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contig_metadata

17 rows where bioproject = "PRJNA556992", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 17 ✖

tax_clade 1

  • Sar · 17 ✖

bioproject 1

  • PRJNA556992 · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4351263 4351263 PRJNA556992_P_NODE_123044_length_380_cov_4.247557_g120857_i0 PRJNA556992 123044 380 4.247557 16.1407166 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 309 1.95e-79   NTclustered gi|238617605|gb|FJ973380.1| 45107 g120857 i0 81.794 99.8289473684211 379 59 99 10 5 380 1690 1319 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 37935 309 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
4952744 4952744 PRJNA556992_P_NODE_1113424_length_209_cov_8.941176_g1111233_i0 PRJNA556992 1113424 209 8.941176 18.68705784 Cercomonadidae 45108 SAR_Eukaryotes SAR_Eukaryotes 387 4.42e-103   NTclustered gi|33309629|gb|AF411271.1| 188955 g1111233 i0 100 98.6028708133971 209 0 100 0 1 209 113 321 Cercomonas sp. (Tempisque) 18S ribosomal RNA gene, complete sequence blastn 20608 387 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp. Tempisque
5636073 5636073 PRJNA556992_P_NODE_719505_length_250_cov_1.711864_g717316_i0 PRJNA556992 719505 250 1.711864 4.27966 Rosculus sp. 2231160 SAR_Eukaryotes SAR_Eukaryotes 462 8.83e-126   NTclustered gi|1402550473|gb|MH488759.1| 2231160 g717316 i0 100 4.772 250 0 100 0 1 250 492 243 Rosculus sp. isolate CSA small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 1193 462 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus sp.
7502334 7502334 PRJNA556992_P_NODE_1008086_length_229_cov_6.679487_g1005896_i0 PRJNA556992 1008086 229 6.679487 15.29602523 root 1 Root_unresolved Root_unresolved 359 1.07e-94   NTclustered gi|238617605|gb|FJ973380.1| 45107 g1005896 i0 94.828 41.3973799126638 232 9 100 3 1 229 2150 2381 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 9480 361 0.994459833795014 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
8185725 8185725 PRJNA556992_P_NODE_77187_length_439_cov_11.816940_g75008_i0 PRJNA556992 77187 439 11.81694 51.8763666 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 811 0   NTclustered gi|238617602|gb|FJ973377.1| 188950 g75008 i0 100 19.6082004555809 439 0 100 0 1 439 784 346 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 8608 811 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
14564032 14564032 PRJNA556992_P_NODE_948952_length_236_cov_2.067485_g946762_i0 PRJNA556992 948952 236 2.067485 4.8792646 Guttulinopsis rogosa 2231170 SAR_Eukaryotes SAR_Eukaryotes 257 4.18e-64   NTclustered gi|1402550486|gb|MH488772.1| 2231170 g946762 i0 97.973 29.9364406779661 148 3 63 0 1 148 1393 1540 Guttulinopsis rogosa isolate T1 small subunit ribosomal RNA gene, partial sequence blastn 7065 257 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Guttulinopsis Guttulinopsis rogosa
17112370 17112370 PRJNA556992_P_NODE_91274_length_416_cov_8.690962_g89091_i0 PRJNA556992 91274 416 8.690962 36.15440192 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 398 4.459999999999998e-106   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g89091 i0 85.751 59.5384615384615 386 44 92 11 1 381 3660 4039 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 24768 398 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
19652815 19652815 PRJNA556992_P_NODE_271856_length_296_cov_1.381166_g269667_i0 PRJNA556992 271856 296 1.381166 4.08825136 Rosculus sp. 2231160 SAR_Eukaryotes SAR_Eukaryotes 545 1.03e-150   NTclustered gi|1402550473|gb|MH488759.1| 2231160 g269667 i0 100 19.7027027027027 295 0 99 0 1 295 1618 1912 Rosculus sp. isolate CSA small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 5832 545 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus sp.
