RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA556842" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

bioproject 1

  • PRJNA556842 · 2 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27836243 27836243 PRJNA556842_P_NODE_14764_length_175_cov_1.123188_g14259_i0 PRJNA556842 14764 175 1.123188 1.965579 archaeon 1906665 Archaea Archaea 109 8.53e-29   NR RYG68742.1 1906665 g14259 i0 86.2 0.994285714285714 58 8 99.4 0 2 175 40 97 RYG68742.1 MAG: hypothetical protein EON64_04505 [archaeon] diamond 174 109 1 Archaea               archaeon
31848215 31848215 PRJNA556842_P_NODE_11357_length_217_cov_2.133333_g10852_i0 PRJNA556842 11357 217 2.133333 4.62933261 archaeon 1906665 Archaea Archaea 112 3.11e-30   NR RYG96209.1 1906665 g10852 i0 84.1 0.870967741935484 63 10 87.1 0 216 28 35 97 RYG96209.1 MAG: hypothetical protein EON65_54770, partial [archaeon] diamond 189 112 1 Archaea               archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;