome blastn 2213 305 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
15152570 15152570 PRJNA556992_P_NODE_1087252_length_215_cov_16.781690_g1085061_i0 PRJNA556992 1087252 215 16.78169 36.0806335 root 1 Root_unresolved Root_unresolved 217 6.349999999999999e-52   NTclustered gi|926786067|ref|XM_014046054.1| 145388 g1085061 i0 85.047 10.8744186046512 214 30 99 2 3 215 59 271 Monoraphidium neglectum phosphoglycerate kinase mRNA blastn 2338 217 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
15828794 15828794 PRJNA556992_P_NODE_243053_length_308_cov_2.208511_g240865_i0 PRJNA556992 243053 308 2.208511 6.80221388 Desmochloris halophila 138176 Plants Plants 564 2.99e-156   NTclustered gi|371782086|emb|HE610118.1| 138176 g240865 i0 99.675 100.029220779221 308 1 100 0 1 308 2270 2577 Desmochloris halophila 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, strain UTEX 2073 blastn 30809 564 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Chlorocystidales Chlorocystidaceae Desmochloris Desmochloris halophila
15830932 15830932 PRJNA556992_P_NODE_389933_length_277_cov_6.151961_g387744_i0 PRJNA556992 389933 277 6.151961 17.04093197 Chlamydomonas reinhardtii 3055 Plants Plants 204 6.65e-48   NTclustered gi|2082260308|ref|XM_001690723.2| 3055 g387744 i0 81.323 4.09747292418773 257 42 92 6 23 276 599 852 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_12g500500v5), mRNA blastn 1135 204 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
15832624 15832624 PRJNA556992_P_NODE_526833_length_265_cov_1.531250_g524644_i0 PRJNA556992 526833 265 1.53125 4.0578125 Chlamydomonas reinhardtii 3055 Plants Plants 318 2.16e-82   NTclustered gi|2082248372|ref|XM_001695414.2| 3055 g524644 i0 88.39 68.5660377358491 267 27 100 4 1 265 451 715 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g284200v5), mRNA blastn 18170 318 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
15833095 15833095 PRJNA556992_P_NODE_565393_length_261_cov_6.021277_g563204_i0 PRJNA556992 565393 261 6.021277 15.71553297 Chlamydomonas incerta 51695 Plants Plants 211 3.71e-50   NTclustered gi|74272676|gb|DQ122903.1| 51695 g563204 i0 84.091 2.52107279693487 220 33 84 2 1 219 259 477 Chlamydomonas incerta mitochondrial NADH:ubiquinone oxidoreductase 13kD-like subunit mRNA, complete cds; nuclear gene for mitochondrial product blastn 658 211 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas incerta
15837020 15837020 PRJNA556992_P_NODE_882493_length_241_cov_6.154762_g880303_i0 PRJNA556992 882493 241 6.154762 14.83297642 Chlamydomonas reinhardtii 3055 Plants Plants 294 3.26e-75   NTclustered gi|2082268533|ref|XM_001695875.2| 3055 g880303 i0 89.316 51.2199170124481 234 25 97 0 3 236 666 899 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_16g673650v5), mRNA blastn 12344 294 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
16429236 16429236 PRJNA556992_P_NODE_494653_length_267_cov_7.618557_g492464_i0 PRJNA556992 494653 267 7.618557 20.34154719 Eukaryota 2759 Plants Plants 76.8 1.45e-9   NTclustered gi|397081|emb|X68905.1| 28455 g492464 i0 88.06 7.20224719101124 67 5 24 3 4 68 507 442 Chloroplast Chlamydomonas frankii rrnL gene, exon 1 blastn 1923 76.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas frankii