19655495 19655495 PRJNA556992_P_NODE_475996_length_269_cov_2.576531_g473807_i0 PRJNA556992 475996 269 2.576531 6.93086839 Paulinella micropora 1928728 SAR_Eukaryotes SAR_Eukaryotes 268 2.2499999999999994e-67   NTclustered gi|1767048364|dbj|LC490352.1| 1928728 g473807 i0 87.607 71.3866171003718 234 25 86 3 13 244 13859 14090 Paulinella micropora MYN1 mitochondrial DNA, complete sequence blastn 19203 268 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Paulinellidae Paulinella Paulinella micropora
21528680 21528680 PRJNA556992_P_NODE_546377_length_263_cov_2.400000_g544188_i0 PRJNA556992 546377 263 2.4 6.312 root 1 Root_unresolved Root_unresolved 407 4.45e-109   NTclustered gi|238617605|gb|FJ973380.1| 45107 g544188 i0 94.403 101.285171102662 268 10 100 4 1 263 2454 2187 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 26638 409 0.995110024449878 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
22201116 22201116 PRJNA556992_P_NODE_123498_length_380_cov_2.172638_g121311_i0 PRJNA556992 123498 380 2.172638 8.2560244 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 219 3.369999999999999e-52   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g121311 i0 93.243 26.5631578947368 148 10 39 0 43 190 3691 3838 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 10094 219 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
24752837 24752837 PRJNA556992_P_NODE_280300_length_293_cov_1.400000_g278111_i0 PRJNA556992 280300 293 1.4 4.102 Rosculus philanguis 2231163 SAR_Eukaryotes SAR_Eukaryotes 291 5.289999999999999e-74   NTclustered gi|1402550480|gb|MH488766.1| 2231163 g278111 i0 89.912 11.5631399317406 228 20 77 2 69 293 495 268 Rosculus philanguis isolate HAS small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 3388 291 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus philanguis
24759828 24759828 PRJNA556992_P_NODE_831100_length_244_cov_2.432749_g828910_i0 PRJNA556992 831100 244 2.432749 5.93590756 Cercomonas metabolicus 352462 SAR_Eukaryotes SAR_Eukaryotes 137 5.91e-28   NTclustered gi|161015704|gb|EF681938.1| 352462 g828910 i0 77.966 1.93852459016393 236 41 95 8 6 237 318 546 Cercomonas metabolicus strain HFCC88 28S ribosomal RNA gene, partial sequence blastn 473 137 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas metabolicus
28973731 28973731 PRJNA556992_P_NODE_987288_length_232_cov_2.238994_g985098_i0 PRJNA556992 987288 232 2.238994 5.19446608 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 50.4 6.23e-5   NR MES1910244.1 1215613 g985098 i0 48.9 0.607758620689655 47 24 60.8 0 92 232 471 517 MES1910244.1 hypothetical protein [Cercozoa sp. M6MM] diamond 141 50.4 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
29036664 29036664 PRJNA556992_P_NODE_455268_length_271_cov_2.171717_g453079_i0 PRJNA556992 455268 271 2.171717 5.88535307 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 107 9.33e-25   NR MES1907663.1 1215613 g453079 i0 62.5 1.06273062730627 96 29 98.5 2 269 3 521 616 MES1907663.1 hypothetical protein [Cercozoa sp. M6MM] diamond 288 107 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
31374385 31374385 PRJNA556992_P_NODE_694996_length_251_cov_2.831461_g692807_i0 PRJNA556992 694996 251 2.831461 7.10696711 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 50.4 7.9e-5   NR MES1911702.1 1215613 g692807 i0 53.5 0.51394422310757 43 20 51.4 0 210 82 52 94 MES1911702.1 hypothetical protein [Cercozoa sp. M6MM] diamond 129 50.4 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
32513116 32513116 PRJNA556992_P_NODE_1078799_length_217_cov_13.673611_g1076608_i0 PRJNA556992 1078799 217 13.673611 29.67173587 Bigelowiella natans 227086 SAR_Eukaryotes SAR_Eukaryotes 92.4 1.21e-21   NR AAY21202.1 227086 g1076608 i0 70 1.65898617511521 60 17 82.9 1 183 4 16 74 AAY21202.1 Rpl7A, partial [Bigelowiella natans] diamond 360 92.4 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Bigelowiella Bigelowiella natans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;