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contig_metadata

7 rows where bioproject = "PRJNA554794", tax_kingdom = "Metazoa" and tax_phylum = "Nematoda"

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tax_superkingdom 1

tax_phylum 1

  • Nematoda · 7 ✖

tax_kingdom 1

  • Metazoa · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA554794 · 7 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6227189 6227189 PRJNA554794_P_NODE_21505_length_179_cov_1.553846_g17576_i0 PRJNA554794 21505 179 1.553846 2.78138434 Rhabditida 6236 Nematoda Nematoda 75.1 7.71e-16   NR EPB69018.1 53326 g17576 i0 69.5 4.94413407821229 59 18 98.9 0 179 3 3 61 EPB69018.1 putative ribosomal protein L22 [Ancylostoma ceylanicum] diamond 885 75.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Ancylostoma Ancylostoma ceylanicum
22197845 22197845 PRJNA554794_P_NODE_9178_length_459_cov_0.787805_g5385_i0 PRJNA554794 9178 459 0.787805 3.61602495 Metazoa 33208 Nematoda Nematoda 214 1.6199999999999998e-67   NR KAK6031123.1 6317 g5385 i0 77.9 18.2679738562091 136 30 88.9 0 52 459 46 181 KAK6031123.1 ribosomal protein L5 [Ostertagia ostertagi] diamond 8385 215 0.995348837209302 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Ostertagia Ostertagia ostertagi
27362978 27362978 PRJNA554794_P_NODE_11783_length_299_cov_0.744000_g7854_i0 PRJNA554794 11783 299 0.744 2.22456 Aphelenchoides avenae 70226 Nematoda Nematoda 65.1 9.59e-10   NR KAH7723827.1 70226 g7854 i0 44.9 1.59531772575251 78 39 76.3 3 234 7 31 106 KAH7723827.1 cathepsin B-like cysteine protease 2 [Aphelenchoides avenae] diamond 477 65.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides avenae
27913908 27913908 PRJNA554794_P_NODE_23785_length_163_cov_0.956140_g19856_i0 PRJNA554794 23785 163 0.95614 1.5585082 Rhabditida 6236 Nematoda Nematoda 84 1.43e-17   NR KAE9419388.1 6313 g19856 i0 68.5 7.95092024539877 54 17 99.4 0 2 163 178 231 KAE9419388.1 hypothetical protein Angca_003340 [Angiostrongylus cantonensis] diamond 1296 84.7 0.991735537190083 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Metastrongylidae Angiostrongylus Angiostrongylus cantonensis
28387613 28387613 PRJNA554794_P_NODE_11926_length_293_cov_1.344262_g7997_i0 PRJNA554794 11926 293 1.344262 3.93868766 Rhabditida 6236 Nematoda Nematoda 140 2.48e-36   NR KHN74648.1 6265 g7997 i0 68 5.95904436860068 97 30 99.3 1 3 293 4 99 KHN74648.1 40S ribosomal protein S3a [Toxocara canis] diamond 1746 141 0.99290780141844 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
30061038 30061038 PRJNA554794_P_NODE_13411_length_246_cov_1.431472_g9482_i0 PRJNA554794 13411 246 1.431472 3.52142112 Opisthokonta 33154 Nematoda Nematoda 88.6 1.47e-19   NR CAD5209403.1 6326 g9482 i0 57.7 9.80487804878049 78 33 95.1 0 245 12 101 178 CAD5209403.1 unnamed protein product [Bursaphelenchus xylophilus] diamond 2412 88.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus xylophilus
30868062 30868062 PRJNA554794_P_NODE_24814_length_161_cov_0.866071_g20885_i0 PRJNA554794 24814 161 0.866071 1.39437431 Soboliphyme baturini 241478 Nematoda Nematoda 81.3 4.27e-18   NR VDO98973.1 241478 g20885 i0 83 0.987577639751553 53 9 98.8 0 3 161 18 70 VDO98973.1 unnamed protein product [Soboliphyme baturini] diamond 159 81.3 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Dioctophymatida Soboliphymatidae Soboliphyme Soboliphyme baturini

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;