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contig_metadata

33 rows where bioproject = "PRJNA554794" and tax_clade = "Amoebozoa"

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tax_phylum 3

analysis 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 33 ✖

bioproject 1

  • PRJNA554794 · 33 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2398730 2398730 PRJNA554794_P_NODE_11502_length_312_cov_0.893536_g7574_i0 PRJNA554794 11502 312 0.893536 2.78783232 Evosea 2605435 Evosea other_Eukaryota 149 1.31e-43   NR KAF2072588.1 133409 g7574 i0 71.7 6.66346153846154 99 28 95.2 0 297 1 1 99 KAF2072588.1 hypothetical protein CYY_006111 [Polysphondylium violaceum] diamond 2079 150 0.993333333333333 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
3071857 3071857 PRJNA554794_P_NODE_20983_length_186_cov_1.080292_g17054_i0 PRJNA554794 20983 186 1.080292 2.00934312 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 169 1.5099999999999998e-37   NTclustered gi|62910949|gb|AY925001.1| 5778 g17054 i0 97 0.763440860215054 100 3 54 0 87 186 1 100 Hartmannella vermiformis Rpl7A mRNA, partial cds blastn 142 169 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
10725037 10725037 PRJNA554794_P_NODE_10589_length_359_cov_1.087097_g6682_i0 PRJNA554794 10589 359 1.087097 3.90267823 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 196 9.16e-59   NR PRP83118.1 1890364 g6682 i0 75.6 4.97214484679666 119 29 99.4 0 1 357 231 349 PRP83118.1 60S ribosomal protein L3 [Planoprotostelium fungivorum] diamond 1785 196 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
10725093 10725093 PRJNA554794_P_NODE_21229_length_183_cov_0.820896_g17300_i0 PRJNA554794 21229 183 0.820896 1.50223968 Vannella samoroda 2591203 Discosea other_Eukaryota 233 5.19e-57   NTclustered gi|1768465994|gb|MK992744.1| 2591203 g17300 i0 92.593 96.6010928961749 162 12 89 0 22 183 788 627 Vannella samoroda strain RC CCMAm 0457 clone 2 actin gene, partial cds blastn 17678 233 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella samoroda
13274907 13274907 PRJNA554794_P_NODE_11951_length_292_cov_1.374486_g8022_i0 PRJNA554794 11951 292 1.374486 4.01349912 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 87.4 6.95e-20   NR KYQ92458.1 361077 g8022 i0 53.3 1.84931506849315 90 40 92.5 1 20 289 1 88 KYQ92458.1 40S ribosomal protein S25 [Tieghemostelium lacteum] diamond 540 87.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
14549995 14549995 PRJNA554794_P_NODE_9632_length_423_cov_5.860963_g2142_i1 PRJNA554794 9632 423 5.860963 24.79187349 Dictyostelium discoideum 44689 Evosea other_Eukaryota 542 1.98e-149   NTclustered gi|66805384|ref|XM_631333.1| 352472 g2142 i1 89.976 96.8841607565012 419 42 99 0 3 421 1124 706 Dictyostelium discoideum AX4 hypothetical protein (act4) mRNA, complete cds blastn 40982 542 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
17098482 17098482 PRJNA554794_P_NODE_13894_length_233_cov_0.994565_g9965_i0 PRJNA554794 13894 233 0.994565 2.31733645 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 85.1 4.19e-19   NR XP_004352877.1 1257118 g9965 i0 68.3 2.48497854077253 63 20 81.1 0 43 231 3 65 XP_004352877.1 ribosomal protein s24e, putative [Acanthamoeba castellanii str. Neff] diamond 579 85.9 0.990686845168801 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
20923063 20923063 PRJNA554794_P_NODE_14777_length_215_cov_0.626506_g10848_i0 PRJNA554794 14777 215 0.626506 1.3469879 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 134 2.09e-34   NR XP_012753483.1 1410327 g10848 i0 88.7 6.90697674418605 71 8 99.1 0 214 2 496 566 XP_012753483.1 hypothetical protein SAMD00019534_069170 [Acytostelium subglobosum LB1] diamond 1485 134 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
