RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA556992", tax_clade = "Caldisericota/Cryosericota group" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 6 ✖

tax_kingdom 1

tax_clade 1

  • Caldisericota/Cryosericota group · 6 ✖

bioproject 1

  • PRJNA556992 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12607048 12607048 PRJNA556992_P_NODE_958170_length_235_cov_2.253086_g955980_i0 PRJNA556992 958170 235 2.253086 5.2947521 Caldisericum 693074 Bacteria Bacteria 206 1.53e-48   NTclustered gi|381363297|dbj|AP012051.1| 511051 g955980 i0 90 169.774468085106 160 15 68 1 26 185 544430 544588 Caldisericum exile AZM16c01 DNA, complete genome blastn 39897 206 1 Bacteria Caldisericota/Cryosericota group Pseudomonadati Caldisericota Caldisericia Caldisericales Caldisericaceae Caldisericum Caldisericum exile
26903198 26903198 PRJNA556992_P_NODE_38481_length_568_cov_4.525253_g36341_i0 PRJNA556992 38481 568 4.525253 25.70343704 Pseudomonadati 3379134 Bacteria Bacteria 116 1.3500000000000002e-26   NR MDO9099684.1 2052147 g36341 i0 39.2 2.9419014084507 166 85 81.3 3 464 3 149 310 MDO9099684.1 ATP-binding protein [Caldisericota bacterium] diamond 1671 117 0.991452991452991 Bacteria Caldisericota/Cryosericota group Pseudomonadati Caldisericota         Caldisericota bacterium
29573005 29573005 PRJNA556992_P_NODE_365650_length_280_cov_2.285024_g363461_i0 PRJNA556992 365650 280 2.285024 6.3980672 Caldisericota bacterium 2052147 Bacteria Bacteria 46.2 0.00353   NR MDO9100078.1 2052147 g363461 i0 32.2 0.964285714285714 90 61 96.4 0 279 10 102 191 MDO9100078.1 VWA domain-containing protein [Caldisericota bacterium] diamond 270 46.2 1 Bacteria Caldisericota/Cryosericota group Pseudomonadati Caldisericota         Caldisericota bacterium
30647118 30647118 PRJNA556992_P_NODE_716373_length_250_cov_2.327684_g714184_i0 PRJNA556992 716373 250 2.327684 5.81921 Caldisericota bacterium 2052147 Bacteria Bacteria 57 3.69e-7   NR MDO9099684.1 2052147 g714184 i0 34.1 0.984 82 52 96 1 248 9 162 243 MDO9099684.1 ATP-binding protein [Caldisericota bacterium] diamond 246 57 1 Bacteria Caldisericota/Cryosericota group Pseudomonadati Caldisericota         Caldisericota bacterium
32607578 32607578 PRJNA556992_P_NODE_18560_length_784_cov_4.905767_g16680_i0 PRJNA556992 18560 784 4.905767 38.46121328 Candidatus Cryosericum sp. 2815585 Bacteria Bacteria 201 3.68e-56   NR HOV50847.1 2815585 g16680 i0 43.7 5.98469387755102 261 142 99.9 1 784 2 22 277 HOV50847.1 NAD-dependent DNA ligase LigA [Candidatus Cryosericum sp.] diamond 4692 201 1 Bacteria Caldisericota/Cryosericota group Pseudomonadati Candidatus Cryosericota Candidatus Cryosericia Candidatus Cryosericales Candidatus Cryosericaceae Candidatus Cryosericum Candidatus Cryosericum sp.
32670704 32670704 PRJNA556992_P_NODE_680820_length_252_cov_3.279330_g678631_i0 PRJNA556992 680820 252 3.27933 8.2639116 Caldisericota bacterium 2052147 Bacteria Bacteria 109 4.08e-28   NR MDO9100505.1 2052147 g678631 i0 72.6 1 84 23 100 0 1 252 88 171 MDO9100505.1 hypothetical protein [Caldisericota bacterium] diamond 252 109 1 Bacteria Caldisericota/Cryosericota group Pseudomonadati Caldisericota         Caldisericota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;