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contig_metadata

31 rows where bioproject = "PRJNA556842" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 31 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA556842 · 31 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
521755 521755 PRJNA556842_P_NODE_14361_length_178_cov_3.801418_g13856_i0 PRJNA556842 14361 178 3.801418 6.76652404 Rhodosporidiobolus fuzhouensis 2877798 Fungi Fungi 329 6.21e-86   NTclustered gi|1815405437|gb|MN180193.1| 2877798 g13856 i0 100 100 178 0 100 0 1 178 1413 1590 Rhodosporidiobolus fuzhouensis strain CGMCC2.2286 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 17800 329 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Rhodosporidiobolus Rhodosporidiobolus fuzhouensis
1124157 1124157 PRJNA556842_P_NODE_7141_length_318_cov_3.113879_g6638_i0 PRJNA556842 7141 318 3.113879 9.90213522 Robbauera 1804768 Fungi Fungi 588 1.84e-163   NTclustered gi|2402693590|dbj|LC631637.1| 58915 g6638 i0 100 99.5754716981132 318 0 100 0 1 318 439 122 Robbauera albescens WS35_1_1_A_As_10000 gene for 28S rRNA, partial sequence blastn 31665 588 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Robbauerales Robbaueraceae Robbauera Robbauera albescens
1124160 1124160 PRJNA556842_P_NODE_9101_length_261_cov_69.022321_g8596_i0 PRJNA556842 9101 261 69.022321 180.14825781 Malassezia 55193 Fungi Fungi 477 3.3099999999999986e-130   NTclustered gi|56474918|gb|AY743630.1| 76773 g8596 i0 99.617 100 261 1 100 0 1 261 528 268 Malassezia globosa strain CBS 7966 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 26100 477 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
2399574 2399574 PRJNA556842_P_NODE_14842_length_174_cov_1.678832_g14337_i0 PRJNA556842 14842 174 1.678832 2.92116768 Naganishia 1851509 Fungi Fungi 322 1.01e-83   NTclustered gi|400622137|gb|JX092244.1| 89922 g14337 i0 100 97.9367816091954 174 0 100 0 1 174 636 463 Cryptococcus friedmannii strain CCFEE 5183 large subunit ribosomal RNA gene, partial sequence blastn 17041 322 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Filobasidiales Filobasidiaceae Naganishia Naganishia friedmannii
3072720 3072720 PRJNA556842_P_NODE_15503_length_168_cov_2.106870_g14998_i0 PRJNA556842 15503 168 2.10687 3.5395416 Pseudomicrostroma juglandis 5033 Fungi Fungi 213 6.12e-51   NTclustered gi|927029541|gb|KP413052.1| 5033 g14998 i0 90 105.22619047619 170 7 100 7 1 168 2058 1897 Microstroma juglandis voucher KRAM F-57380 28S ribosomal RNA gene, partial sequence blastn 17678 213 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Microstromatales   Pseudomicrostroma Pseudomicrostroma juglandis
3675490 3675490 PRJNA556842_P_NODE_9723_length_248_cov_2.682464_g9218_i0 PRJNA556842 9723 248 2.682464 6.65251072 Basidiomycota 5204 Fungi Fungi 448 2.4499999999999996e-121   NTclustered gi|755223261|gb|KM891571.1| 105772 g9218 i0 99.592 98.8508064516129 245 1 99 0 4 248 290 46 Cystobasidium laryngis strain AP3-23Y 26S ribosomal RNA gene, partial sequence blastn 24515 448 1 Eukaryota Opisthokonta Fungi Basidiomycota Cystobasidiomycetes Cystobasidiales Cystobasidiaceae Cystobasidium Cystobasidium laryngis
4348919 4348919 PRJNA556842_P_NODE_15064_length_172_cov_1.466667_g14559_i0 PRJNA556842 15064 172 1.466667 2.52266724 Rhodosporidiobolus fuzhouensis 2877798 Fungi Fungi 291 2.81e-74   NTclustered gi|2440671558|gb|OQ388317.1| 2877798 g14559 i0 97.093 100 172 5 100 0 1 172 629 800 Rhodosporidiobolus fuzhouensis isolate JL265 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 17200 291 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Rhodosporidiobolus Rhodosporidiobolus fuzhouensis