20923098 20923098 PRJNA554794_P_NODE_21617_length_178_cov_0.914729_g17688_i0 PRJNA554794 21617 178 0.914729 1.62821762 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 296 6.3e-76   NTclustered gi|62910949|gb|AY925001.1| 5778 g17688 i0 96.629 1.56179775280899 178 6 100 0 1 178 455 278 Hartmannella vermiformis Rpl7A mRNA, partial cds blastn 278 296 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
22197802 22197802 PRJNA554794_P_NODE_20778_length_189_cov_1.207143_g16849_i0 PRJNA554794 20778 189 1.207143 2.28150027 Acytostelium subglobosum 361139 Evosea other_Eukaryota 54.7 0.005   NTclustered gi|831773671|ref|XM_012898527.1| 1410327 g16849 i0 100 0.153439153439153 29 0 15 0 149 177 551 523 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 29 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
23473393 23473393 PRJNA554794_P_NODE_24439_length_162_cov_0.752212_g20510_i0 PRJNA554794 24439 162 0.752212 1.21858344 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 60.1 7.55e-9   NR XP_003287614.1 5786 g20510 i0 59.6 3.05555555555556 52 16 96.3 1 161 6 248 294 XP_003287614.1 calcium-regulated actin-bundling protein [Dictyostelium purpureum] diamond 495 60.5 0.993388429752066 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
23473398 23473398 PRJNA554794_P_NODE_4839_length_1058_cov_1.518335_g2115_i0 PRJNA554794 4839 1058 1.518335 16.0639843 Cavenderia fasciculata 261658 Evosea other_Eukaryota 606 1.8299999999999992e-168   NTclustered gi|470260760|ref|XM_004360149.1| 261658 g2115 i0 77.63 54.8412098298677 1055 198 97 23 4 1026 1049 1 Cavenderia fasciculata elongation factor 1 alpha (efaAI), partial mRNA blastn 58022 606 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
24747102 24747102 PRJNA554794_P_NODE_10320_length_376_cov_1.311927_g6431_i0 PRJNA554794 10320 376 1.311927 4.93284552 Ripella tribonemae 2047823 Discosea other_Eukaryota 606 6.089999999999998e-169   NTclustered gi|1269228471|gb|MF683596.1| 2047823 g6431 i0 97.479 92.4148936170213 357 5 94 4 23 376 676 1031 Ripella tribonemae clone 22.1.14 18S ribosomal RNA gene, partial sequence blastn 34748 606 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella tribonemae
24747117 24747117 PRJNA554794_P_NODE_13420_length_246_cov_0.746193_g9491_i0 PRJNA554794 13420 246 0.746193 1.83563478 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 416 6.839999999999999e-112   NTclustered gi|62910949|gb|AY925001.1| 5778 g9491 i0 97.154 2.34146341463415 246 7 100 0 1 246 731 486 Hartmannella vermiformis Rpl7A mRNA, partial cds blastn 576 416 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
26698243 26698243 PRJNA554794_P_NODE_24821_length_161_cov_0.839286_g20892_i0 PRJNA554794 24821 161 0.839286 1.35125046 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 72.8 2.11e-13   NR XP_004336616.1 1257118 g20892 i0 62.3 4.7888198757764 53 20 98.8 0 3 161 7 59 XP_004336616.1 ribosomal protein L10, putative [Acanthamoeba castellanii str. Neff] diamond 771 72.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27267844 27267844 PRJNA554794_P_NODE_24043_length_163_cov_0.877193_g20114_i0 PRJNA554794 24043 163 0.877193 1.42982459 Dictyostelium purpureum 5786 Evosea other_Eukaryota 58.9 2.45e-8   NR XP_003291358.1 5786 g20114 i0 57.4 0.993865030674847 54 23 99.4 0 1 162 376 429 XP_003291358.1 actin binding protein [Dictyostelium purpureum] diamond 162 58.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