16429605 16429605 PRJNA556992_P_NODE_599193_length_259_cov_1.618280_g597004_i0 PRJNA556992 599193 259 1.61828 4.1913452 Chlorophyta 3041 Plants Plants 359 1.24e-94   NTclustered gi|1808706838|gb|MH511722.1| 47786 g597004 i0 92.126 96.0965250965251 254 20 98 0 1 254 6463 6210 Pandorina colemaniae large subunit of Rubisco (rbcL), photosystem II reaction center protein D1 (psbA), photosystem II protein I (psbI), ATP synthase CF1 alpha subunit (atpA), alpha subunit of RNA polymerase (rpoA), ribosomal protein S2 (rps2), ribosomal protein S18 (rps18), and hypothetical chloroplast RF3 (ycf3) genes, complete cds; plastid blastn 24889 359 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Pandorina Pandorina colemaniae
17104295 17104295 PRJNA556992_P_NODE_280774_length_292_cov_10.885845_g278585_i0 PRJNA556992 280774 292 10.885845 31.7866674 Chlamydomonas reinhardtii 3055 Plants Plants 244 4.1599999999999996e-60   NTclustered gi|18191|emb|X15164.1| 3055 g278585 i0 81.944 4.05821917808219 288 52 99 0 3 290 408 121 C.reinhardhii psaH mRNA for 11 kD subunit of photosystem I (polypeptide 28) blastn 1185 244 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
17104428 17104428 PRJNA556992_P_NODE_289334_length_290_cov_3.875576_g287145_i0 PRJNA556992 289334 290 3.875576 11.2391704 Monoraphidium neglectum 145388 Plants Plants 154 8.41e-45   NR XP_013901054.1 145388 g287145 i0 75 5.91724137931034 96 24 99.3 0 1 288 15 110 XP_013901054.1 isopentenyl-diphosphate delta-isomerase [Monoraphidium neglectum] diamond 1716 154 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
17105462 17105462 PRJNA556992_P_NODE_363694_length_280_cov_3.695652_g361505_i0 PRJNA556992 363694 280 3.695652 10.3478256 Monoraphidium neglectum 145388 Plants Plants 122 1.94e-23   NTclustered gi|926788032|ref|XM_014047036.1| 145388 g361505 i0 79.67 0.75 182 27 63 10 3 179 310 486 Monoraphidium neglectum translation initiation factor eIF-3 subunit 4 mRNA blastn 210 122 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
17107069 17107069 PRJNA556992_P_NODE_488274_length_268_cov_2.256410_g486085_i0 PRJNA556992 488274 268 2.25641 6.0471788 Chlamydomonas reinhardtii 3055 Plants Plants 374 4.6099999999999995e-99   NTclustered gi|2082244625|ref|XM_001698617.2| 3055 g486085 i0 92.075 7.53358208955224 265 21 99 0 4 268 497 233 Chlamydomonas reinhardtii ribosomal protein S12 (CHLRE_04g214503v5), mRNA blastn 2019 374 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
17112883 17112883 PRJNA556992_P_NODE_954154_length_235_cov_3.308642_g951964_i0 PRJNA556992 954154 235 3.308642 7.7753087 Coelastrella saipanensis 152631 Plants Plants 435 1.79e-117   NTclustered gi|1642520538|ref|NC_042181.1| 152631 g951964 i0 100 6.04255319148936 235 0 100 0 1 235 50985 50751 Coelastrella saipanensis chloroplast, complete genome blastn 1420 435 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Coelastrella Coelastrella saipanensis
18373950 18373950 PRJNA556992_P_NODE_1034115_length_227_cov_2.649351_g1031925_i0 PRJNA556992 1034115 227 2.649351 6.01402677 [Myrmecia] bisecta 41462 Plants Plants 57.8 1.55e-7   NR KAK9820350.1 41462 g1031925 i0 71.1 0.502202643171806 38 11 50.2 0 227 114 452 489 KAK9820350.1 hypothetical protein WJX72_009343 [[Myrmecia] bisecta] diamond 114 57.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
18374598 18374598 PRJNA556992_P_NODE_1086715_length_216_cov_4.251748_g1084524_i0 PRJNA556992 1086715 216 4.251748 9.18377568 Chlamydomonas incerta 51695 Plants Plants 239 1.36e-58   NTclustered gi|74272604|gb|DQ122867.1| 51695 g1084524 i0 86.636 11.3564814814815 217 27 100 2 1 216 100 315 Chlamydomonas incerta 40S ribosomal protein S15 mRNA, complete cds blastn 2453 239 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas incerta
18375238 18375238 PRJNA556992_P_NODE_1131935_length_205_cov_7.000000_g1129744_i0 PRJNA556992 1131935 205 7 14.35 Chlamydomonas reinhardtii 3055 Plants Plants 54.7 0.005   NTclustered gi|2082240430|ref|XM_043060325.1| 3055 g1129744 i0 96.97 0.160975609756098 33 0 16 1 55 87 1814 1783 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_02g146650v5), mRNA blastn 33 54.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