4348921 4348921 PRJNA556842_P_NODE_15544_length_168_cov_1.366412_g15039_i0 PRJNA556842 15544 168 1.366412 2.29557216 Mycena inclinata 1978344 Fungi Fungi 195 2.22e-45   NTclustered gi|1859735587|gb|MT644905.1| 1978344 g15039 i0 87.647 100.928571428571 170 18 100 3 1 168 5882 6050 Mycena inclinata isolate DM1052 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 16956 195 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Mycenaceae Mycena Mycena inclinata
5625672 5625672 PRJNA556842_P_NODE_11425_length_216_cov_2.122905_g10920_i0 PRJNA556842 11425 216 2.122905 4.5854748 Malassezia globosa 76773 Fungi Fungi 399 5.909999999999999e-107   NTclustered gi|1805972860|gb|CP046440.1| 76773 g10920 i0 100 45.7361111111111 216 0 100 0 1 216 30050 29835 Malassezia globosa strain CBS7966 mitochondrion, complete genome blastn 9879 399 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
5625678 5625678 PRJNA556842_P_NODE_15425_length_169_cov_1.265152_g14920_i0 PRJNA556842 15425 169 1.265152 2.13810688 Leucosporidium sp. AY30 662878 Fungi Fungi 224 2.8299999999999995e-54   NTclustered gi|254927417|gb|GQ336996.1| 662878 g14920 i0 90.588 56.8165680473373 170 15 100 1 1 169 5733 5564 Leucosporidium sp. AY30 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence blastn 9602 224 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Leucosporidiales Leucosporidiaceae Leucosporidium Leucosporidium sp. AY30
5625683 5625683 PRJNA556842_P_NODE_16965_length_157_cov_1.283333_g16460_i0 PRJNA556842 16965 157 1.283333 2.01483281 Ustilago hordei 120017 Fungi Fungi 102 1.27e-17   NTclustered gi|52627273|gb|AC119572.26| 120017 g16460 i0 91.026 0.993630573248408 78 4 49 2 81 157 71618 71693 Ustilago hordei strain 4857-4 clone uhobac-5d9, complete sequence blastn 156 102 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Ustilago Ustilago hordei
6899704 6899704 PRJNA556842_P_NODE_15406_length_169_cov_1.568182_g14901_i0 PRJNA556842 15406 169 1.568182 2.65022758 Rhodotorula glutinis 5535 Fungi Fungi 244 2.1699999999999999e-60   NTclustered gi|225134685|gb|FJ345357.1| 5535 g14901 i0 92.899 103.96449704142 169 11 100 1 1 169 3789 3956 Rhodotorula glutinis strain ATCC 16726 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 17570 244 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Rhodotorula Rhodotorula glutinis
8174570 8174570 PRJNA556842_P_NODE_4887_length_416_cov_1.298153_g4390_i0 PRJNA556842 4887 416 1.298153 5.40031648 Malassezia globosa 76773 Fungi Fungi 769 0   NTclustered gi|1805972860|gb|CP046440.1| 76773 g4390 i0 100 71.5360576923077 416 0 100 0 1 416 2440 2025 Malassezia globosa strain CBS7966 mitochondrion, complete genome blastn 29759 769 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
9450200 9450200 PRJNA556842_P_NODE_17408_length_154_cov_0.974359_g16903_i0 PRJNA556842 17408 154 0.974359 1.50051286 Malassezia globosa 76773 Fungi Fungi 279 5.33e-71   NTclustered gi|1805972860|gb|CP046440.1| 76773 g16903 i0 99.351 9 154 1 100 0 1 154 2855 2702 Malassezia globosa strain CBS7966 mitochondrion, complete genome blastn 1386 279 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
10052582 10052582 PRJNA556842_P_NODE_16408_length_161_cov_1.064516_g15903_i0 PRJNA556842 16408 161 1.064516 1.71387076 Sporidiobolaceae 1799696 Fungi Fungi 298 1.56e-76   NTclustered gi|1807245876|gb|MT036033.1| 33191 g15903 i0 100 99.9937888198758 161 0 100 0 1 161 378 538 Rhodosporidiobolus lusitaniae strain SX2-3-1 large subunit ribosomal RNA gene, partial sequence blastn 16099 298 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Rhodosporidiobolus Rhodosporidiobolus lusitaniae