27457655 27457655 PRJNA554794_P_NODE_15143_length_211_cov_1.469136_g11214_i0 PRJNA554794 15143 211 1.469136 3.09987696 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 57.4 5.61e-8   NR KAH3757229.1 1580589 g11214 i0 65.1 0.611374407582938 43 15 61.1 0 175 47 46 88 KAH3757229.1 hypothetical protein Pelo_10959 [Pelomyxa schiedti] diamond 129 57.4 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
27472149 27472149 PRJNA554794_P_NODE_9943_length_402_cov_1.291785_g6076_i0 PRJNA554794 9943 402 1.291785 5.1929757 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 170 5.939999999999999e-52   NR 1PRQ_A 5755 g6076 i0 64.8 2.8134328358209 125 44 93.3 0 20 394 1 125 1PRQ_A Chain A, PROFILIN IA [Acanthamoeba castellanii] diamond 1131 170 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28562639 28562639 PRJNA554794_P_NODE_21627_length_178_cov_0.790698_g17698_i0 PRJNA554794 21627 178 0.790698 1.40744244 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 63.5 6.69e-10   NR PRP77394.1 1890364 g17698 i0 40.4 0.960674157303371 57 34 96.1 0 6 176 295 351 PRP77394.1 hypothetical protein PROFUN_14400 [Planoprotostelium fungivorum] diamond 171 63.5 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
28956237 28956237 PRJNA554794_P_NODE_19568_length_208_cov_1.163522_g15639_i0 PRJNA554794 19568 208 1.163522 2.42012576 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 92 9.61e-22   NR XP_004341583.1 1257118 g15639 i0 74.1 1.6875 58 15 83.7 0 28 201 11 68 XP_004341583.1 ribosomal protein S9, putative [Acanthamoeba castellanii str. Neff] diamond 351 92.8 0.991379310344828 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29067878 29067878 PRJNA554794_P_NODE_21708_length_177_cov_0.757812_g17779_i0 PRJNA554794 21708 177 0.757812 1.34132724 Polysphondylium violaceum 133409 Evosea other_Eukaryota 66.2 8.03e-11   NR KAF2070099.1 133409 g17779 i0 56.9 1.96610169491525 58 24 98.3 1 177 4 59 115 KAF2070099.1 hypothetical protein CYY_008583 [Polysphondylium violaceum] diamond 348 66.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
29194180 29194180 PRJNA554794_P_NODE_14329_length_223_cov_0.977011_g10400_i0 PRJNA554794 14329 223 0.977011 2.17873453 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 132 2.6000000000000002e-37   NR XP_004368153.1 1257118 g10400 i0 84.9 4.91031390134529 73 10 98.2 1 221 3 55 126 XP_004368153.1 ribosomal protein S17, putative [Acanthamoeba castellanii str. Neff] diamond 1095 132 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29256948 29256948 PRJNA554794_P_NODE_19809_length_205_cov_0.801282_g15880_i0 PRJNA554794 19809 205 0.801282 1.6426281 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 94.7 1.35e-23   NR PRP85004.1 1890364 g15880 i0 76.4 2.61951219512195 55 13 80.5 0 171 7 5 59 PRP85004.1 hypothetical protein PROFUN_07292 [Planoprotostelium fungivorum] diamond 537 94.7 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
29477868 29477868 PRJNA554794_P_NODE_24590_length_161_cov_0.910714_g20661_i0 PRJNA554794 24590 161 0.910714 1.46624954 Entamoeba invadens IP1 370355 Evosea other_Eukaryota 43.1 0.0091   NR XP_004258661.1 370355 g20661 i0 72.7 0.409937888198758 22 6 41 0 150 85 818 839 XP_004258661.1 protein serine/threonine kinase, putative [Entamoeba invadens IP1] diamond 66 43.1 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba invadens