18375351 18375351 PRJNA556992_P_NODE_1139895_length_203_cov_12.515385_g1137704_i0 PRJNA556992 1139895 203 12.515385 25.40623155 Auxenochlorella protothecoides 3075 Plants Plants 145 2.84e-30   NTclustered gi|760443910|ref|XM_011400722.1| 3075 g1137704 i0 79.803 1.98522167487685 203 37 99 3 1 201 559 759 Auxenochlorella protothecoides Elongation factor 1-alpha partial mRNA blastn 403 145 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
18380194 18380194 PRJNA556992_P_NODE_411755_length_275_cov_2.752475_g409566_i0 PRJNA556992 411755 275 2.752475 7.56930625 Volvox carteri 3067 Plants Plants 156 1.87e-33   NTclustered gi|302833174|ref|XM_002948105.1| 3068 g409566 i0 77.778 16.9818181818182 252 56 92 0 3 254 291 542 Volvox carteri f. nagariensis light-harvesting protein of photosystem I (lhcaB), mRNA blastn 4670 156 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
18380630 18380630 PRJNA556992_P_NODE_444615_length_272_cov_2.170854_g442426_i0 PRJNA556992 444615 272 2.170854 5.90472288 Chlamydomonas reinhardtii 3055 Plants Plants 287 6.280000000000001e-73   NTclustered gi|2082261346|ref|XM_001692857.2| 3055 g442426 i0 86.029 1 272 32 99 2 1 269 343 611 Chlamydomonas reinhardtii ribosomal protein L13a (CHLRE_12g532550v5), mRNA blastn 272 287 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
19652594 19652594 PRJNA556992_P_NODE_257076_length_302_cov_1.344978_g254887_i0 PRJNA556992 257076 302 1.344978 4.06183356 Coccomyxa subellipsoidea 248742 Plants Plants 370 6.83e-98   NTclustered gi|1360638125|gb|AC277041.1| 574566 g254887 i0 88.818 19.3013245033113 313 20 99 8 1 299 39521 39832 Coccomyxa subellipsoidea C-169 clone FAHX05-A01, complete sequence blastn 5829 370 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
19654563 19654563 PRJNA556992_P_NODE_397296_length_277_cov_1.352941_g395107_i0 PRJNA556992 397296 277 1.352941 3.74764657 Polytomella sp. Pringsheim 198.80 37502 Plants Plants 95.3 4.17e-15   NTclustered gi|635557401|emb|FR668147.1| 37502 g395107 i0 93.651 0.227436823104693 63 4 23 0 142 204 1016 954 Polytomella sp. Pringsheim 198.80 mRNA for 60S acidic ribosomal protein P0 (rplP0 gene) blastn 63 95.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Polytomella Polytomella sp. Pringsheim 198.80
19659448 19659448 PRJNA556992_P_NODE_794556_length_246_cov_2.115607_g792366_i0 PRJNA556992 794556 246 2.115607 5.20439322 Desmochloris halophila 138176 Plants Plants 427 3.16e-115   NTclustered gi|371782123|emb|HE610155.1| 138176 g792366 i0 97.967 109.930894308943 246 5 100 0 1 246 2362 2607 Desmochloris halophila plastid 16S rRNA gene (partial), 23S rRNA gene (partial) and ITS1, strain UTEX 2073 blastn 27043 427 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Chlorocystidales Chlorocystidaceae Desmochloris Desmochloris halophila
19660210 19660210 PRJNA556992_P_NODE_854416_length_243_cov_1.676471_g852226_i0 PRJNA556992 854416 243 1.676471 4.0738245300000004 Chloromonas sp. WT-3-1-F 2769847 Plants Plants 422 1.45e-113   NTclustered gi|1899241347|gb|MT968398.1| 2769847 g852226 i0 97.942 100.102880658436 243 5 100 0 1 243 571 813 Chloromonas sp. WT-3-1-F small subunit ribosomal RNA gene, partial sequence blastn 24325 422 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chloromonas Chloromonas sp. WT-3-1-F
