RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA554794", tax_kingdom = "Metazoa" and tax_phylum = "Rotifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Rotifera · 9 ✖

tax_kingdom 1

  • Metazoa · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA554794 · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19647282 19647282 PRJNA554794_P_NODE_20916_length_187_cov_0.681159_g16987_i0 PRJNA554794 20916 187 0.681159 1.27376733 Brachionus falcatus 392765 Rotifera other_Eukaryota 152 1.5299999999999998e-32   NTclustered gi|2615504964|gb|OR601541.1| 392765 g16987 i0 84.713 47.331550802139 157 18 83 6 3 157 10384 10232 Brachionus falcatus chromosome 1 mitochondrion, complete sequence blastn 8851 152 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus falcatus
27078248 27078248 PRJNA554794_P_NODE_24742_length_161_cov_0.901786_g20813_i0 PRJNA554794 24742 161 0.901786 1.45187546 Adineta ricciae 249248 Rotifera other_Eukaryota 43.1 0.00856   NR CAF1620202.1 249248 g20813 i0 43.1 1.90062111801242 51 29 95 0 3 155 157 207 CAF1620202.1 unnamed protein product, partial [Adineta ricciae] diamond 306 43.1 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
27267842 27267842 PRJNA554794_P_NODE_20203_length_198_cov_1.033557_g16274_i0 PRJNA554794 20203 198 1.033557 2.04644286 Rotaria sp. Silwood1 2762511 Rotifera other_Eukaryota 55.8 1.12e-7   NR CAF1128076.1 2762511 g16274 i0 41 0.924242424242424 61 32 86.4 2 172 2 6 66 CAF1128076.1 unnamed protein product [Rotaria sp. Silwood1] diamond 183 55.8 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood1
28671981 28671981 PRJNA554794_P_NODE_22967_length_166_cov_0.863248_g19038_i0 PRJNA554794 22967 166 0.863248 1.43299168 Metazoa 33208 Rotifera other_Eukaryota 73.9 9.57e-14   NR RNA11224.1 10195 g19038 i0 64.8 3.90361445783133 54 19 97.6 0 164 3 188 241 RNA11224.1 cathepsin L [Brachionus plicatilis] diamond 648 73.9 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
28735045 28735045 PRJNA554794_P_NODE_14267_length_224_cov_1.434286_g10338_i0 PRJNA554794 14267 224 1.434286 3.21280064 root 1 Root_unresolved Root_unresolved 58.5 1.18e-8   NR CAF3790859.1 433720 g10338 i0 64.4 3.05357142857143 73 26 97.8 0 221 3 4 76 CAF3790859.1 unnamed protein product [Adineta steineri] diamond 684 58.9 0.99320882852292 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
30268120 30268120 PRJNA554794_P_NODE_14612_length_217_cov_1.761905_g10683_i0 PRJNA554794 14612 217 1.761905 3.82333385 Didymodactylos carnosus 1234261 Rotifera other_Eukaryota 45.8 0.00218   NR CAF1371257.1 1234261 g10683 i0 45.8 3.13824884792627 59 31 81.6 1 177 1 180 237 CAF1371257.1 unnamed protein product, partial [Didymodactylos carnosus] diamond 681 45.8 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Didymodactylos Didymodactylos carnosus
31135151 31135151 PRJNA554794_P_NODE_21215_length_183_cov_1.283582_g17286_i0 PRJNA554794 21215 183 1.283582 2.34895506 Metazoa 33208 Rotifera other_Eukaryota 104 3.15e-26   NR CAF1066595.1 249248 g17286 i0 78.7 59 61 13 100 0 183 1 133 193 CAF1066595.1 unnamed protein product [Adineta ricciae] diamond 10797 105 0.990476190476191 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
32069721 32069721 PRJNA554794_P_NODE_14138_length_227_cov_0.932584_g10209_i0 PRJNA554794 14138 227 0.932584 2.11696568 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 59.7 1.23e-8   NR CAF0950857.1 104777 g10209 i0 35.9 1.03083700440529 78 46 97.8 1 6 227 69 146 CAF0950857.1 unnamed protein product [Brachionus calyciflorus] diamond 234 59.7 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
32228134 32228134 PRJNA554794_P_NODE_19698_length_207_cov_1.272152_g15769_i0 PRJNA554794 19698 207 1.272152 2.63335464 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 52.4 9.13e-6   NR CAF0917748.1 104777 g15769 i0 42.3 5.23188405797101 52 30 75.4 0 52 207 30 81 CAF0917748.1 unnamed protein product [Brachionus calyciflorus] diamond 1083 52.4 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;