10725956 10725956 PRJNA556842_P_NODE_15649_length_167_cov_1.192308_g15144_i0 PRJNA556842 15649 167 1.192308 1.99115436 Trametes versicolor 5325 Fungi Fungi 115 1.76e-21   NTclustered gi|636620084|ref|XM_008042986.1| 717944 g15144 i0 97.059 0.407185628742515 68 2 41 0 1 68 56 123 Trametes versicolor FP-101664 SS1 uncharacterized protein (TRAVEDRAFT_50531), partial mRNA blastn 68 115 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Trametes Trametes versicolor
12000734 12000734 PRJNA556842_P_NODE_10930_length_225_cov_1.515957_g10425_i0 PRJNA556842 10930 225 1.515957 3.41090325 Malassezia globosa 76773 Fungi Fungi 394 2.89e-105   NTclustered gi|1805972860|gb|CP046440.1| 76773 g10425 i0 98.222 97.8533333333333 225 4 100 0 1 225 2664 2440 Malassezia globosa strain CBS7966 mitochondrion, complete genome blastn 22017 394 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
12000740 12000740 PRJNA556842_P_NODE_15330_length_170_cov_1.165414_g14825_i0 PRJNA556842 15330 170 1.165414 1.9812038 Malassezia globosa 76773 Fungi Fungi 315 1.64e-81   NTclustered gi|32452409|dbj|AB099880.1| 76773 g14825 i0 100 2.01176470588235 170 0 100 0 1 170 873 1042 Malassezia globosa DNA, intergenic spacer 2 region sequence, strain: CBS 8745 blastn 342 315 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
12000741 12000741 PRJNA556842_P_NODE_15390_length_169_cov_2.030303_g14885_i0 PRJNA556842 15390 169 2.030303 3.43121207 Malassezia globosa 76773 Fungi Fungi 257 2.79e-64   NTclustered gi|164657322|ref|XM_001729736.1| 425265 g14885 i0 94.083 4.9585798816568 169 10 100 0 1 169 345 177 Malassezia globosa CBS 7966 uncharacterized protein (MGL_3332), partial mRNA blastn 838 257 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
12603115 12603115 PRJNA556842_P_NODE_17310_length_154_cov_2.153846_g16805_i0 PRJNA556842 17310 154 2.153846 3.31692284 Pucciniales 5258 Fungi Fungi 268 1.15e-67   NTclustered gi|3298448|dbj|AB011050.1| 73164 g16805 i0 98.065 100.344155844156 155 2 100 1 1 154 179 333 Aecidium epimedii gene for 18S rRNA, partial sequence blastn 15453 268 1 Eukaryota Opisthokonta Fungi Basidiomycota Pucciniomycetes Pucciniales   Aecidium Aecidium epimedii
13275853 13275853 PRJNA556842_P_NODE_7351_length_311_cov_4.558394_g6847_i0 PRJNA556842 7351 311 4.558394 14.17660534 Fibroporia vaillantii 984094 Fungi Fungi 331 3.33e-86   NTclustered gi|110290607|emb|AM286436.1| 984094 g6847 i0 86.408 87.2508038585209 309 34 98 6 8 311 5675 5370 Antrodia vaillantii complete rDNA unit (18S, ITS1, 5.8S, ITS2, 28S, IGS1 5S and IGS2), isolate 240 blastn 27135 331 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Fibroporiaceae Fibroporia Fibroporia vaillantii
15152225 15152225 PRJNA556842_P_NODE_5472_length_385_cov_3.658046_g4973_i0 PRJNA556842 5472 385 3.658046 14.0834771 Cystobasidium 203525 Fungi Fungi 649 0   NTclustered gi|1059433344|dbj|LC176992.1| 29899 g4973 i0 97.143 96.0935064935065 385 10 100 1 1 385 458 75 Cystobasidium minutum gene for large subunit ribosomal RNA, partial sequence, strain: DMKU-SE74 blastn 36996 649 1 Eukaryota Opisthokonta Fungi Basidiomycota Cystobasidiomycetes Cystobasidiales Cystobasidiaceae Cystobasidium Cystobasidium minutum
19648137 19648137 PRJNA556842_P_NODE_15736_length_166_cov_1.751938_g15231_i0 PRJNA556842 15736 166 1.751938 2.90821708 Malassezia globosa 76773 Fungi Fungi 307 2.69e-79   NTclustered gi|1805972860|gb|CP046440.1| 76773 g15231 i0 100 37.4277108433735 166 0 100 0 1 166 1686 1521 Malassezia globosa strain CBS7966 mitochondrion, complete genome blastn 6213 307 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