19660564 19660564 PRJNA556992_P_NODE_881776_length_241_cov_9.369048_g879586_i0 PRJNA556992 881776 241 9.369048 22.57940568 Chlamydomonas sp. UWO 241 1653778 Plants Plants 95.9 1.43e-21   NR KAG1658792.1 1653778 g879586 i0 66.2 2.66390041493776 65 21 79.7 1 2 193 55 119 KAG1658792.1 hypothetical protein FOA52_011734 [Chlamydomonas sp. UWO 241] diamond 642 95.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas sp. UWO 241
20254473 20254473 PRJNA556992_P_NODE_924696_length_238_cov_3.460606_g922506_i0 PRJNA556992 924696 238 3.460606 8.23624228 [Myrmecia] bisecta 41462 Plants Plants 134 2.2e-34   NR KAK9816865.1 41462 g922506 i0 93.1 0.907563025210084 72 5 90.8 0 216 1 962 1033 KAK9816865.1 hypothetical protein WJX72_006282 [[Myrmecia] bisecta] diamond 216 134 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
20925230 20925230 PRJNA556992_P_NODE_1108577_length_210_cov_12.788321_g1106386_i0 PRJNA556992 1108577 210 12.788321 26.8554741 Chlorophyceae 3166 Plants Plants 122 3.05e-32   NR GIL62224.1 51714 g1106386 i0 79.7 4.88571428571429 69 14 98.6 0 208 2 50 118 GIL62224.1 hypothetical protein Vafri_16497, partial [Volvox africanus] diamond 1026 122 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox africanus
20930235 20930235 PRJNA556992_P_NODE_401877_length_276_cov_2.743842_g399688_i0 PRJNA556992 401877 276 2.743842 7.57300392 Monoraphidium neglectum 145388 Plants Plants 195 3.98e-45   NTclustered gi|926774663|ref|XM_014040352.1| 145388 g399688 i0 83.824 0.739130434782609 204 33 74 0 19 222 82 285 Monoraphidium neglectum 60S ribosomal protein L36 mRNA blastn 204 195 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
20931873 20931873 PRJNA556992_P_NODE_529837_length_264_cov_5.659686_g527648_i0 PRJNA556992 529837 264 5.659686 14.94157104 root 1 Root_unresolved Root_unresolved 79 4.46e-16   NR KAG2493113.1 47281 g527648 i0 84.6 4.73863636363636 39 6 44.3 0 1 117 133 171 KAG2493113.1 hypothetical protein HYH03_008776 [Edaphochlamys debaryana] diamond 1251 79 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales   Edaphochlamys Edaphochlamys debaryana
20932647 20932647 PRJNA556992_P_NODE_593157_length_259_cov_3.086022_g590968_i0 PRJNA556992 593157 259 3.086022 7.99279698 Chlamydomonas reinhardtii 3055 Plants Plants 128 3.81e-25   NTclustered gi|2082254941|ref|XM_001694752.2| 3055 g590968 i0 81.646 1.52509652509653 158 25 81 4 3 158 883 1038 Chlamydomonas reinhardtii ribosomal protein L4 (CHLRE_09g397697v5), mRNA blastn 395 128 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
20936510 20936510 PRJNA556992_P_NODE_900997_length_240_cov_12.820359_g898807_i0 PRJNA556992 900997 240 12.820359 30.7688616 Chlamydomonas reinhardtii 3055 Plants Plants 228 3.3399999999999996e-55   NTclustered gi|2082248363|ref|XM_001695292.2| 3055 g898807 i0 87.817 59.9625 197 20 100 3 1 195 434 240 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g283950v5), mRNA blastn 14391 228 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
21526637 21526637 PRJNA556992_P_NODE_1107257_length_211_cov_4.644928_g1105066_i0 PRJNA556992 1107257 211 4.644928 9.80079808 root 1 Root_unresolved Root_unresolved 385 1.61e-102   NTclustered gi|397087|emb|X68892.1| 28456 g1105066 i0 99.526 113.061611374408 211 1 100 0 1 211 455 245 Chloroplast Chlamydomonas geitleri rrnL gene, exon 2 blastn 23856 385 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas noctigama
21527808 21527808 PRJNA556992_P_NODE_305517_length_288_cov_1.432558_g303328_i0 PRJNA556992 305517 288 1.432558 4.12576704 Scenedesmaceae 3086 Plants Plants 532 7.8e-147   NTclustered gi|404244263|emb|HE965014.1| 3088 g303328 i0 100 99.7013888888889 288 0 100 0 1 288 289 2 Acutodesmus obliquus partial 28S rRNA gene, strain KGE18 blastn 28714 532 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
