RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA554794", tax_kingdom = "Metazoa" and tax_phylum = "Nemertea"

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tax_superkingdom 1

tax_phylum 1

  • Nemertea · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA554794 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21525445 21525445 PRJNA554794_P_NODE_13797_length_236_cov_0.925134_g9868_i0 PRJNA554794 13797 236 0.925134 2.18331624 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 109 5.889999999999999e-28   NR ABZ04231.1 56195 g9868 i0 73.1 20.5677966101695 78 20 97.9 1 5 235 19 96 ABZ04231.1 ribosomal protein rpl18 [Lineus viridis] diamond 4854 110 0.990909090909091 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus viridis
29240202 29240202 PRJNA554794_P_NODE_23089_length_165_cov_1.051724_g19160_i0 PRJNA554794 23089 165 1.051724 1.7353446 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 66.6 3.76e-11   NR ABZ04250.1 56195 g19160 i0 61.1 4.92727272727273 54 21 98.2 0 165 4 206 259 ABZ04250.1 ribosomal protein rplp0 [Lineus viridis] diamond 813 66.6 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus viridis
30710082 30710082 PRJNA554794_P_NODE_19674_length_207_cov_2.886076_g15745_i0 PRJNA554794 19674 207 2.886076 5.97417732 Lineus longissimus 88925 Nemertea other_Eukaryota 112 5.28e-27   NR XP_064647997.1 88925 g15745 i0 67.6 4.31884057971014 68 22 98.6 0 204 1 2341 2408 XP_064647997.1 SCO-spondin-like isoform X1 [Lineus longissimus] diamond 894 112 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;