29667279 29667279 PRJNA554794_P_NODE_14970_length_213_cov_2.585366_g11041_i0 PRJNA554794 14970 213 2.585366 5.50682958 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 91.3 9.04e-21   NR XP_004337597.1 1257118 g11041 i0 61.4 0.985915492957746 70 24 98.6 2 1 210 21 87 XP_004337597.1 uncharacterized protein ACA1_164640 [Acanthamoeba castellanii str. Neff] diamond 210 91.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29745105 29745105 PRJNA554794_P_NODE_11170_length_328_cov_0.637993_g7244_i0 PRJNA554794 11170 328 0.637993 2.09261704 Eumycetozoa 142796 Evosea other_Eukaryota 66.6 4.19e-10   NR XP_004350707.1 261658 g7244 i0 39.7 2.1219512195122 116 49 99.7 5 328 2 519 620 XP_004350707.1 uncharacterized protein DFA_11760 [Cavenderia fasciculata] diamond 696 66.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
30092641 30092641 PRJNA554794_P_NODE_13332_length_248_cov_0.763819_g9403_i0 PRJNA554794 13332 248 0.763819 1.89427112 Acytosteliales 2058181 Evosea other_Eukaryota 137 8e-38   NR XP_004355894.1 261658 g9403 i0 89 3.97983870967742 82 8 99.2 1 246 1 164 244 XP_004355894.1 actin bundling protein [Cavenderia fasciculata] diamond 987 138 0.992753623188406 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
30236209 30236209 PRJNA554794_P_NODE_21792_length_176_cov_1.031496_g17863_i0 PRJNA554794 21792 176 1.031496 1.81543296 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 64.7 2.03e-11   NR XP_004348720.1 1257118 g17863 i0 54.5 1.77272727272727 55 25 93.8 0 173 9 74 128 XP_004348720.1 actin binding protein [Acanthamoeba castellanii str. Neff] diamond 312 64.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30331524 30331524 PRJNA554794_P_NODE_14452_length_220_cov_0.836257_g10523_i0 PRJNA554794 14452 220 0.836257 1.8397654 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 71.2 2.25e-13   NR XP_004344009.1 1257118 g10523 i0 68.6 0.695454545454545 51 16 69.5 0 67 219 9 59 XP_004344009.1 Vtype ATPase, C subunit [Acanthamoeba castellanii str. Neff] diamond 153 71.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30426241 30426241 PRJNA554794_P_NODE_23993_length_163_cov_0.885965_g20064_i0 PRJNA554794 23993 163 0.885965 1.44412295 Dictyostelium discoideum AX4 352472 Evosea other_Eukaryota 73.6 8.29e-15   NR XP_639901.1 352472 g20064 i0 58.3 0.883435582822086 48 20 88.3 0 6 149 60 107 XP_639901.1 ubiquitin-conjugating enzyme E2 [Dictyostelium discoideum AX4] diamond 144 73.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
31563865 31563865 PRJNA554794_P_NODE_24036_length_163_cov_0.877193_g20107_i0 PRJNA554794 24036 163 0.877193 1.42982459 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 93.2 1.68e-21   NR PRP82908.1 1890364 g20107 i0 81.5 2.98159509202454 54 10 99.4 0 163 2 65 118 PRP82908.1 40S ribosomal protein S6 [Planoprotostelium fungivorum] diamond 486 93.2 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
31974837 31974837 PRJNA554794_P_NODE_11098_length_332_cov_1.703180_g7172_i0 PRJNA554794 11098 332 1.70318 5.6545576 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 116 4.55e-30   NR PRP86688.1 1890364 g7172 i0 53.6 0.993975903614458 110 49 97.6 2 326 3 78 187 PRP86688.1 hypothetical protein PROFUN_05167 [Planoprotostelium fungivorum] diamond 330 116 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32638624 32638624 PRJNA554794_P_NODE_15060_length_212_cov_0.926380_g11131_i0 PRJNA554794 15060 212 0.92638 1.9639256 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 84.7 3.98e-17   NR XP_004335836.1 1257118 g11131 i0 54.4 0.962264150943396 68 29 93.4 1 13 210 35 102 XP_004335836.1 uncharacterized protein ACA1_076760 [Acanthamoeba castellanii str. Neff] diamond 204 84.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;