21529752 21529752 PRJNA556992_P_NODE_853977_length_243_cov_1.735294_g851787_i0 PRJNA556992 853977 243 1.735294 4.21676442 Chlamydomonadales 3042 Plants Plants 368 1.91e-97   NTclustered gi|17028277|gb|L43353.1|CRECPRRNLD 28456 g851787 i0 94.215 138.559670781893 242 13 99 1 2 243 22 262 Chlamydomonas geitleri chloroplast large subunit ribosomal RNA (rrnL) gene blastn 33670 368 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas noctigama
22207413 22207413 PRJNA556992_P_NODE_565158_length_261_cov_7.021277_g562969_i0 PRJNA556992 565158 261 7.021277 18.32553297 Chlamydomonadales 3042 Plants Plants 156 1.28e-44   NR KAJ9517505.1 44745 g562969 i0 89.5 3.95402298850575 86 9 98.9 0 3 260 142 227 KAJ9517505.1 hypothetical protein QJQ45_025016 [Haematococcus lacustris] diamond 1032 156 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
22207909 22207909 PRJNA556992_P_NODE_605058_length_258_cov_3.362162_g602869_i0 PRJNA556992 605058 258 3.362162 8.67437796 Chlamydomonas reinhardtii 3055 Plants Plants 322 1.62e-83   NTclustered gi|2082261495|ref|XM_001692933.2| 3055 g602869 i0 89.147 81.046511627907 258 28 100 0 1 258 518 775 Chlamydomonas reinhardtii ribosomal protein L8 (CHLRE_12g535851v5), mRNA blastn 20910 322 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
22208171 22208171 PRJNA556992_P_NODE_628398_length_256_cov_4.453552_g626209_i0 PRJNA556992 628398 256 4.453552 11.40109312 Monoraphidium neglectum 145388 Plants Plants 298 2.71e-76   NTclustered gi|926782191|ref|XM_014044116.1| 145388 g626209 i0 87.795 73.1875 254 31 99 0 1 254 253 506 Monoraphidium neglectum hypothetical protein mRNA blastn 18736 298 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
22208210 22208210 PRJNA556992_P_NODE_631918_length_256_cov_2.732240_g629729_i0 PRJNA556992 631918 256 2.73224 6.9945344 Prototheca wickerhamii 3111 Plants Plants 75.1 1.44e-13   NR KAK2076881.1 3111 g629729 i0 64.3 0.65625 56 20 65.6 0 1 168 319 374 KAK2076881.1 Phosphoribosylaminoimidazole-succinocarboxamide synthase (SAICAR synthetase) [Prototheca wickerhamii] diamond 168 75.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii
23474359 23474359 PRJNA556992_P_NODE_1010659_length_229_cov_4.044872_g1008469_i0 PRJNA556992 1010659 229 4.044872 9.26275688 Chlamydomonas reinhardtii 3055 Plants Plants 52.8 0.02   NTclustered gi|2082248536|ref|XM_043063373.1| 3055 g1008469 i0 100 0.122270742358079 28 0 12 0 153 180 10147 10120 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g287950v5), mRNA blastn 28 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
23474447 23474447 PRJNA556992_P_NODE_1017839_length_228_cov_6.425806_g1015649_i0 PRJNA556992 1017839 228 6.425806 14.65083768 Chlamydomonas reinhardtii 3055 Plants Plants 193 1.15e-44   NTclustered gi|20269801|gb|AF495472.1| 3055 g1015649 i0 90.411 57.9342105263158 146 14 64 0 1 146 279 134 Chlamydomonas reinhardtii major light-harvesting complex II protein m6 mRNA, complete cds; nuclear gene for chloroplast product blastn 13209 193 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
23474502 23474502 PRJNA556992_P_NODE_1022599_length_228_cov_3.180645_g1020409_i0 PRJNA556992 1022599 228 3.180645 7.2518706 Monoraphidium neglectum 145388 Plants Plants 156 1.51e-33   NTclustered gi|926774671|ref|XM_014040356.1| 145388 g1020409 i0 90.083 66.0745614035088 121 10 53 2 71 190 141 22 Monoraphidium neglectum molecular chaperone HtpG mRNA blastn 15065 156 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum

Next page

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;