RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA554794", tax_kingdom = "Metazoa" and tax_phylum = "Hemichordata"

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tax_superkingdom 1

tax_phylum 1

  • Hemichordata · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA554794 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18372621 18372621 PRJNA554794_P_NODE_10735_length_351_cov_0.758278_g6819_i0 PRJNA554794 10735 351 0.758278 2.66155578 Metazoa 33208 Hemichordata other_Eukaryota 156 2.59e-44   NR XP_006825592.1 10224 g6819 i0 62.9 39.6581196581197 116 39 99.1 1 349 2 37 148 XP_006825592.1 PREDICTED: 40S ribosomal protein SA-like [Saccoglossus kowalevskii] diamond 13920 157 0.993630573248408 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Harrimaniidae Saccoglossus Saccoglossus kowalevskii
29383556 29383556 PRJNA554794_P_NODE_21149_length_184_cov_0.874074_g17220_i0 PRJNA554794 21149 184 0.874074 1.60829616 Ptychodera flava 63121 Hemichordata other_Eukaryota 92.4 1.87e-21   NR XP_070534277.1 63121 g17220 i0 78.3 6.84782608695652 60 11 97.8 1 182 3 2 59 XP_070534277.1 small ribosomal subunit protein eS8-like [Ptychodera flava] diamond 1260 92.4 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava
30331525 30331525 PRJNA554794_P_NODE_23452_length_164_cov_0.886957_g19523_i0 PRJNA554794 23452 164 0.886957 1.45460948 Ptychodera flava 63121 Hemichordata other_Eukaryota 42 0.0239   NR XP_070555084.1 63121 g19523 i0 44.4 1.97560975609756 54 22 87.8 2 163 20 135 186 XP_070555084.1 von Willebrand factor D and EGF domain-containing protein-like [Ptychodera flava] diamond 324 42 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;