contig_metadata
6 rows where bioproject = "PRJNA556992" and tax_clade = "ant, tsetse, mealybug, aphid, etc. endosymbionts"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 535119 | 535119 | PRJNA556992_P_NODE_959881_length_234_cov_6.465839_g957691_i0 | PRJNA556992 | 959881 | 234 | 6.465839 | 15.13006326 | Candidatus Regiella endosymbiont of Tuberolachnus salignus | 3077956 | Bacteria | Bacteria | 239 | 1.4999999999999999e-58 | NTclustered | gi|2706543121|emb|OZ026542.1| | 3077956 | g957691 | i0 | 85.043 | 4 | 234 | 35 | 100 | 0 | 1 | 234 | 414498 | 414731 | Candidatus Regiella endosymbiont of Tuberolachnus salignus isolate 50df7a5c-45bd-4916-af13-c11c5892e7e1 genome assembly, chromosome: 1 | blastn | 936 | 239 | 1 | Bacteria | ant, tsetse, mealybug, aphid, etc. endosymbionts | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Candidatus Regiella | Candidatus Regiella endosymbiont of Tuberolachnus salignus | |
| 1124354 | 1124354 | PRJNA556992_P_NODE_1048301_length_225_cov_5.302632_g1046111_i0 | PRJNA556992 | 1048301 | 225 | 5.302632 | 11.930922 | Gammaproteobacteria | 1236 | Bacteria | Bacteria | 169 | 1.9e-37 | NTclustered | gi|1277660611|gb|CP017613.1| | 138072 | g1046111 | i0 | 82.234 | 31.0266666666667 | 197 | 34 | 87 | 1 | 30 | 225 | 229620 | 229816 | Candidatus Hamiltonella defensa strain ZA17 chromosome | blastn | 6981 | 169 | 1 | Bacteria | ant, tsetse, mealybug, aphid, etc. endosymbionts | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Candidatus Williamhamiltonella | Candidatus Williamhamiltonella defendens | |
| 6907232 | 6907232 | PRJNA556992_P_NODE_482166_length_269_cov_1.275510_g479977_i0 | PRJNA556992 | 482166 | 269 | 1.27551 | 3.4311219 | Candidatus Stammera capleta | 2608262 | Bacteria | Bacteria | 110 | 1.44e-19 | NTclustered | gi|1925240929|gb|CP062308.1| | 2608262 | g479977 | i0 | 80 | 40.4312267657993 | 165 | 19 | 58 | 11 | 113 | 267 | 60744 | 60584 | MAG: Candidatus Stammera capleta isolate 1 chromosome, complete genome | blastn | 10876 | 110 | 1 | Bacteria | ant, tsetse, mealybug, aphid, etc. endosymbionts | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Candidatus Stammera | Candidatus Stammera capleta | |
| 14551871 | 14551871 | PRJNA556992_P_NODE_1086292_length_216_cov_4.510490_g1084101_i0 | PRJNA556992 | 1086292 | 216 | 4.51049 | 9.7426584 | Symbiopectobacterium purcellii | 2871826 | Bacteria | Bacteria | 285 | 1.73e-72 | NTclustered | gi|2087438146|gb|CP081864.1| | 2871826 | g1084101 | i0 | 90.654 | 82.1296296296296 | 214 | 20 | 99 | 0 | 1 | 214 | 4824096 | 4823883 | Symbiopectobacterium purcellii strain SyEd1 chromosome, complete genome | blastn | 17740 | 285 | 1 | Bacteria | ant, tsetse, mealybug, aphid, etc. endosymbionts | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Symbiopectobacterium | Symbiopectobacterium purcellii | |
| 14553711 | 14553711 | PRJNA556992_P_NODE_157932_length_352_cov_6.086022_g155744_i0 | PRJNA556992 | 157932 | 352 | 6.086022 | 21.42279744 | Candidatus Regiella insecticola | 138073 | Bacteria | Bacteria | 237 | 8.56e-58 | NTclustered | gi|148369039|gb|AC202197.2| | 138073 | g155744 | i0 | 79.412 | 2.02272727272727 | 340 | 67 | 96 | 3 | 8 | 346 | 26002 | 25665 | Regiella insecticola BAC CUGI_APP_BA-012L18 () complete sequence | blastn | 712 | 237 | 1 | Bacteria | ant, tsetse, mealybug, aphid, etc. endosymbionts | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Candidatus Regiella | Candidatus Regiella insecticola | |
| 28783750 | 28783750 | PRJNA556992_P_NODE_567107_length_261_cov_3.691489_g564918_i0 | PRJNA556992 | 567107 | 261 | 3.691489 | 9.63478629 | Candidatus Symbiopectobacterium sp. Chty_BC | 2794626 | Bacteria | Bacteria | 90.9 | 1.13e-21 | NR | NLS43132.1 | 2794626 | g564918 | i0 | 74.2 | 0.758620689655172 | 66 | 16 | 75.9 | 1 | 62 | 259 | 5 | 69 | NLS43132.1 hypothetical protein [Candidatus Symbiopectobacterium sp. Chty_BC] | diamond | 198 | 90.9 | 1 | Bacteria | ant, tsetse, mealybug, aphid, etc. endosymbionts | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Symbiopectobacterium | Candidatus Symbiopectobacterium sp. Chty_BC |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;