20923931 20923931 PRJNA556842_P_NODE_13377_length_189_cov_1.513158_g12872_i0 PRJNA556842 13377 189 1.513158 2.85986862 Malassezia globosa 76773 Fungi Fungi 350 5.14e-92   NTclustered gi|1805972860|gb|CP046440.1| 76773 g12872 i0 100 45.4285714285714 189 0 100 0 1 189 409 221 Malassezia globosa strain CBS7966 mitochondrion, complete genome blastn 8586 350 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
20923935 20923935 PRJNA556842_P_NODE_2337_length_659_cov_5.049839_g1916_i0 PRJNA556842 2337 659 5.049839 33.27843901 Cystobasidium laryngis 105772 Fungi Fungi 1195 0   NTclustered gi|1358186635|gb|MH047192.1| 105772 g1916 i0 99.393 100.438543247344 659 4 100 0 1 659 3571 4229 Cystobasidium laryngis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 66189 1195 1 Eukaryota Opisthokonta Fungi Basidiomycota Cystobasidiomycetes Cystobasidiales Cystobasidiaceae Cystobasidium Cystobasidium laryngis
20923939 20923939 PRJNA556842_P_NODE_9957_length_243_cov_5.805825_g9452_i0 PRJNA556842 9957 243 5.805825 14.10815475 Pseudomicrostroma glucosiphilum 1684307 Fungi Fungi 381 2.4599999999999995e-101   NTclustered gi|1418639566|ref|XM_025493755.1| 1684307 g9452 i0 95.041 137.078189300412 242 12 99 0 1 242 72 313 Pseudomicrostroma glucosiphilum hypothetical protein (BCV69DRAFT_291557), mRNA blastn 33310 381 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Microstromatales   Pseudomicrostroma Pseudomicrostroma glucosiphilum
21526201 21526201 PRJNA556842_P_NODE_12397_length_201_cov_17.432927_g11892_i0 PRJNA556842 12397 201 17.432927 35.04018327 Basidiomycota 5204 Fungi Fungi 355 1.19e-93   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g11892 i0 98.507 137.666666666667 201 3 100 0 1 201 1304 1504 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 27671 355 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
21526207 21526207 PRJNA556842_P_NODE_17897_length_150_cov_1.707965_g17392_i0 PRJNA556842 17897 150 1.707965 2.5619475 Fungi 4751 Fungi Fungi 272 8.609999999999998e-69   NTclustered gi|1102645042|gb|KY108612.1| 89919 g17392 i0 99.333 99.9866666666667 150 1 100 0 1 150 678 827 Naganishia diffluens culture CBS:966 large subunit ribosomal RNA gene, partial sequence blastn 14998 272 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Filobasidiales Filobasidiaceae Naganishia Naganishia diffluens
22801338 22801338 PRJNA556842_P_NODE_4158_length_463_cov_9.086854_g3665_i0 PRJNA556842 4158 463 9.086854 42.07213402 Basidiomycota 5204 Fungi Fungi 640 7.54e-179   NTclustered gi|148358060|gb|DQ071745.2| 330940 g3665 i0 91.793 102.008639308855 463 33 100 4 1 463 1250 1707 Leucocortinarius bulbiger voucher TUB 011568 28S large subunit ribosomal RNA gene, partial sequence blastn 47230 640 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales   Leucocortinarius Leucocortinarius bulbiger
23474219 23474219 PRJNA556842_P_NODE_14919_length_173_cov_2.448529_g14414_i0 PRJNA556842 14919 173 2.448529 4.23595517 Cystobasidium laryngis 105772 Fungi Fungi 311 2.17e-80   NTclustered gi|1358186635|gb|MH047192.1| 105772 g14414 i0 100 70.3121387283237 168 0 97 0 6 173 4406 4239 Cystobasidium laryngis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 12164 311 1 Eukaryota Opisthokonta Fungi Basidiomycota Cystobasidiomycetes Cystobasidiales Cystobasidiaceae Cystobasidium Cystobasidium laryngis
31278846 31278846 PRJNA556842_P_NODE_17815_length_151_cov_1.017544_g17310_i0 PRJNA556842 17815 151 1.017544 1.53649144 Phenoliferia sp. Uapishka_3 3038894 Fungi Fungi 73.9 7.05e-14   NR KAK4702989.1 3038894 g17310 i0 72.3 0.933774834437086 47 13 93.4 0 146 6 15 61 KAK4702989.1 hypothetical protein P7C70_g3232, partial [Phenoliferia sp. Uapishka_3] diamond 141 73.9 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Kriegeriales Kriegeriaceae Phenoliferia Phenoliferia sp. Uapishka_3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;