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contig_metadata

7 rows where bioproject = "PRJNA554794" and tax_clade = "Metamonada"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Metamonada · 7 ✖

bioproject 1

  • PRJNA554794 · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3674782 3674782 PRJNA554794_P_NODE_19563_length_208_cov_1.245283_g15634_i0 PRJNA554794 19563 208 1.245283 2.59018864 Monocercomonoides 302781 Preaxostyla other_Eukaryota 167 6.24e-37   NTclustered gi|156708135|gb|EF474125.1| 302782 g15634 i0 81.429 76.9663461538462 210 33 99 3 1 207 750 956 Monocercomonoides sp. PA clone 1/2 translation elongation factor-1 alpha mRNA, complete cds blastn 16009 167 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides sp. PA
28404684 28404684 PRJNA554794_P_NODE_13666_length_239_cov_1.931579_g9737_i0 PRJNA554794 13666 239 1.931579 4.61647381 Spironucleus salmonicida 348837 Fornicata other_Eukaryota 61.2 1.08e-8   NR XP_067766864.1 348837 g9737 i0 48.3 0.753138075313807 60 30 74.1 1 194 18 442 501 XP_067766864.1 Cysteine-rich membrane protein 2 [Spironucleus salmonicida] diamond 180 61.2 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Spironucleus Spironucleus salmonicida
29414955 29414955 PRJNA554794_P_NODE_20909_length_187_cov_0.949275_g16980_i0 PRJNA554794 20909 187 0.949275 1.77514425 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 54.7 1.08e-6   NR KAJ6235358.1 1746091 g16980 i0 54.5 1.41176470588235 44 20 70.6 0 55 186 18 61 KAJ6235358.1 glutamate dehydrogenase 1 [Anaeramoeba flamelloides] diamond 264 54.7 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
29698807 29698807 PRJNA554794_P_NODE_20150_length_199_cov_0.813333_g16221_i0 PRJNA554794 20150 199 0.813333 1.61853267 Spironucleus salmonicida 348837 Fornicata other_Eukaryota 112 7.97e-30   NR XP_067763597.1 348837 g16221 i0 76.9 0.979899497487437 65 15 98 0 3 197 14 78 XP_067763597.1 Nucleoside diphosphate kinase [Spironucleus salmonicida] diamond 195 112 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Spironucleus Spironucleus salmonicida
29983469 29983469 PRJNA554794_P_NODE_20791_length_189_cov_0.792857_g16862_i0 PRJNA554794 20791 189 0.792857 1.49849973 Hexamita inflata 28002 Fornicata other_Eukaryota 50.8 2.28e-5   NR CAK8775660.1 28002 g16862 i0 51 0.777777777777778 49 19 77.8 2 167 21 143 186 CAK8775660.1 HINF_040625 [Hexamita inflata] diamond 147 50.8 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
31831042 31831042 PRJNA554794_P_NODE_21957_length_174_cov_1.304000_g18028_i0 PRJNA554794 21957 174 1.304 2.26896 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 60.5 8.38e-9   NR ESU40633.1 5741 g18028 i0 56.5 3.48275862068966 46 17 79.3 1 28 165 356 398 ESU40633.1 Variant-specific surface protein, partial [Giardia intestinalis] diamond 606 60.5 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
32228133 32228133 PRJNA554794_P_NODE_14558_length_218_cov_1.461538_g10629_i0 PRJNA554794 14558 218 1.461538 3.18615284 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 77.4 2.14e-16   NR KAJ5073591.1 1746090 g10629 i0 60.3 0.86697247706422 63 25 86.7 0 29 217 8 70 KAJ5073591.1 ribosomal protein L35A [Anaeramoeba ignava] diamond 189 77.4 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;