RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA554794" and tax_clade = "Haptista"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Haptista · 4 ✖

bioproject 1

  • PRJNA554794 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4347984 4347984 PRJNA554794_P_NODE_13264_length_250_cov_1.174129_g9335_i0 PRJNA554794 13264 250 1.174129 2.9353225 Diacronema lutheri 2081491 Haptophyta other_Eukaryota 91.3 1.03e-21   NR KAG8469654.1 2081491 g9335 i0 65.8 2.892 79 27 94.8 0 239 3 8 86 KAG8469654.1 hypothetical protein KFE25_006109 [Diacronema lutheri] diamond 723 91.3 1 Eukaryota Haptista   Haptophyta Pavlovophyceae Pavlovales Pavlovaceae Diacronema Diacronema lutheri
28689074 28689074 PRJNA554794_P_NODE_20647_length_191_cov_0.669014_g16718_i0 PRJNA554794 20647 191 0.669014 1.27781674 Pavlovales sp. CCMP2436 483367 Haptophyta other_Eukaryota 93.2 6.1900000000000006e-21   NR KAJ1620885.1 483367 g16718 i0 73 2.93717277486911 63 17 99 0 1 189 86 148 KAJ1620885.1 small nucleolar RNA, C/D box 21 [Pavlovales sp. CCMP2436] diamond 561 93.2 1 Eukaryota Haptista   Haptophyta Pavlovophyceae Pavlovales     Pavlovales sp. CCMP2436
31974838 31974838 PRJNA554794_P_NODE_23198_length_165_cov_0.879310_g19269_i0 PRJNA554794 23198 165 0.87931 1.4508615 Diacronema lutheri 2081491 Haptophyta other_Eukaryota 45.4 0.00127   NR KAG8460833.1 2081491 g19269 i0 50 1.54545454545455 46 23 83.6 0 160 23 183 228 KAG8460833.1 hypothetical protein KFE25_010888 [Diacronema lutheri] diamond 255 45.4 1 Eukaryota Haptista   Haptophyta Pavlovophyceae Pavlovales Pavlovaceae Diacronema Diacronema lutheri
32827886 32827886 PRJNA554794_P_NODE_23440_length_164_cov_0.956522_g19511_i0 PRJNA554794 23440 164 0.956522 1.56869608 Diacronema lutheri 2081491 Haptophyta other_Eukaryota 57 3.06e-8   NR KAG8461003.1 2081491 g19511 i0 50.9 1.9390243902439 53 25 97 1 5 163 73 124 KAG8461003.1 hypothetical protein KFE25_010754 [Diacronema lutheri] diamond 318 57 1 Eukaryota Haptista   Haptophyta Pavlovophyceae Pavlovales Pavlovaceae Diacronema Diacronema lutheri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;